RNA–Protein interactions for RNA: ENSMUST00000047830.7

Hoxd3-201, Transcript of Homeobox protein Hox-D3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Hoxd3, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3-201ENSMUST00000047830 NischQ80TM9 1593 aa34.83■■■■□ 3.17
Hoxd3-201ENSMUST00000047830 Gm35339A0A140LHH9 1649 aa34.18■■■■□ 3.06
Hoxd3-201ENSMUST00000047830 Abcc9P70170 1546 aa33.98■■■■□ 3.03
Hoxd3-201ENSMUST00000047830 Rtl1Q7M732 1744 aa33.56■■■□□ 2.96
Hoxd3-201ENSMUST00000047830 Ccdc180J3QNE4 1664 aa32.96■■■□□ 2.87
Hoxd3-201ENSMUST00000047830 Abcc8B2RUS7 1588 aa32.95■■■□□ 2.86
Hoxd3-201ENSMUST00000047830 Rpgrip1Q9EPQ2 1331 aa32.63■■■□□ 2.81
Hoxd3-201ENSMUST00000047830 Rhox8Q6VSS7 320 aa32.56■■■□□ 2.8
Hoxd3-201ENSMUST00000047830 Zcchc6Q5BLK4 1491 aaKnown RBP31.87■■■□□ 2.69
Hoxd3-201ENSMUST00000047830 Acin1Q9JIX8 1338 aaKnown RBP31.5■■■□□ 2.63
Hoxd3-201ENSMUST00000047830 ScribQ80U72 1612 aa31.4■■■□□ 2.62
Hoxd3-201ENSMUST00000047830 HrcG5E8J6 738 aa31.27■■■□□ 2.6
Hoxd3-201ENSMUST00000047830 Dcaf1Q80TR8 1506 aa31.2■■■□□ 2.58
Hoxd3-201ENSMUST00000047830 Rb1cc1Q9ESK9 1588 aa30.55■■■□□ 2.48
Hoxd3-201ENSMUST00000047830 Kdm5dQ62240 1548 aa30.5■■■□□ 2.47
Hoxd3-201ENSMUST00000047830 Pcgf6Q99NA9 353 aa30.44■■■□□ 2.46
Hoxd3-201ENSMUST00000047830 Baz1aO88379 1555 aa30.34■■■□□ 2.45
Hoxd3-201ENSMUST00000047830 NacadQ5SWP3 1504 aa30.33■■■□□ 2.45
Hoxd3-201ENSMUST00000047830 Ehmt2Q9Z148 1263 aaKnown RBP30.19■■■□□ 2.42
Hoxd3-201ENSMUST00000047830 Trim41Q5NCC3 630 aa30.06■■■□□ 2.4
Hoxd3-201ENSMUST00000047830 Ccdc136Q3TVA9 1136 aa30.04■■■□□ 2.4
Hoxd3-201ENSMUST00000047830 Cep164Q5DU05 1446 aa30.02■■■□□ 2.4
Hoxd3-201ENSMUST00000047830 Crybg2B7ZCC2 1516 aa29.89■■■□□ 2.38
Hoxd3-201ENSMUST00000047830 Sycp2Q9CUU3 1500 aa29.76■■■□□ 2.36
Hoxd3-201ENSMUST00000047830 Smarca2Q6DIC0 1577 aa29.73■■■□□ 2.35
Hoxd3-201ENSMUST00000047830 Supt5hO55201 1082 aaKnown RBP29.6■■■□□ 2.33
Hoxd3-201ENSMUST00000047830 NefmP08553 848 aa29.37■■■□□ 2.29
Hoxd3-201ENSMUST00000047830 BicraF8VPZ9 1578 aa29.36■■■□□ 2.29
Hoxd3-201ENSMUST00000047830 Neurod1Q60867 357 aa29.19■■■□□ 2.26
Hoxd3-201ENSMUST00000047830 Las1lA2BE28 776 aaKnown RBP29.15■■■□□ 2.26
Hoxd3-201ENSMUST00000047830 Rsf1E9PWW9 1441 aaKnown RBP29.14■■■□□ 2.26
Hoxd3-201ENSMUST00000047830 Brd4Q9ESU6 1400 aaKnown RBP29.04■■■□□ 2.24
Hoxd3-201ENSMUST00000047830 Golga3P55937 1487 aa28.94■■■□□ 2.22
Hoxd3-201ENSMUST00000047830 Cngb1E1AZ71 1325 aa28.93■■■□□ 2.22
Hoxd3-201ENSMUST00000047830 Chic1Q8CBW7 227 aa28.93■■■□□ 2.22
Hoxd3-201ENSMUST00000047830 Mier1Q5UAK0 511 aa28.89■■■□□ 2.22
Hoxd3-201ENSMUST00000047830 Ccdc88bQ4QRL3 1481 aa28.81■■■□□ 2.2
Hoxd3-201ENSMUST00000047830 Zeb1Q64318 1117 aa28.8■■■□□ 2.2
Hoxd3-201ENSMUST00000047830 Anks4bQ8K3X6 423 aa28.78■■■□□ 2.2
Hoxd3-201ENSMUST00000047830 Sall2Q9QX96 1004 aa28.73■■■□□ 2.19
Hoxd3-201ENSMUST00000047830 Gab3Q8BSM5 595 aa28.65■■■□□ 2.18
Hoxd3-201ENSMUST00000047830 Top2bQ64511 1612 aa28.58■■■□□ 2.17
Hoxd3-201ENSMUST00000047830 Synj1Q8CHC4 1574 aa28.58■■■□□ 2.17
Hoxd3-201ENSMUST00000047830 Cecr2E9Q2Z1 1453 aa28.55■■■□□ 2.16
Hoxd3-201ENSMUST00000047830 CftrP26361 1476 aa28.39■■■□□ 2.14
Hoxd3-201ENSMUST00000047830 Myt1Q8CFC2 1127 aa28.38■■■□□ 2.13
Hoxd3-201ENSMUST00000047830 1700123L14RikQ3V2K7 440 aa28.35■■■□□ 2.13
Hoxd3-201ENSMUST00000047830 Rapgef2Q8CHG7 1496 aa28.35■■■□□ 2.13
Hoxd3-201ENSMUST00000047830 ClspnQ80YR7 1315 aa28.3■■■□□ 2.12
Hoxd3-201ENSMUST00000047830 Cttnbp2B9EJA2 1648 aa28.28■■■□□ 2.12
Hoxd3-201ENSMUST00000047830 Aplp2Q06335 707 aa28.26■■■□□ 2.11
Hoxd3-201ENSMUST00000047830 Pds5bQ4VA53 1446 aaKnown RBP28.23■■■□□ 2.11
Hoxd3-201ENSMUST00000047830 Cdk11bP24788 784 aaKnown RBP28.2■■■□□ 2.1
Hoxd3-201ENSMUST00000047830 Csrnp3P59055 597 aa28.16■■■□□ 2.1
Hoxd3-201ENSMUST00000047830 Smarca4Q3TKT4 1613 aaKnown RBP28.15■■■□□ 2.1
Hoxd3-201ENSMUST00000047830 Atad2bE9Q166 1460 aaKnown RBP28.13■■■□□ 2.09
Hoxd3-201ENSMUST00000047830 Aebp2Q9Z248 504 aaKnown RBP28.1■■■□□ 2.09
Hoxd3-201ENSMUST00000047830 Nop58Q6DFW4 536 aaKnown RBP28.09■■■□□ 2.09
Hoxd3-201ENSMUST00000047830 Fmn1Q05860 1466 aa28.09■■■□□ 2.09
Hoxd3-201ENSMUST00000047830 Top2aQ01320 1528 aaKnown RBP28.08■■■□□ 2.09
Hoxd3-201ENSMUST00000047830 Cc2d2aQ8CFW7 1633 aa28.05■■■□□ 2.08
Hoxd3-201ENSMUST00000047830 Wdr66E9Q743 1299 aa28.04■■■□□ 2.08
Hoxd3-201ENSMUST00000047830 Dnajc5bQ9CQ94 199 aa28.03■■■□□ 2.08
Hoxd3-201ENSMUST00000047830 Esf1Q3V1V3 845 aaKnown RBP28.02■■■□□ 2.08
Hoxd3-201ENSMUST00000047830 UbtfP25976 765 aaKnown RBP28.01■■■□□ 2.07
Hoxd3-201ENSMUST00000047830 Cep162Q6ZQ06 1403 aa28.01■■■□□ 2.07
Hoxd3-201ENSMUST00000047830 Iqgap2Q3UQ44 1575 aa27.97■■■□□ 2.07
Hoxd3-201ENSMUST00000047830 CenpbP27790 599 aa27.96■■■□□ 2.07
Hoxd3-201ENSMUST00000047830 TonslQ6NZL6 1363 aa27.91■■■□□ 2.06
Hoxd3-201ENSMUST00000047830 Eif4g1Q6NZJ6 1600 aaKnown RBP27.84■■■□□ 2.05
Hoxd3-201ENSMUST00000047830 Ncapd3Q6ZQK0 1506 aa27.81■■■□□ 2.04
Hoxd3-201ENSMUST00000047830 Thoc2B1AZI6 1594 aaKnown RBP27.8■■■□□ 2.04
Hoxd3-201ENSMUST00000047830 Ercc6F8VPZ5 1481 aa27.68■■■□□ 2.02
Hoxd3-201ENSMUST00000047830 Frmpd1A2AKB4 1549 aa27.65■■■□□ 2.02
Hoxd3-201ENSMUST00000047830 Clip1Q922J3 1391 aa27.64■■■□□ 2.01
Hoxd3-201ENSMUST00000047830 Wdr62Q3U3T8 1523 aa27.61■■■□□ 2.01
Hoxd3-201ENSMUST00000047830 Tnnt3Q9QZ47 272 aa27.53■■■□□ 2
Hoxd3-201ENSMUST00000047830 Kdm5bQ80Y84 1544 aa27.48■■□□□ 1.99
Hoxd3-201ENSMUST00000047830 Myt1lP97500 1187 aa27.46■■□□□ 1.99
Hoxd3-201ENSMUST00000047830 TnnQ80Z71 1560 aa27.44■■□□□ 1.98
Hoxd3-201ENSMUST00000047830 Ccdc18Q640L5 1455 aa27.42■■□□□ 1.98
Hoxd3-201ENSMUST00000047830 TchhA0A0B4J1F9 1599 aa27.37■■□□□ 1.97
Hoxd3-201ENSMUST00000047830 Npm2Q80W85 207 aa27.36■■□□□ 1.97
Hoxd3-201ENSMUST00000047830 NrkQ9R0G8 1455 aa27.33■■□□□ 1.97
Hoxd3-201ENSMUST00000047830 Arhgap35Q91YM2 1499 aa27.33■■□□□ 1.97
Hoxd3-201ENSMUST00000047830 Eea1Q8BL66 1411 aa27.31■■□□□ 1.96
Hoxd3-201ENSMUST00000047830 Plekhg3Q4VAC9 1341 aa27.3■■□□□ 1.96
Hoxd3-201ENSMUST00000047830 Arhgef5E9Q7D5 1581 aa27.28■■□□□ 1.96
Hoxd3-201ENSMUST00000047830 Unc13aQ4KUS2 1712 aa27.27■■□□□ 1.96
Hoxd3-201ENSMUST00000047830 Phldb1Q6PDH0 1371 aaKnown RBP27.26■■□□□ 1.95
Hoxd3-201ENSMUST00000047830 Arap1Q4LDD4 1452 aa27.26■■□□□ 1.95
Hoxd3-201ENSMUST00000047830 Ppargc1bQ8VHJ7 1014 aa27.25■■□□□ 1.95
Hoxd3-201ENSMUST00000047830 Fam135aQ6NS59 1506 aa27.25■■□□□ 1.95
Hoxd3-201ENSMUST00000047830 Map3k1P53349 1493 aa27.21■■□□□ 1.95
Hoxd3-201ENSMUST00000047830 Ubl4bQ9CQ84 188 aa27.18■■□□□ 1.94
Hoxd3-201ENSMUST00000047830 Baz1bQ9Z277 1479 aa27.14■■□□□ 1.94
Hoxd3-201ENSMUST00000047830 Tiam1Q60610 1591 aa27.1■■□□□ 1.93
Hoxd3-201ENSMUST00000047830 Stra8P70278 393 aa27.1■■□□□ 1.93
Hoxd3-201ENSMUST00000047830 Hnrnpul2Q00PI9 745 aaKnown RBP27.06■■□□□ 1.92
Hoxd3-201ENSMUST00000047830 Erich3F6QRE9 1637 aa27.02■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms