RNA–Protein interactions for RNA: ENSMUST00000047242.8

Traf3ip1-201, Transcript of TRAF3-interacting protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Traf3ip1, Length 3,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3ip1-201ENSMUST00000047242 NischQ80TM9 1593 aa28.92■■■□□ 2.22
Traf3ip1-201ENSMUST00000047242 Gm35339A0A140LHH9 1649 aa28.17■■■□□ 2.1
Traf3ip1-201ENSMUST00000047242 Abcc9P70170 1546 aa27.93■■■□□ 2.06
Traf3ip1-201ENSMUST00000047242 Abcc8B2RUS7 1588 aa27.47■■□□□ 1.99
Traf3ip1-201ENSMUST00000047242 Rhox8Q6VSS7 320 aa27.1■■□□□ 1.93
Traf3ip1-201ENSMUST00000047242 ScribQ80U72 1612 aa25.82■■□□□ 1.72
Traf3ip1-201ENSMUST00000047242 Rtl1Q7M732 1744 aa25.47■■□□□ 1.67
Traf3ip1-201ENSMUST00000047242 Rb1cc1Q9ESK9 1588 aa25.33■■□□□ 1.64
Traf3ip1-201ENSMUST00000047242 Kdm5dQ62240 1548 aa25.3■■□□□ 1.64
Traf3ip1-201ENSMUST00000047242 Ccdc136Q3TVA9 1136 aa25.25■■□□□ 1.63
Traf3ip1-201ENSMUST00000047242 Dcaf1Q80TR8 1506 aa25.23■■□□□ 1.63
Traf3ip1-201ENSMUST00000047242 Ccdc180J3QNE4 1664 aa25.16■■□□□ 1.62
Traf3ip1-201ENSMUST00000047242 Ehmt2Q9Z148 1263 aaKnown RBP25.14■■□□□ 1.61
Traf3ip1-201ENSMUST00000047242 Zcchc6Q5BLK4 1491 aaKnown RBP25.03■■□□□ 1.6
Traf3ip1-201ENSMUST00000047242 NacadQ5SWP3 1504 aa25■■□□□ 1.59
Traf3ip1-201ENSMUST00000047242 Baz1aO88379 1555 aa24.91■■□□□ 1.58
Traf3ip1-201ENSMUST00000047242 Sycp2Q9CUU3 1500 aa24.5■■□□□ 1.51
Traf3ip1-201ENSMUST00000047242 Rpgrip1Q9EPQ2 1331 aa24.34■■□□□ 1.49
Traf3ip1-201ENSMUST00000047242 Smarca2Q6DIC0 1577 aa24.31■■□□□ 1.48
Traf3ip1-201ENSMUST00000047242 Trim41Q5NCC3 630 aa24.29■■□□□ 1.48
Traf3ip1-201ENSMUST00000047242 Crybg2B7ZCC2 1516 aa24.24■■□□□ 1.47
Traf3ip1-201ENSMUST00000047242 HrcG5E8J6 738 aa24.19■■□□□ 1.46
Traf3ip1-201ENSMUST00000047242 Acin1Q9JIX8 1338 aaKnown RBP24.19■■□□□ 1.46
Traf3ip1-201ENSMUST00000047242 Cecr2E9Q2Z1 1453 aa24.14■■□□□ 1.45
Traf3ip1-201ENSMUST00000047242 Cngb1E1AZ71 1325 aa24.1■■□□□ 1.45
Traf3ip1-201ENSMUST00000047242 BicraF8VPZ9 1578 aa24.09■■□□□ 1.45
Traf3ip1-201ENSMUST00000047242 Gab3Q8BSM5 595 aa23.85■■□□□ 1.41
Traf3ip1-201ENSMUST00000047242 Chic1Q8CBW7 227 aa23.85■■□□□ 1.41
Traf3ip1-201ENSMUST00000047242 Esf1Q3V1V3 845 aaKnown RBP23.82■■□□□ 1.4
Traf3ip1-201ENSMUST00000047242 Brd4Q9ESU6 1400 aaKnown RBP23.78■■□□□ 1.4
Traf3ip1-201ENSMUST00000047242 Synj1Q8CHC4 1574 aa23.75■■□□□ 1.39
Traf3ip1-201ENSMUST00000047242 Rsf1E9PWW9 1441 aaKnown RBP23.65■■□□□ 1.38
Traf3ip1-201ENSMUST00000047242 Pcgf6Q99NA9 353 aa23.6■■□□□ 1.37
Traf3ip1-201ENSMUST00000047242 Cep164Q5DU05 1446 aa23.59■■□□□ 1.37
Traf3ip1-201ENSMUST00000047242 Ccdc88bQ4QRL3 1481 aa23.57■■□□□ 1.36
Traf3ip1-201ENSMUST00000047242 CftrP26361 1476 aa23.57■■□□□ 1.36
Traf3ip1-201ENSMUST00000047242 Golga3P55937 1487 aa23.51■■□□□ 1.35
Traf3ip1-201ENSMUST00000047242 Zeb1Q64318 1117 aa23.38■■□□□ 1.33
Traf3ip1-201ENSMUST00000047242 Smarca4Q3TKT4 1613 aaKnown RBP23.38■■□□□ 1.33
Traf3ip1-201ENSMUST00000047242 Supt5hO55201 1082 aaKnown RBP23.33■■□□□ 1.33
Traf3ip1-201ENSMUST00000047242 Cttnbp2B9EJA2 1648 aa23.3■■□□□ 1.32
Traf3ip1-201ENSMUST00000047242 Cc2d2aQ8CFW7 1633 aa23.17■■□□□ 1.3
Traf3ip1-201ENSMUST00000047242 Iqgap2Q3UQ44 1575 aa23.16■■□□□ 1.3
Traf3ip1-201ENSMUST00000047242 Top2bQ64511 1612 aa23.15■■□□□ 1.3
Traf3ip1-201ENSMUST00000047242 Atad2bE9Q166 1460 aaKnown RBP23.04■■□□□ 1.28
Traf3ip1-201ENSMUST00000047242 Myt1lP97500 1187 aa22.98■■□□□ 1.27
Traf3ip1-201ENSMUST00000047242 Mier1Q5UAK0 511 aa22.96■■□□□ 1.27
Traf3ip1-201ENSMUST00000047242 Pds5bQ4VA53 1446 aaKnown RBP22.96■■□□□ 1.27
Traf3ip1-201ENSMUST00000047242 UbtfP25976 765 aaKnown RBP22.93■■□□□ 1.26
Traf3ip1-201ENSMUST00000047242 Il27Q8K3I6 234 aa22.92■■□□□ 1.26
Traf3ip1-201ENSMUST00000047242 Fmn1Q05860 1466 aa22.86■■□□□ 1.25
Traf3ip1-201ENSMUST00000047242 Npm2Q80W85 207 aa22.85■■□□□ 1.25
Traf3ip1-201ENSMUST00000047242 Frmpd1A2AKB4 1549 aa22.8■■□□□ 1.24
Traf3ip1-201ENSMUST00000047242 Ppargc1bQ8VHJ7 1014 aa22.8■■□□□ 1.24
Traf3ip1-201ENSMUST00000047242 Wdr66E9Q743 1299 aa22.74■■□□□ 1.23
Traf3ip1-201ENSMUST00000047242 Top2aQ01320 1528 aaKnown RBP22.72■■□□□ 1.23
Traf3ip1-201ENSMUST00000047242 Rapgef2Q8CHG7 1496 aa22.7■■□□□ 1.22
Traf3ip1-201ENSMUST00000047242 Neurod1Q60867 357 aa22.7■■□□□ 1.22
Traf3ip1-201ENSMUST00000047242 Wdr62Q3U3T8 1523 aa22.68■■□□□ 1.22
Traf3ip1-201ENSMUST00000047242 NefmP08553 848 aa22.67■■□□□ 1.22
Traf3ip1-201ENSMUST00000047242 Kif15Q6P9L6 1387 aa22.64■■□□□ 1.22
Traf3ip1-201ENSMUST00000047242 Sall2Q9QX96 1004 aa22.64■■□□□ 1.21
Traf3ip1-201ENSMUST00000047242 Ercc6F8VPZ5 1481 aa22.61■■□□□ 1.21
Traf3ip1-201ENSMUST00000047242 Cep162Q6ZQ06 1403 aa22.6■■□□□ 1.21
Traf3ip1-201ENSMUST00000047242 PtprkP35822 1457 aa22.5■■□□□ 1.19
Traf3ip1-201ENSMUST00000047242 Unc13aQ4KUS2 1712 aa22.48■■□□□ 1.19
Traf3ip1-201ENSMUST00000047242 Plekhg3Q4VAC9 1341 aa22.48■■□□□ 1.19
Traf3ip1-201ENSMUST00000047242 Ap3b1Q9Z1T1 1105 aa22.47■■□□□ 1.19
Traf3ip1-201ENSMUST00000047242 Ubl4bQ9CQ84 188 aa22.46■■□□□ 1.19
Traf3ip1-201ENSMUST00000047242 TnnQ80Z71 1560 aa22.45■■□□□ 1.18
Traf3ip1-201ENSMUST00000047242 Las1lA2BE28 776 aaKnown RBP22.44■■□□□ 1.18
Traf3ip1-201ENSMUST00000047242 Lamc3Q9R0B6 1581 aa22.38■■□□□ 1.17
Traf3ip1-201ENSMUST00000047242 Aebp2Q9Z248 504 aaKnown RBP22.36■■□□□ 1.17
Traf3ip1-201ENSMUST00000047242 Clip1Q922J3 1391 aa22.35■■□□□ 1.17
Traf3ip1-201ENSMUST00000047242 Phldb1Q6PDH0 1371 aaKnown RBP22.28■■□□□ 1.16
Traf3ip1-201ENSMUST00000047242 Arhgap35Q91YM2 1499 aa22.28■■□□□ 1.16
Traf3ip1-201ENSMUST00000047242 Npm1Q61937 292 aaKnown RBP22.27■■□□□ 1.16
Traf3ip1-201ENSMUST00000047242 Cux2P70298 1426 aa22.27■■□□□ 1.16
Traf3ip1-201ENSMUST00000047242 Camsap1A2AHC3 1581 aa22.26■■□□□ 1.15
Traf3ip1-201ENSMUST00000047242 Dnajc5bQ9CQ94 199 aa22.23■■□□□ 1.15
Traf3ip1-201ENSMUST00000047242 Thoc2B1AZI6 1594 aaKnown RBP22.22■■□□□ 1.15
Traf3ip1-201ENSMUST00000047242 Ccdc18Q640L5 1455 aa22.2■■□□□ 1.14
Traf3ip1-201ENSMUST00000047242 Eif4g1Q6NZJ6 1600 aaKnown RBP22.2■■□□□ 1.14
Traf3ip1-201ENSMUST00000047242 Shroom4Q1W617 1475 aa22.15■■□□□ 1.14
Traf3ip1-201ENSMUST00000047242 Grin2bQ01097 1482 aa22.13■■□□□ 1.13
Traf3ip1-201ENSMUST00000047242 NrkQ9R0G8 1455 aa22.13■■□□□ 1.13
Traf3ip1-201ENSMUST00000047242 Eid3Q3V124 375 aa22.09■■□□□ 1.13
Traf3ip1-201ENSMUST00000047242 Baz1bQ9Z277 1479 aa22.08■■□□□ 1.13
Traf3ip1-201ENSMUST00000047242 Setd5Q5XJV7 1441 aa22.08■■□□□ 1.12
Traf3ip1-201ENSMUST00000047242 Csrnp3P59055 597 aa22.07■■□□□ 1.12
Traf3ip1-201ENSMUST00000047242 Nop58Q6DFW4 536 aaKnown RBP22.04■■□□□ 1.12
Traf3ip1-201ENSMUST00000047242 Arap1Q4LDD4 1452 aa22.04■■□□□ 1.12
Traf3ip1-201ENSMUST00000047242 TonslQ6NZL6 1363 aa22.04■■□□□ 1.12
Traf3ip1-201ENSMUST00000047242 Eea1Q8BL66 1411 aa22.01■■□□□ 1.11
Traf3ip1-201ENSMUST00000047242 Cdk11bP24788 784 aaKnown RBP22.01■■□□□ 1.11
Traf3ip1-201ENSMUST00000047242 Lmod2Q3UHZ5 550 aa22.01■■□□□ 1.11
Traf3ip1-201ENSMUST00000047242 LrpprcQ6PB66 1392 aaKnown RBP21.99■■□□□ 1.11
Traf3ip1-201ENSMUST00000047242 Gm38655A0A286YDK6 273 aa21.99■■□□□ 1.11
Traf3ip1-201ENSMUST00000047242 Mroh2bQ7M6Y6 1581 aa21.95■■□□□ 1.1
Traf3ip1-201ENSMUST00000047242 Fam135aQ6NS59 1506 aa21.93■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms