RNA–Protein interactions for RNA: ENSMUST00000040924.7

Ss18-201, Transcript of Protein SSXT, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ss18, Length 3,090 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18-201ENSMUST00000040924 NischQ80TM9 1593 aa26.86■■□□□ 1.89
Ss18-201ENSMUST00000040924 Gm35339A0A140LHH9 1649 aa25.89■■□□□ 1.74
Ss18-201ENSMUST00000040924 Abcc9P70170 1546 aa25.86■■□□□ 1.73
Ss18-201ENSMUST00000040924 Rhox8Q6VSS7 320 aa25.59■■□□□ 1.69
Ss18-201ENSMUST00000040924 Abcc8B2RUS7 1588 aa25.45■■□□□ 1.66
Ss18-201ENSMUST00000040924 Rpgrip1Q9EPQ2 1331 aa24.51■■□□□ 1.51
Ss18-201ENSMUST00000040924 ScribQ80U72 1612 aa23.96■■□□□ 1.43
Ss18-201ENSMUST00000040924 Ccdc136Q3TVA9 1136 aa23.85■■□□□ 1.41
Ss18-201ENSMUST00000040924 Pcgf6Q99NA9 353 aa23.73■■□□□ 1.39
Ss18-201ENSMUST00000040924 Acin1Q9JIX8 1338 aaKnown RBP23.65■■□□□ 1.38
Ss18-201ENSMUST00000040924 Rb1cc1Q9ESK9 1588 aa23.54■■□□□ 1.36
Ss18-201ENSMUST00000040924 Rtl1Q7M732 1744 aa23.52■■□□□ 1.36
Ss18-201ENSMUST00000040924 Kdm5dQ62240 1548 aa23.49■■□□□ 1.35
Ss18-201ENSMUST00000040924 Ccdc180J3QNE4 1664 aa23.35■■□□□ 1.33
Ss18-201ENSMUST00000040924 Zcchc6Q5BLK4 1491 aaKnown RBP23.3■■□□□ 1.32
Ss18-201ENSMUST00000040924 Ehmt2Q9Z148 1263 aaKnown RBP23.28■■□□□ 1.32
Ss18-201ENSMUST00000040924 Dcaf1Q80TR8 1506 aa23.16■■□□□ 1.3
Ss18-201ENSMUST00000040924 NacadQ5SWP3 1504 aa23.11■■□□□ 1.29
Ss18-201ENSMUST00000040924 Baz1aO88379 1555 aa23.08■■□□□ 1.28
Ss18-201ENSMUST00000040924 Neurod1Q60867 357 aa23.03■■□□□ 1.28
Ss18-201ENSMUST00000040924 Supt5hO55201 1082 aaKnown RBP22.93■■□□□ 1.26
Ss18-201ENSMUST00000040924 Trim41Q5NCC3 630 aa22.82■■□□□ 1.24
Ss18-201ENSMUST00000040924 Las1lA2BE28 776 aaKnown RBP22.81■■□□□ 1.24
Ss18-201ENSMUST00000040924 Cngb1E1AZ71 1325 aa22.73■■□□□ 1.23
Ss18-201ENSMUST00000040924 Sycp2Q9CUU3 1500 aa22.66■■□□□ 1.22
Ss18-201ENSMUST00000040924 1700123L14RikQ3V2K7 440 aa22.63■■□□□ 1.21
Ss18-201ENSMUST00000040924 Gab3Q8BSM5 595 aa22.58■■□□□ 1.2
Ss18-201ENSMUST00000040924 CenpbP27790 599 aa22.57■■□□□ 1.2
Ss18-201ENSMUST00000040924 Cecr2E9Q2Z1 1453 aa22.53■■□□□ 1.2
Ss18-201ENSMUST00000040924 Smarca2Q6DIC0 1577 aa22.52■■□□□ 1.2
Ss18-201ENSMUST00000040924 DiexfQ8BTT6 772 aaKnown RBP22.49■■□□□ 1.19
Ss18-201ENSMUST00000040924 HrcG5E8J6 738 aa22.49■■□□□ 1.19
Ss18-201ENSMUST00000040924 Chic1Q8CBW7 227 aa22.44■■□□□ 1.18
Ss18-201ENSMUST00000040924 Myt1Q8CFC2 1127 aa22.43■■□□□ 1.18
Ss18-201ENSMUST00000040924 Esf1Q3V1V3 845 aaKnown RBP22.39■■□□□ 1.18
Ss18-201ENSMUST00000040924 Csrnp3P59055 597 aa22.34■■□□□ 1.17
Ss18-201ENSMUST00000040924 BicraF8VPZ9 1578 aa22.33■■□□□ 1.17
Ss18-201ENSMUST00000040924 Crybg2B7ZCC2 1516 aa22.24■■□□□ 1.15
Ss18-201ENSMUST00000040924 Rsf1E9PWW9 1441 aaKnown RBP22.15■■□□□ 1.14
Ss18-201ENSMUST00000040924 Synj1Q8CHC4 1574 aa22.11■■□□□ 1.13
Ss18-201ENSMUST00000040924 Bcl11aQ9QYE3 773 aa22.1■■□□□ 1.13
Ss18-201ENSMUST00000040924 Ccdc88bQ4QRL3 1481 aa22.09■■□□□ 1.13
Ss18-201ENSMUST00000040924 Anks4bQ8K3X6 423 aa22.08■■□□□ 1.13
Ss18-201ENSMUST00000040924 Zeb1Q64318 1117 aa22.08■■□□□ 1.12
Ss18-201ENSMUST00000040924 Brd4Q9ESU6 1400 aaKnown RBP22.06■■□□□ 1.12
Ss18-201ENSMUST00000040924 Cep164Q5DU05 1446 aa21.97■■□□□ 1.11
Ss18-201ENSMUST00000040924 CftrP26361 1476 aa21.9■■□□□ 1.1
Ss18-201ENSMUST00000040924 Aplp2Q06335 707 aa21.88■■□□□ 1.09
Ss18-201ENSMUST00000040924 Golga3P55937 1487 aa21.87■■□□□ 1.09
Ss18-201ENSMUST00000040924 Sall2Q9QX96 1004 aa21.86■■□□□ 1.09
Ss18-201ENSMUST00000040924 Gm38655A0A286YDK6 273 aa21.83■■□□□ 1.09
Ss18-201ENSMUST00000040924 Myt1lP97500 1187 aa21.75■■□□□ 1.07
Ss18-201ENSMUST00000040924 PrkcshO08795 521 aa21.69■■□□□ 1.06
Ss18-201ENSMUST00000040924 Il27Q8K3I6 234 aa21.66■■□□□ 1.06
Ss18-201ENSMUST00000040924 Smarca4Q3TKT4 1613 aaKnown RBP21.65■■□□□ 1.06
Ss18-201ENSMUST00000040924 Cc2d2aQ8CFW7 1633 aa21.62■■□□□ 1.05
Ss18-201ENSMUST00000040924 Cttnbp2B9EJA2 1648 aa21.57■■□□□ 1.04
Ss18-201ENSMUST00000040924 Npm2Q80W85 207 aa21.52■■□□□ 1.03
Ss18-201ENSMUST00000040924 Iqgap2Q3UQ44 1575 aa21.49■■□□□ 1.03
Ss18-201ENSMUST00000040924 UbtfP25976 765 aaKnown RBP21.45■■□□□ 1.02
Ss18-201ENSMUST00000040924 Cdk11bP24788 784 aaKnown RBP21.45■■□□□ 1.02
Ss18-201ENSMUST00000040924 Top2bQ64511 1612 aa21.44■■□□□ 1.02
Ss18-201ENSMUST00000040924 Ifnlr1Q8CGK5 535 aa21.42■■□□□ 1.02
Ss18-201ENSMUST00000040924 NefmP08553 848 aa21.39■■□□□ 1.01
Ss18-201ENSMUST00000040924 Fam71e1A1L3C1 212 aa21.37■■□□□ 1.01
Ss18-201ENSMUST00000040924 Nop58Q6DFW4 536 aaKnown RBP21.35■■□□□ 1.01
Ss18-201ENSMUST00000040924 Mier1Q5UAK0 511 aa21.34■■□□□ 1.01
Ss18-201ENSMUST00000040924 Atad2bE9Q166 1460 aaKnown RBP21.3■■□□□ 1
Ss18-201ENSMUST00000040924 Wdr66E9Q743 1299 aa21.29■■□□□ 1
Ss18-201ENSMUST00000040924 Ap3b1Q9Z1T1 1105 aa21.29■■□□□ 1
Ss18-201ENSMUST00000040924 Amer1Q7TS75 1132 aa21.28■■□□□ 1
Ss18-201ENSMUST00000040924 Plekhg3Q4VAC9 1341 aa21.24■□□□□ 0.99
Ss18-201ENSMUST00000040924 Rapgef2Q8CHG7 1496 aa21.23■□□□□ 0.99
Ss18-201ENSMUST00000040924 Pds5bQ4VA53 1446 aaKnown RBP21.21■□□□□ 0.99
Ss18-201ENSMUST00000040924 Fmn1Q05860 1466 aa21.2■□□□□ 0.98
Ss18-201ENSMUST00000040924 Ppargc1bQ8VHJ7 1014 aa21.2■□□□□ 0.98
Ss18-201ENSMUST00000040924 Frmpd1A2AKB4 1549 aa21.16■□□□□ 0.98
Ss18-201ENSMUST00000040924 Mapk8ip2Q9ERE9 830 aa21.16■□□□□ 0.98
Ss18-201ENSMUST00000040924 Aebp2Q9Z248 504 aaKnown RBP21.15■□□□□ 0.98
Ss18-201ENSMUST00000040924 Kif15Q6P9L6 1387 aa21.14■□□□□ 0.97
Ss18-201ENSMUST00000040924 Top2aQ01320 1528 aaKnown RBP21.09■□□□□ 0.97
Ss18-201ENSMUST00000040924 Cep162Q6ZQ06 1403 aa21.08■□□□□ 0.97
Ss18-201ENSMUST00000040924 PtprkP35822 1457 aa21.04■□□□□ 0.96
Ss18-201ENSMUST00000040924 SafbD3YXK2 937 aaKnown RBP21.03■□□□□ 0.96
Ss18-201ENSMUST00000040924 Wdr62Q3U3T8 1523 aa20.99■□□□□ 0.95
Ss18-201ENSMUST00000040924 Ubl4bQ9CQ84 188 aa20.98■□□□□ 0.95
Ss18-201ENSMUST00000040924 Ercc6F8VPZ5 1481 aa20.97■□□□□ 0.95
Ss18-201ENSMUST00000040924 Clip1Q922J3 1391 aa20.93■□□□□ 0.94
Ss18-201ENSMUST00000040924 ClspnQ80YR7 1315 aa20.91■□□□□ 0.94
Ss18-201ENSMUST00000040924 Dnajc5bQ9CQ94 199 aa20.89■□□□□ 0.93
Ss18-201ENSMUST00000040924 Hnrnpul2Q00PI9 745 aaKnown RBP20.84■□□□□ 0.93
Ss18-201ENSMUST00000040924 Unc13aQ4KUS2 1712 aa20.84■□□□□ 0.93
Ss18-201ENSMUST00000040924 Lmod2Q3UHZ5 550 aa20.82■□□□□ 0.92
Ss18-201ENSMUST00000040924 Npm1Q61937 292 aaKnown RBP20.81■□□□□ 0.92
Ss18-201ENSMUST00000040924 Cux2P70298 1426 aa20.75■□□□□ 0.91
Ss18-201ENSMUST00000040924 Arhgap35Q91YM2 1499 aa20.75■□□□□ 0.91
Ss18-201ENSMUST00000040924 Eid3Q3V124 375 aa20.74■□□□□ 0.91
Ss18-201ENSMUST00000040924 TnnQ80Z71 1560 aa20.73■□□□□ 0.91
Ss18-201ENSMUST00000040924 Lamc3Q9R0B6 1581 aa20.69■□□□□ 0.9
Ss18-201ENSMUST00000040924 Hdac5Q9Z2V6 1113 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms