RNA–Protein interactions for RNA: ENSMUST00000039267.9

Chd7-201, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd7, Length 9,444 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-201ENSMUST00000039267 Rpgrip1Q9EPQ2 1331 aa20.67■□□□□ 0.9
Chd7-201ENSMUST00000039267 Rhox8Q6VSS7 320 aa20.64■□□□□ 0.89
Chd7-201ENSMUST00000039267 Cngb1E1AZ71 1325 aa20.27■□□□□ 0.84
Chd7-201ENSMUST00000039267 Las1lA2BE28 776 aaKnown RBP20.2■□□□□ 0.82
Chd7-201ENSMUST00000039267 Pelp1Q9DBD5 1123 aaKnown RBP19.91■□□□□ 0.78
Chd7-201ENSMUST00000039267 Rtl1Q7M732 1744 aa18.98■□□□□ 0.63
Chd7-201ENSMUST00000039267 Wdr66E9Q743 1299 aa18.98■□□□□ 0.63
Chd7-201ENSMUST00000039267 CenpbP27790 599 aa18.95■□□□□ 0.62
Chd7-201ENSMUST00000039267 Amer1Q7TS75 1132 aa18.94■□□□□ 0.62
Chd7-201ENSMUST00000039267 Ehmt2Q9Z148 1263 aaKnown RBP18.85■□□□□ 0.61
Chd7-201ENSMUST00000039267 Myt1Q8CFC2 1127 aa18.82■□□□□ 0.6
Chd7-201ENSMUST00000039267 Zeb1Q64318 1117 aa18.69■□□□□ 0.58
Chd7-201ENSMUST00000039267 Stra8P70278 393 aa18.65■□□□□ 0.58
Chd7-201ENSMUST00000039267 4930567H17RikQ3V0K5 233 aa18.63■□□□□ 0.57
Chd7-201ENSMUST00000039267 Ccdc180J3QNE4 1664 aa18.57■□□□□ 0.56
Chd7-201ENSMUST00000039267 Ube2uB1AUC4 352 aa18.45■□□□□ 0.54
Chd7-201ENSMUST00000039267 Acin1Q9JIX8 1338 aaKnown RBP18.39■□□□□ 0.53
Chd7-201ENSMUST00000039267 NefmP08553 848 aa18.33■□□□□ 0.52
Chd7-201ENSMUST00000039267 Esf1Q3V1V3 845 aaKnown RBP18.14■□□□□ 0.49
Chd7-201ENSMUST00000039267 Ttbk1Q6PCN3 1308 aa18.07■□□□□ 0.48
Chd7-201ENSMUST00000039267 Tnnt3Q9QZ47 272 aa18.07■□□□□ 0.48
Chd7-201ENSMUST00000039267 Trim41Q5NCC3 630 aa18.05■□□□□ 0.48
Chd7-201ENSMUST00000039267 Ccdc136Q3TVA9 1136 aa18.04■□□□□ 0.48
Chd7-201ENSMUST00000039267 Rtl5Q5DTT4 599 aa18.04■□□□□ 0.48
Chd7-201ENSMUST00000039267 4933416C03RikQ3V063 378 aa18.03■□□□□ 0.48
Chd7-201ENSMUST00000039267 Npm2Q80W85 207 aa17.99■□□□□ 0.47
Chd7-201ENSMUST00000039267 Cdk11bP24788 784 aaKnown RBP17.95■□□□□ 0.46
Chd7-201ENSMUST00000039267 Gab3Q8BSM5 595 aa17.88■□□□□ 0.45
Chd7-201ENSMUST00000039267 NeflP08551 543 aa17.86■□□□□ 0.45
Chd7-201ENSMUST00000039267 Slc24a1Q91WD8 1130 aa17.77■□□□□ 0.43
Chd7-201ENSMUST00000039267 Myt1lP97500 1187 aa17.74■□□□□ 0.43
Chd7-201ENSMUST00000039267 NischQ80TM9 1593 aa17.73■□□□□ 0.43
Chd7-201ENSMUST00000039267 Anp32bQ9EST5 272 aaKnown RBP17.71■□□□□ 0.43
Chd7-201ENSMUST00000039267 DiexfQ8BTT6 772 aaKnown RBP17.7■□□□□ 0.42
Chd7-201ENSMUST00000039267 Pcgf6Q99NA9 353 aa17.69■□□□□ 0.42
Chd7-201ENSMUST00000039267 NrdcQ8BHG1 1161 aa17.67■□□□□ 0.42
Chd7-201ENSMUST00000039267 HrcG5E8J6 738 aa17.61■□□□□ 0.41
Chd7-201ENSMUST00000039267 Nop58Q6DFW4 536 aaKnown RBP17.61■□□□□ 0.41
Chd7-201ENSMUST00000039267 UbtfP25976 765 aaKnown RBP17.61■□□□□ 0.41
Chd7-201ENSMUST00000039267 NclP09405 707 aaKnown RBP17.33■□□□□ 0.37
Chd7-201ENSMUST00000039267 Anp32aO35381 247 aa17.32■□□□□ 0.36
Chd7-201ENSMUST00000039267 Eif5bQ05D44 1216 aaKnown RBP17.29■□□□□ 0.36
Chd7-201ENSMUST00000039267 Ythdc1E9Q5K9 736 aaKnown RBP17.24■□□□□ 0.35
Chd7-201ENSMUST00000039267 TonslQ6NZL6 1363 aa17.22■□□□□ 0.35
Chd7-201ENSMUST00000039267 DaxxO35613 739 aa17.2■□□□□ 0.34
Chd7-201ENSMUST00000039267 Neurod1Q60867 357 aa17.2■□□□□ 0.34
Chd7-201ENSMUST00000039267 Supt5hO55201 1082 aaKnown RBP17.15■□□□□ 0.34
Chd7-201ENSMUST00000039267 Ccdc9Q8VC31 543 aaKnown RBP17.08■□□□□ 0.33
Chd7-201ENSMUST00000039267 ClspnQ80YR7 1315 aa17.07■□□□□ 0.32
Chd7-201ENSMUST00000039267 Fam50aQ9WV03 339 aaKnown RBP17.05■□□□□ 0.32
Chd7-201ENSMUST00000039267 Os9Q8K2C7 672 aa16.97■□□□□ 0.31
Chd7-201ENSMUST00000039267 CatipB9EKE5 520 aa16.92■□□□□ 0.3
Chd7-201ENSMUST00000039267 Aplp2Q06335 707 aa16.88■□□□□ 0.29
Chd7-201ENSMUST00000039267 Anks4bQ8K3X6 423 aa16.82■□□□□ 0.28
Chd7-201ENSMUST00000039267 Upf2A2AT37 1269 aaKnown RBP16.8■□□□□ 0.28
Chd7-201ENSMUST00000039267 Mier1Q5UAK0 511 aa16.74■□□□□ 0.27
Chd7-201ENSMUST00000039267 Hsp90aa1P07901 733 aaKnown RBP16.7■□□□□ 0.26
Chd7-201ENSMUST00000039267 Ppargc1bQ8VHJ7 1014 aa16.7■□□□□ 0.26
Chd7-201ENSMUST00000039267 Ap3b1Q9Z1T1 1105 aa16.64■□□□□ 0.25
Chd7-201ENSMUST00000039267 Nlrp6Q91WS2 869 aa16.62■□□□□ 0.25
Chd7-201ENSMUST00000039267 Hdac5Q9Z2V6 1113 aa16.62■□□□□ 0.25
Chd7-201ENSMUST00000039267 Dcaf1Q80TR8 1506 aa16.62■□□□□ 0.25
Chd7-201ENSMUST00000039267 Zcchc6Q5BLK4 1491 aaKnown RBP16.62■□□□□ 0.25
Chd7-201ENSMUST00000039267 Csrnp3P59055 597 aa16.62■□□□□ 0.25
Chd7-201ENSMUST00000039267 Il27Q8K3I6 234 aa16.6■□□□□ 0.25
Chd7-201ENSMUST00000039267 Trim44Q9QXA7 346 aa16.56■□□□□ 0.24
Chd7-201ENSMUST00000039267 Calr4Q3TQS0 420 aa16.56■□□□□ 0.24
Chd7-201ENSMUST00000039267 Lmod3E9QA62 571 aa16.5■□□□□ 0.23
Chd7-201ENSMUST00000039267 Wdr43Q6ZQL4 677 aaKnown RBP16.48■□□□□ 0.23
Chd7-201ENSMUST00000039267 Ppp4r2Q0VGB7 417 aa16.46■□□□□ 0.23
Chd7-201ENSMUST00000039267 ArxO35085 564 aa16.45■□□□□ 0.22
Chd7-201ENSMUST00000039267 DekQ7TNV0 380 aaKnown RBP16.43■□□□□ 0.22
Chd7-201ENSMUST00000039267 Polr3glQ8R0C0 218 aa16.41■□□□□ 0.22
Chd7-201ENSMUST00000039267 Adam1bQ8R534 806 aa16.41■□□□□ 0.22
Chd7-201ENSMUST00000039267 Ccdc27Q3V036 639 aa16.36■□□□□ 0.21
Chd7-201ENSMUST00000039267 Ccer2J3QPU5 274 aa16.36■□□□□ 0.21
Chd7-201ENSMUST00000039267 Htatsf1Q8BGC0 757 aa16.35■□□□□ 0.21
Chd7-201ENSMUST00000039267 Gm38655A0A286YDK6 273 aa16.33■□□□□ 0.2
Chd7-201ENSMUST00000039267 Abcc9P70170 1546 aa16.3■□□□□ 0.2
Chd7-201ENSMUST00000039267 Tnnt2P50752 301 aa16.26■□□□□ 0.19
Chd7-201ENSMUST00000039267 Cep164Q5DU05 1446 aa16.25■□□□□ 0.19
Chd7-201ENSMUST00000039267 Sall2Q9QX96 1004 aa16.24■□□□□ 0.19
Chd7-201ENSMUST00000039267 CanxP35564 591 aaKnown RBP16.23■□□□□ 0.19
Chd7-201ENSMUST00000039267 Hsp90ab1P11499 724 aaKnown RBP16.23■□□□□ 0.19
Chd7-201ENSMUST00000039267 PtmaP26350 111 aa16.23■□□□□ 0.19
Chd7-201ENSMUST00000039267 Plekhg3Q4VAC9 1341 aa16.23■□□□□ 0.19
Chd7-201ENSMUST00000039267 Hnrnpul2Q00PI9 745 aaKnown RBP16.23■□□□□ 0.19
Chd7-201ENSMUST00000039267 Bcl11aQ9QYE3 773 aa16.19■□□□□ 0.18
Chd7-201ENSMUST00000039267 Irx3P81067 507 aa16.19■□□□□ 0.18
Chd7-201ENSMUST00000039267 Gm13697A2AK42 830 aa16.18■□□□□ 0.18
Chd7-201ENSMUST00000039267 Fam71e1A1L3C1 212 aa16.12■□□□□ 0.17
Chd7-201ENSMUST00000039267 Trim30dE9PWL0 497 aa16.11■□□□□ 0.17
Chd7-201ENSMUST00000039267 Ppm1gQ61074 542 aa16.11■□□□□ 0.17
Chd7-201ENSMUST00000039267 Erich6D3Z6S9 713 aa16.11■□□□□ 0.17
Chd7-201ENSMUST00000039267 Chic1Q8CBW7 227 aa16.11■□□□□ 0.17
Chd7-201ENSMUST00000039267 Clip1Q922J3 1391 aa16.1■□□□□ 0.17
Chd7-201ENSMUST00000039267 Zbtb7cQ8VCZ7 619 aa16.09■□□□□ 0.17
Chd7-201ENSMUST00000039267 Mapk8ip2Q9ERE9 830 aa16.09■□□□□ 0.17
Chd7-201ENSMUST00000039267 Vsig10D3YX43 558 aa16.08■□□□□ 0.17
Chd7-201ENSMUST00000039267 Brd4Q9ESU6 1400 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 115.8 ms