RNA–Protein interactions for RNA: ENSMUST00000038739.4

Rfwd3-201, Transcript of E3 ubiquitin-protein ligase RFWD3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rfwd3, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3-201ENSMUST00000038739 Gm35339A0A140LHH9 1649 aa17.91■□□□□ 0.46
Rfwd3-201ENSMUST00000038739 NischQ80TM9 1593 aa17.34■□□□□ 0.37
Rfwd3-201ENSMUST00000038739 Abcc9P70170 1546 aa16.94■□□□□ 0.3
Rfwd3-201ENSMUST00000038739 Abcc8B2RUS7 1588 aa16.85■□□□□ 0.29
Rfwd3-201ENSMUST00000038739 ScribQ80U72 1612 aa16.34■□□□□ 0.21
Rfwd3-201ENSMUST00000038739 Kdm5dQ62240 1548 aa15.62■□□□□ 0.09
Rfwd3-201ENSMUST00000038739 Dcaf1Q80TR8 1506 aa15.59■□□□□ 0.09
Rfwd3-201ENSMUST00000038739 NacadQ5SWP3 1504 aa15.46■□□□□ 0.07
Rfwd3-201ENSMUST00000038739 Sycp2Q9CUU3 1500 aa15.26■□□□□ 0.03
Rfwd3-201ENSMUST00000038739 BicraF8VPZ9 1578 aa15.24■□□□□ 0.03
Rfwd3-201ENSMUST00000038739 Ccdc180J3QNE4 1664 aa15.2■□□□□ 0.02
Rfwd3-201ENSMUST00000038739 Rb1cc1Q9ESK9 1588 aa15.13■□□□□ 0.01
Rfwd3-201ENSMUST00000038739 Baz1aO88379 1555 aa14.94□□□□□ -0.02
Rfwd3-201ENSMUST00000038739 Crybg2B7ZCC2 1516 aa14.87□□□□□ -0.03
Rfwd3-201ENSMUST00000038739 Smarca2Q6DIC0 1577 aa14.64□□□□□ -0.07
Rfwd3-201ENSMUST00000038739 Rtl1Q7M732 1744 aa14.53□□□□□ -0.08
Rfwd3-201ENSMUST00000038739 Thoc2B1AZI6 1594 aaKnown RBP14.5□□□□□ -0.09
Rfwd3-201ENSMUST00000038739 Cecr2E9Q2Z1 1453 aa14.47□□□□□ -0.09
Rfwd3-201ENSMUST00000038739 Rhox8Q6VSS7 320 aa14.41□□□□□ -0.1
Rfwd3-201ENSMUST00000038739 Zcchc6Q5BLK4 1491 aaKnown RBP14.37□□□□□ -0.11
Rfwd3-201ENSMUST00000038739 Smarca4Q3TKT4 1613 aaKnown RBP14.36□□□□□ -0.11
Rfwd3-201ENSMUST00000038739 Unc13aQ4KUS2 1712 aa14.32□□□□□ -0.12
Rfwd3-201ENSMUST00000038739 Dnajc5bQ9CQ94 199 aa14.29□□□□□ -0.12
Rfwd3-201ENSMUST00000038739 Atad2bE9Q166 1460 aaKnown RBP14.29□□□□□ -0.12
Rfwd3-201ENSMUST00000038739 Pds5bQ4VA53 1446 aaKnown RBP14.27□□□□□ -0.12
Rfwd3-201ENSMUST00000038739 Iqgap2Q3UQ44 1575 aa14.27□□□□□ -0.13
Rfwd3-201ENSMUST00000038739 Wdr62Q3U3T8 1523 aa14.17□□□□□ -0.14
Rfwd3-201ENSMUST00000038739 Synj1Q8CHC4 1574 aa14.16□□□□□ -0.14
Rfwd3-201ENSMUST00000038739 Frmpd1A2AKB4 1549 aa14.12□□□□□ -0.15
Rfwd3-201ENSMUST00000038739 Cc2d2aQ8CFW7 1633 aa14.12□□□□□ -0.15
Rfwd3-201ENSMUST00000038739 Fam135aQ6NS59 1506 aa14.1□□□□□ -0.15
Rfwd3-201ENSMUST00000038739 Cttnbp2B9EJA2 1648 aa14.1□□□□□ -0.15
Rfwd3-201ENSMUST00000038739 CftrP26361 1476 aa14.06□□□□□ -0.16
Rfwd3-201ENSMUST00000038739 Ercc6F8VPZ5 1481 aa13.89□□□□□ -0.19
Rfwd3-201ENSMUST00000038739 Top2bQ64511 1612 aa13.84□□□□□ -0.19
Rfwd3-201ENSMUST00000038739 Brd4Q9ESU6 1400 aaKnown RBP13.82□□□□□ -0.2
Rfwd3-201ENSMUST00000038739 TnnQ80Z71 1560 aa13.75□□□□□ -0.21
Rfwd3-201ENSMUST00000038739 Baz1bQ9Z277 1479 aa13.73□□□□□ -0.21
Rfwd3-201ENSMUST00000038739 Phldb1Q6PDH0 1371 aaKnown RBP13.73□□□□□ -0.21
Rfwd3-201ENSMUST00000038739 Lamc3Q9R0B6 1581 aa13.7□□□□□ -0.22
Rfwd3-201ENSMUST00000038739 Ccdc136Q3TVA9 1136 aa13.65□□□□□ -0.22
Rfwd3-201ENSMUST00000038739 Kif21aQ9QXL2 1672 aa13.55□□□□□ -0.24
Rfwd3-201ENSMUST00000038739 Mrc2Q64449 1479 aa13.54□□□□□ -0.24
Rfwd3-201ENSMUST00000038739 Golga3P55937 1487 aa13.52□□□□□ -0.24
Rfwd3-201ENSMUST00000038739 Lrriq1Q0P5X1 1673 aa13.48□□□□□ -0.25
Rfwd3-201ENSMUST00000038739 Camsap1A2AHC3 1581 aa13.44□□□□□ -0.26
Rfwd3-201ENSMUST00000038739 Setd1bQ8CFT2 1985 aa13.41□□□□□ -0.26
Rfwd3-201ENSMUST00000038739 Rsf1E9PWW9 1441 aaKnown RBP13.4□□□□□ -0.27
Rfwd3-201ENSMUST00000038739 Ubl4bQ9CQ84 188 aa13.37□□□□□ -0.27
Rfwd3-201ENSMUST00000038739 Cux2P70298 1426 aa13.37□□□□□ -0.27
Rfwd3-201ENSMUST00000038739 Trim41Q5NCC3 630 aa13.36□□□□□ -0.27
Rfwd3-201ENSMUST00000038739 Ccdc88bQ4QRL3 1481 aa13.35□□□□□ -0.27
Rfwd3-201ENSMUST00000038739 Fmn1Q05860 1466 aa13.34□□□□□ -0.27
Rfwd3-201ENSMUST00000038739 Kif15Q6P9L6 1387 aa13.33□□□□□ -0.28
Rfwd3-201ENSMUST00000038739 Top2aQ01320 1528 aaKnown RBP13.31□□□□□ -0.28
Rfwd3-201ENSMUST00000038739 Eif4g3Q80XI3 1579 aaKnown RBP13.25□□□□□ -0.29
Rfwd3-201ENSMUST00000038739 Gpatch8A2A6A1 1505 aa13.24□□□□□ -0.29
Rfwd3-201ENSMUST00000038739 Urb2E9Q7L1 1524 aaKnown RBP13.23□□□□□ -0.29
Rfwd3-201ENSMUST00000038739 Grin2bQ01097 1482 aa13.2□□□□□ -0.3
Rfwd3-201ENSMUST00000038739 Samd9lQ69Z37 1561 aa13.2□□□□□ -0.3
Rfwd3-201ENSMUST00000038739 Crocc2F6XLV1 1638 aa13.2□□□□□ -0.3
Rfwd3-201ENSMUST00000038739 Eif4g1Q6NZJ6 1600 aaKnown RBP13.17□□□□□ -0.3
Rfwd3-201ENSMUST00000038739 PogzQ8BZH4 1409 aaKnown RBP13.16□□□□□ -0.3
Rfwd3-201ENSMUST00000038739 Esf1Q3V1V3 845 aaKnown RBP13.14□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 PtprkP35822 1457 aa13.14□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 Plb1Q3TTY0 1478 aa13.13□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 Chic1Q8CBW7 227 aa13.11□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 LrpprcQ6PB66 1392 aaKnown RBP13.11□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 Dhx29Q6PGC1 1365 aaKnown RBP13.1□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 Duox2A2AQ99 1517 aa13.1□□□□□ -0.31
Rfwd3-201ENSMUST00000038739 Ccdc18Q640L5 1455 aa13.08□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 NrkQ9R0G8 1455 aa13.07□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 Cep164Q5DU05 1446 aa13.07□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 Disp1Q3TDN0 1521 aa13.06□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 Magi3Q9EQJ9 1476 aa13.05□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 Pbrm1Q8BSQ9 1634 aaKnown RBP13.04□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 Rusc2Q80U22 1514 aa13.03□□□□□ -0.32
Rfwd3-201ENSMUST00000038739 Shroom4Q1W617 1475 aa13.02□□□□□ -0.33
Rfwd3-201ENSMUST00000038739 Cngb1E1AZ71 1325 aa13.01□□□□□ -0.33
Rfwd3-201ENSMUST00000038739 Nup160Q9Z0W3 1402 aaKnown RBP12.99□□□□□ -0.33
Rfwd3-201ENSMUST00000038739 Efcab5A0JP43 1406 aa12.97□□□□□ -0.33
Rfwd3-201ENSMUST00000038739 Pla2r1Q62028 1487 aa12.95□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 Ift140E9PY46 1464 aa12.94□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 Zcchc11B2RX14 1644 aaKnown RBP12.93□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 SynmQ70IV5 1561 aa12.93□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 Abca16E9PWJ7 1678 aa12.92□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 Rapgef2Q8CHG7 1496 aa12.92□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 Rad54l2Q99NG0 1466 aa12.91□□□□□ -0.34
Rfwd3-201ENSMUST00000038739 Grin2aP35436 1464 aa12.89□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Abcc2Q8VI47 1543 aa12.89□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Npm1Q61937 292 aaKnown RBP12.89□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Mroh2bQ7M6Y6 1581 aa12.87□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Shroom2A2ALU4 1481 aa12.87□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Arhgap35Q91YM2 1499 aa12.87□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Adamts12Q811B3 1600 aa12.87□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 HrcG5E8J6 738 aa12.85□□□□□ -0.35
Rfwd3-201ENSMUST00000038739 Dnmt1P13864 1620 aaKnown RBP12.83□□□□□ -0.36
Rfwd3-201ENSMUST00000038739 BC005561E9Q5E2 1589 aa12.83□□□□□ -0.36
Rfwd3-201ENSMUST00000038739 WizO88286 1684 aaKnown RBP12.82□□□□□ -0.36
Rfwd3-201ENSMUST00000038739 Chd1P40201 1711 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 248 ms