RNA–Protein interactions for RNA: ENSMUST00000035033.6

Copb2-201, Transcript of Coatomer subunit beta', mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb2, Length 3,050 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2-201ENSMUST00000035033 NischQ80TM9 1593 aa26.44■■□□□ 1.82
Copb2-201ENSMUST00000035033 Gm35339A0A140LHH9 1649 aa26.19■■□□□ 1.78
Copb2-201ENSMUST00000035033 Abcc9P70170 1546 aa25.64■■□□□ 1.7
Copb2-201ENSMUST00000035033 Abcc8B2RUS7 1588 aa25.24■■□□□ 1.63
Copb2-201ENSMUST00000035033 Rhox8Q6VSS7 320 aa24.06■■□□□ 1.44
Copb2-201ENSMUST00000035033 ScribQ80U72 1612 aa23.76■■□□□ 1.39
Copb2-201ENSMUST00000035033 Dcaf1Q80TR8 1506 aa23.44■■□□□ 1.34
Copb2-201ENSMUST00000035033 Kdm5dQ62240 1548 aa23.24■■□□□ 1.31
Copb2-201ENSMUST00000035033 Rtl1Q7M732 1744 aa23.16■■□□□ 1.3
Copb2-201ENSMUST00000035033 Rb1cc1Q9ESK9 1588 aa23.13■■□□□ 1.29
Copb2-201ENSMUST00000035033 NacadQ5SWP3 1504 aa23.12■■□□□ 1.29
Copb2-201ENSMUST00000035033 Baz1aO88379 1555 aa22.84■■□□□ 1.25
Copb2-201ENSMUST00000035033 Ccdc180J3QNE4 1664 aa22.8■■□□□ 1.24
Copb2-201ENSMUST00000035033 Sycp2Q9CUU3 1500 aa22.63■■□□□ 1.21
Copb2-201ENSMUST00000035033 Zcchc6Q5BLK4 1491 aaKnown RBP22.53■■□□□ 1.2
Copb2-201ENSMUST00000035033 Crybg2B7ZCC2 1516 aa22.51■■□□□ 1.19
Copb2-201ENSMUST00000035033 Ccdc136Q3TVA9 1136 aa22.38■■□□□ 1.17
Copb2-201ENSMUST00000035033 Smarca2Q6DIC0 1577 aa22.28■■□□□ 1.16
Copb2-201ENSMUST00000035033 BicraF8VPZ9 1578 aa22.18■■□□□ 1.14
Copb2-201ENSMUST00000035033 Trim41Q5NCC3 630 aa21.93■■□□□ 1.1
Copb2-201ENSMUST00000035033 Cecr2E9Q2Z1 1453 aa21.9■■□□□ 1.1
Copb2-201ENSMUST00000035033 Brd4Q9ESU6 1400 aaKnown RBP21.75■■□□□ 1.07
Copb2-201ENSMUST00000035033 HrcG5E8J6 738 aa21.71■■□□□ 1.07
Copb2-201ENSMUST00000035033 Synj1Q8CHC4 1574 aa21.61■■□□□ 1.05
Copb2-201ENSMUST00000035033 Smarca4Q3TKT4 1613 aaKnown RBP21.55■■□□□ 1.04
Copb2-201ENSMUST00000035033 CftrP26361 1476 aa21.53■■□□□ 1.04
Copb2-201ENSMUST00000035033 Cngb1E1AZ71 1325 aa21.45■■□□□ 1.02
Copb2-201ENSMUST00000035033 Cttnbp2B9EJA2 1648 aa21.42■■□□□ 1.02
Copb2-201ENSMUST00000035033 Esf1Q3V1V3 845 aaKnown RBP21.38■■□□□ 1.01
Copb2-201ENSMUST00000035033 Golga3P55937 1487 aa21.36■■□□□ 1.01
Copb2-201ENSMUST00000035033 Atad2bE9Q166 1460 aaKnown RBP21.33■■□□□ 1
Copb2-201ENSMUST00000035033 Pds5bQ4VA53 1446 aaKnown RBP21.32■■□□□ 1
Copb2-201ENSMUST00000035033 Iqgap2Q3UQ44 1575 aa21.32■■□□□ 1
Copb2-201ENSMUST00000035033 Cep164Q5DU05 1446 aa21.24■□□□□ 0.99
Copb2-201ENSMUST00000035033 Rsf1E9PWW9 1441 aaKnown RBP21.19■□□□□ 0.98
Copb2-201ENSMUST00000035033 Chic1Q8CBW7 227 aa21.18■□□□□ 0.98
Copb2-201ENSMUST00000035033 Top2bQ64511 1612 aa21.15■□□□□ 0.98
Copb2-201ENSMUST00000035033 Ccdc88bQ4QRL3 1481 aa21.13■□□□□ 0.97
Copb2-201ENSMUST00000035033 Cc2d2aQ8CFW7 1633 aa20.97■□□□□ 0.95
Copb2-201ENSMUST00000035033 Frmpd1A2AKB4 1549 aa20.97■□□□□ 0.95
Copb2-201ENSMUST00000035033 Wdr62Q3U3T8 1523 aa20.96■□□□□ 0.95
Copb2-201ENSMUST00000035033 Ercc6F8VPZ5 1481 aa20.93■□□□□ 0.94
Copb2-201ENSMUST00000035033 Gab3Q8BSM5 595 aa20.93■□□□□ 0.94
Copb2-201ENSMUST00000035033 Fmn1Q05860 1466 aa20.88■□□□□ 0.93
Copb2-201ENSMUST00000035033 Ehmt2Q9Z148 1263 aaKnown RBP20.76■□□□□ 0.91
Copb2-201ENSMUST00000035033 Thoc2B1AZI6 1594 aaKnown RBP20.73■□□□□ 0.91
Copb2-201ENSMUST00000035033 Top2aQ01320 1528 aaKnown RBP20.7■□□□□ 0.9
Copb2-201ENSMUST00000035033 Unc13aQ4KUS2 1712 aa20.68■□□□□ 0.9
Copb2-201ENSMUST00000035033 TnnQ80Z71 1560 aa20.67■□□□□ 0.9
Copb2-201ENSMUST00000035033 Kif15Q6P9L6 1387 aa20.62■□□□□ 0.89
Copb2-201ENSMUST00000035033 Lamc3Q9R0B6 1581 aa20.62■□□□□ 0.89
Copb2-201ENSMUST00000035033 Phldb1Q6PDH0 1371 aaKnown RBP20.6■□□□□ 0.89
Copb2-201ENSMUST00000035033 Rapgef2Q8CHG7 1496 aa20.52■□□□□ 0.88
Copb2-201ENSMUST00000035033 Ubl4bQ9CQ84 188 aa20.49■□□□□ 0.87
Copb2-201ENSMUST00000035033 Il27Q8K3I6 234 aa20.48■□□□□ 0.87
Copb2-201ENSMUST00000035033 Fam135aQ6NS59 1506 aa20.46■□□□□ 0.87
Copb2-201ENSMUST00000035033 Npm2Q80W85 207 aa20.41■□□□□ 0.86
Copb2-201ENSMUST00000035033 Camsap1A2AHC3 1581 aa20.39■□□□□ 0.86
Copb2-201ENSMUST00000035033 Acin1Q9JIX8 1338 aaKnown RBP20.38■□□□□ 0.85
Copb2-201ENSMUST00000035033 Cep162Q6ZQ06 1403 aa20.37■□□□□ 0.85
Copb2-201ENSMUST00000035033 Ccdc18Q640L5 1455 aa20.36■□□□□ 0.85
Copb2-201ENSMUST00000035033 Cux2P70298 1426 aa20.36■□□□□ 0.85
Copb2-201ENSMUST00000035033 Rpgrip1Q9EPQ2 1331 aa20.34■□□□□ 0.85
Copb2-201ENSMUST00000035033 Myt1lP97500 1187 aa20.31■□□□□ 0.84
Copb2-201ENSMUST00000035033 PtprkP35822 1457 aa20.29■□□□□ 0.84
Copb2-201ENSMUST00000035033 Dnajc5bQ9CQ94 199 aa20.28■□□□□ 0.84
Copb2-201ENSMUST00000035033 Npm1Q61937 292 aaKnown RBP20.27■□□□□ 0.84
Copb2-201ENSMUST00000035033 Grin2bQ01097 1482 aa20.24■□□□□ 0.83
Copb2-201ENSMUST00000035033 NrkQ9R0G8 1455 aa20.23■□□□□ 0.83
Copb2-201ENSMUST00000035033 Eif4g1Q6NZJ6 1600 aaKnown RBP20.22■□□□□ 0.83
Copb2-201ENSMUST00000035033 Shroom4Q1W617 1475 aa20.21■□□□□ 0.83
Copb2-201ENSMUST00000035033 Arhgap35Q91YM2 1499 aa20.16■□□□□ 0.82
Copb2-201ENSMUST00000035033 LrpprcQ6PB66 1392 aaKnown RBP20.12■□□□□ 0.81
Copb2-201ENSMUST00000035033 Baz1bQ9Z277 1479 aa20.08■□□□□ 0.81
Copb2-201ENSMUST00000035033 Zeb1Q64318 1117 aa20.08■□□□□ 0.8
Copb2-201ENSMUST00000035033 PogzQ8BZH4 1409 aaKnown RBP20.06■□□□□ 0.8
Copb2-201ENSMUST00000035033 Mrc2Q64449 1479 aa20.05■□□□□ 0.8
Copb2-201ENSMUST00000035033 Efcab5A0JP43 1406 aa20.03■□□□□ 0.8
Copb2-201ENSMUST00000035033 Duox2A2AQ99 1517 aa20.02■□□□□ 0.8
Copb2-201ENSMUST00000035033 Map3k1P53349 1493 aa20.01■□□□□ 0.79
Copb2-201ENSMUST00000035033 Clip1Q922J3 1391 aa20■□□□□ 0.79
Copb2-201ENSMUST00000035033 Mroh2bQ7M6Y6 1581 aa20■□□□□ 0.79
Copb2-201ENSMUST00000035033 Dhx29Q6PGC1 1365 aaKnown RBP20■□□□□ 0.79
Copb2-201ENSMUST00000035033 Kif21aQ9QXL2 1672 aa19.93■□□□□ 0.78
Copb2-201ENSMUST00000035033 Eea1Q8BL66 1411 aa19.89■□□□□ 0.77
Copb2-201ENSMUST00000035033 UbtfP25976 765 aaKnown RBP19.89■□□□□ 0.77
Copb2-201ENSMUST00000035033 Samd9lQ69Z37 1561 aa19.87■□□□□ 0.77
Copb2-201ENSMUST00000035033 Crocc2F6XLV1 1638 aa19.86■□□□□ 0.77
Copb2-201ENSMUST00000035033 AqrQ8CFQ3 1481 aaKnown RBP19.86■□□□□ 0.77
Copb2-201ENSMUST00000035033 Setd5Q5XJV7 1441 aa19.85■□□□□ 0.77
Copb2-201ENSMUST00000035033 Mier1Q5UAK0 511 aa19.84■□□□□ 0.77
Copb2-201ENSMUST00000035033 Plekhg3Q4VAC9 1341 aa19.83■□□□□ 0.77
Copb2-201ENSMUST00000035033 Ap3b1Q9Z1T1 1105 aa19.82■□□□□ 0.76
Copb2-201ENSMUST00000035033 Arap1Q4LDD4 1452 aa19.82■□□□□ 0.76
Copb2-201ENSMUST00000035033 Carmil1Q6EDY6 1374 aa19.81■□□□□ 0.76
Copb2-201ENSMUST00000035033 SynmQ70IV5 1561 aa19.79■□□□□ 0.76
Copb2-201ENSMUST00000035033 Rad54l2Q99NG0 1466 aa19.79■□□□□ 0.76
Copb2-201ENSMUST00000035033 Ankrd26Q811D2 1581 aa19.75■□□□□ 0.75
Copb2-201ENSMUST00000035033 Plb1Q3TTY0 1478 aa19.74■□□□□ 0.75
Copb2-201ENSMUST00000035033 Arhgef5E9Q7D5 1581 aa19.73■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 82.6 ms