RNA–Protein interactions for RNA: ENSMUST00000034879.4

Hmg20a-201, Transcript of High mobility group protein 20A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmg20a, Length 3,778 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20a-201ENSMUST00000034879 Gm35339A0A140LHH9 1649 aa15.36■□□□□ 0.05
Hmg20a-201ENSMUST00000034879 NischQ80TM9 1593 aa15.2■□□□□ 0.02
Hmg20a-201ENSMUST00000034879 Abcc9P70170 1546 aa14.8□□□□□ -0.04
Hmg20a-201ENSMUST00000034879 Abcc8B2RUS7 1588 aa14.6□□□□□ -0.07
Hmg20a-201ENSMUST00000034879 ScribQ80U72 1612 aa13.81□□□□□ -0.2
Hmg20a-201ENSMUST00000034879 Dcaf1Q80TR8 1506 aa13.7□□□□□ -0.22
Hmg20a-201ENSMUST00000034879 NacadQ5SWP3 1504 aa13.49□□□□□ -0.25
Hmg20a-201ENSMUST00000034879 Kdm5dQ62240 1548 aa13.45□□□□□ -0.26
Hmg20a-201ENSMUST00000034879 Ccdc180J3QNE4 1664 aa13.39□□□□□ -0.27
Hmg20a-201ENSMUST00000034879 Rhox8Q6VSS7 320 aa13.32□□□□□ -0.28
Hmg20a-201ENSMUST00000034879 Rb1cc1Q9ESK9 1588 aa13.27□□□□□ -0.28
Hmg20a-201ENSMUST00000034879 Sycp2Q9CUU3 1500 aa13.19□□□□□ -0.3
Hmg20a-201ENSMUST00000034879 Crybg2B7ZCC2 1516 aa13.17□□□□□ -0.3
Hmg20a-201ENSMUST00000034879 Baz1aO88379 1555 aa13.16□□□□□ -0.3
Hmg20a-201ENSMUST00000034879 Rtl1Q7M732 1744 aa13.14□□□□□ -0.31
Hmg20a-201ENSMUST00000034879 BicraF8VPZ9 1578 aa12.89□□□□□ -0.35
Hmg20a-201ENSMUST00000034879 Smarca2Q6DIC0 1577 aa12.82□□□□□ -0.36
Hmg20a-201ENSMUST00000034879 Zcchc6Q5BLK4 1491 aaKnown RBP12.77□□□□□ -0.37
Hmg20a-201ENSMUST00000034879 Smarca4Q3TKT4 1613 aaKnown RBP12.52□□□□□ -0.4
Hmg20a-201ENSMUST00000034879 Pds5bQ4VA53 1446 aaKnown RBP12.52□□□□□ -0.4
Hmg20a-201ENSMUST00000034879 Cecr2E9Q2Z1 1453 aa12.49□□□□□ -0.41
Hmg20a-201ENSMUST00000034879 Brd4Q9ESU6 1400 aaKnown RBP12.48□□□□□ -0.41
Hmg20a-201ENSMUST00000034879 Atad2bE9Q166 1460 aaKnown RBP12.48□□□□□ -0.41
Hmg20a-201ENSMUST00000034879 Trim41Q5NCC3 630 aa12.4□□□□□ -0.43
Hmg20a-201ENSMUST00000034879 Cttnbp2B9EJA2 1648 aa12.39□□□□□ -0.43
Hmg20a-201ENSMUST00000034879 Iqgap2Q3UQ44 1575 aa12.37□□□□□ -0.43
Hmg20a-201ENSMUST00000034879 Ccdc136Q3TVA9 1136 aa12.36□□□□□ -0.43
Hmg20a-201ENSMUST00000034879 CftrP26361 1476 aa12.36□□□□□ -0.43
Hmg20a-201ENSMUST00000034879 Synj1Q8CHC4 1574 aa12.34□□□□□ -0.43
Hmg20a-201ENSMUST00000034879 Ehmt2Q9Z148 1263 aaKnown RBP12.29□□□□□ -0.44
Hmg20a-201ENSMUST00000034879 Thoc2B1AZI6 1594 aaKnown RBP12.26□□□□□ -0.45
Hmg20a-201ENSMUST00000034879 Ercc6F8VPZ5 1481 aa12.24□□□□□ -0.45
Hmg20a-201ENSMUST00000034879 Wdr62Q3U3T8 1523 aa12.22□□□□□ -0.45
Hmg20a-201ENSMUST00000034879 Frmpd1A2AKB4 1549 aa12.16□□□□□ -0.46
Hmg20a-201ENSMUST00000034879 Golga3P55937 1487 aa12.15□□□□□ -0.46
Hmg20a-201ENSMUST00000034879 Baz1bQ9Z277 1479 aa12.14□□□□□ -0.47
Hmg20a-201ENSMUST00000034879 Top2bQ64511 1612 aa12.13□□□□□ -0.47
Hmg20a-201ENSMUST00000034879 HrcG5E8J6 738 aa12.12□□□□□ -0.47
Hmg20a-201ENSMUST00000034879 Rpgrip1Q9EPQ2 1331 aa12.09□□□□□ -0.47
Hmg20a-201ENSMUST00000034879 Fam135aQ6NS59 1506 aa12.08□□□□□ -0.48
Hmg20a-201ENSMUST00000034879 Phldb1Q6PDH0 1371 aaKnown RBP12.04□□□□□ -0.48
Hmg20a-201ENSMUST00000034879 Esf1Q3V1V3 845 aaKnown RBP12.03□□□□□ -0.48
Hmg20a-201ENSMUST00000034879 Unc13aQ4KUS2 1712 aa12.03□□□□□ -0.48
Hmg20a-201ENSMUST00000034879 Cc2d2aQ8CFW7 1633 aa12.01□□□□□ -0.49
Hmg20a-201ENSMUST00000034879 Fmn1Q05860 1466 aa11.97□□□□□ -0.49
Hmg20a-201ENSMUST00000034879 Lamc3Q9R0B6 1581 aa11.96□□□□□ -0.49
Hmg20a-201ENSMUST00000034879 TnnQ80Z71 1560 aa11.96□□□□□ -0.49
Hmg20a-201ENSMUST00000034879 Rsf1E9PWW9 1441 aaKnown RBP11.93□□□□□ -0.5
Hmg20a-201ENSMUST00000034879 Cngb1E1AZ71 1325 aa11.91□□□□□ -0.5
Hmg20a-201ENSMUST00000034879 Cep164Q5DU05 1446 aa11.9□□□□□ -0.5
Hmg20a-201ENSMUST00000034879 Ccdc88bQ4QRL3 1481 aa11.82□□□□□ -0.52
Hmg20a-201ENSMUST00000034879 Kif15Q6P9L6 1387 aa11.81□□□□□ -0.52
Hmg20a-201ENSMUST00000034879 Top2aQ01320 1528 aaKnown RBP11.81□□□□□ -0.52
Hmg20a-201ENSMUST00000034879 Ubl4bQ9CQ84 188 aa11.8□□□□□ -0.52
Hmg20a-201ENSMUST00000034879 Acin1Q9JIX8 1338 aaKnown RBP11.78□□□□□ -0.52
Hmg20a-201ENSMUST00000034879 Camsap1A2AHC3 1581 aa11.75□□□□□ -0.53
Hmg20a-201ENSMUST00000034879 Mrc2Q64449 1479 aa11.75□□□□□ -0.53
Hmg20a-201ENSMUST00000034879 Dnajc5bQ9CQ94 199 aa11.75□□□□□ -0.53
Hmg20a-201ENSMUST00000034879 Ccdc18Q640L5 1455 aa11.75□□□□□ -0.53
Hmg20a-201ENSMUST00000034879 Cux2P70298 1426 aa11.73□□□□□ -0.53
Hmg20a-201ENSMUST00000034879 Chic1Q8CBW7 227 aa11.72□□□□□ -0.53
Hmg20a-201ENSMUST00000034879 NrkQ9R0G8 1455 aa11.65□□□□□ -0.54
Hmg20a-201ENSMUST00000034879 Gab3Q8BSM5 595 aa11.64□□□□□ -0.55
Hmg20a-201ENSMUST00000034879 Grin2bQ01097 1482 aa11.62□□□□□ -0.55
Hmg20a-201ENSMUST00000034879 Npm1Q61937 292 aaKnown RBP11.62□□□□□ -0.55
Hmg20a-201ENSMUST00000034879 DiexfQ8BTT6 772 aaKnown RBP11.62□□□□□ -0.55
Hmg20a-201ENSMUST00000034879 Rapgef2Q8CHG7 1496 aa11.6□□□□□ -0.55
Hmg20a-201ENSMUST00000034879 LrpprcQ6PB66 1392 aaKnown RBP11.6□□□□□ -0.55
Hmg20a-201ENSMUST00000034879 PogzQ8BZH4 1409 aaKnown RBP11.58□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Shroom4Q1W617 1475 aa11.58□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Kif21aQ9QXL2 1672 aa11.57□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Efcab5A0JP43 1406 aa11.57□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Zeb1Q64318 1117 aa11.55□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Eif4g1Q6NZJ6 1600 aaKnown RBP11.53□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Pcgf6Q99NA9 353 aa11.53□□□□□ -0.56
Hmg20a-201ENSMUST00000034879 Crocc2F6XLV1 1638 aa11.52□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 Dhx29Q6PGC1 1365 aaKnown RBP11.52□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 Duox2A2AQ99 1517 aa11.51□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 Map3k1P53349 1493 aa11.5□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 Il27Q8K3I6 234 aa11.48□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 Cep162Q6ZQ06 1403 aa11.47□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 PtprkP35822 1457 aa11.46□□□□□ -0.57
Hmg20a-201ENSMUST00000034879 Gpatch8A2A6A1 1505 aa11.45□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 AqrQ8CFQ3 1481 aaKnown RBP11.44□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Lrriq1Q0P5X1 1673 aa11.44□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Pbrm1Q8BSQ9 1634 aaKnown RBP11.44□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Mroh2bQ7M6Y6 1581 aa11.43□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Plppr3Q7TPB0 716 aa11.42□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Arhgap35Q91YM2 1499 aa11.42□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Ift140E9PY46 1464 aa11.42□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Samd9lQ69Z37 1561 aa11.41□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Urb2E9Q7L1 1524 aaKnown RBP11.41□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 SynmQ70IV5 1561 aa11.4□□□□□ -0.58
Hmg20a-201ENSMUST00000034879 Npm2Q80W85 207 aa11.39□□□□□ -0.59
Hmg20a-201ENSMUST00000034879 Plb1Q3TTY0 1478 aa11.39□□□□□ -0.59
Hmg20a-201ENSMUST00000034879 Supt5hO55201 1082 aaKnown RBP11.35□□□□□ -0.59
Hmg20a-201ENSMUST00000034879 Eif4g3Q80XI3 1579 aaKnown RBP11.35□□□□□ -0.59
Hmg20a-201ENSMUST00000034879 Carmil1Q6EDY6 1374 aa11.34□□□□□ -0.59
Hmg20a-201ENSMUST00000034879 Polr1aO35134 1717 aaKnown RBP11.33□□□□□ -0.6
Hmg20a-201ENSMUST00000034879 Disp1Q3TDN0 1521 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 157.4 ms