RNA–Protein interactions for RNA: ENSMUST00000030164.7

Vcp-201, Transcript of Transitional endoplasmic reticulum ATPase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcp, Length 3,316 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcp-201ENSMUST00000030164 NischQ80TM9 1593 aa22.7■■□□□ 1.22
Vcp-201ENSMUST00000030164 Gm35339A0A140LHH9 1649 aa22.5■■□□□ 1.19
Vcp-201ENSMUST00000030164 Abcc9P70170 1546 aa21.94■■□□□ 1.1
Vcp-201ENSMUST00000030164 Abcc8B2RUS7 1588 aa21.7■■□□□ 1.06
Vcp-201ENSMUST00000030164 Rhox8Q6VSS7 320 aa21.33■■□□□ 1
Vcp-201ENSMUST00000030164 ScribQ80U72 1612 aa20.55■□□□□ 0.88
Vcp-201ENSMUST00000030164 Kdm5dQ62240 1548 aa20.08■□□□□ 0.8
Vcp-201ENSMUST00000030164 Dcaf1Q80TR8 1506 aa20.03■□□□□ 0.8
Vcp-201ENSMUST00000030164 NacadQ5SWP3 1504 aa20.03■□□□□ 0.8
Vcp-201ENSMUST00000030164 Rb1cc1Q9ESK9 1588 aa19.85■□□□□ 0.77
Vcp-201ENSMUST00000030164 Ccdc136Q3TVA9 1136 aa19.76■□□□□ 0.75
Vcp-201ENSMUST00000030164 Rtl1Q7M732 1744 aa19.64■□□□□ 0.73
Vcp-201ENSMUST00000030164 Sycp2Q9CUU3 1500 aa19.59■□□□□ 0.73
Vcp-201ENSMUST00000030164 Baz1aO88379 1555 aa19.56■□□□□ 0.72
Vcp-201ENSMUST00000030164 Ccdc180J3QNE4 1664 aa19.54■□□□□ 0.72
Vcp-201ENSMUST00000030164 Zcchc6Q5BLK4 1491 aaKnown RBP19.4■□□□□ 0.7
Vcp-201ENSMUST00000030164 Ehmt2Q9Z148 1263 aaKnown RBP19.35■□□□□ 0.69
Vcp-201ENSMUST00000030164 Crybg2B7ZCC2 1516 aa19.26■□□□□ 0.67
Vcp-201ENSMUST00000030164 BicraF8VPZ9 1578 aa19.21■□□□□ 0.67
Vcp-201ENSMUST00000030164 Trim41Q5NCC3 630 aa19.07■□□□□ 0.64
Vcp-201ENSMUST00000030164 Smarca2Q6DIC0 1577 aa19.01■□□□□ 0.63
Vcp-201ENSMUST00000030164 HrcG5E8J6 738 aa18.97■□□□□ 0.63
Vcp-201ENSMUST00000030164 Cngb1E1AZ71 1325 aa18.88■□□□□ 0.61
Vcp-201ENSMUST00000030164 Cecr2E9Q2Z1 1453 aa18.85■□□□□ 0.61
Vcp-201ENSMUST00000030164 Gab3Q8BSM5 595 aa18.76■□□□□ 0.59
Vcp-201ENSMUST00000030164 Rpgrip1Q9EPQ2 1331 aa18.69■□□□□ 0.58
Vcp-201ENSMUST00000030164 Brd4Q9ESU6 1400 aaKnown RBP18.65■□□□□ 0.58
Vcp-201ENSMUST00000030164 Esf1Q3V1V3 845 aaKnown RBP18.64■□□□□ 0.57
Vcp-201ENSMUST00000030164 Acin1Q9JIX8 1338 aaKnown RBP18.63■□□□□ 0.57
Vcp-201ENSMUST00000030164 Pds5bQ4VA53 1446 aaKnown RBP18.62■□□□□ 0.57
Vcp-201ENSMUST00000030164 Smarca4Q3TKT4 1613 aaKnown RBP18.61■□□□□ 0.57
Vcp-201ENSMUST00000030164 Atad2bE9Q166 1460 aaKnown RBP18.55■□□□□ 0.56
Vcp-201ENSMUST00000030164 Chic1Q8CBW7 227 aa18.52■□□□□ 0.56
Vcp-201ENSMUST00000030164 Synj1Q8CHC4 1574 aa18.51■□□□□ 0.55
Vcp-201ENSMUST00000030164 CftrP26361 1476 aa18.49■□□□□ 0.55
Vcp-201ENSMUST00000030164 Iqgap2Q3UQ44 1575 aa18.45■□□□□ 0.54
Vcp-201ENSMUST00000030164 Cttnbp2B9EJA2 1648 aa18.37■□□□□ 0.53
Vcp-201ENSMUST00000030164 Cep164Q5DU05 1446 aa18.34■□□□□ 0.53
Vcp-201ENSMUST00000030164 Ercc6F8VPZ5 1481 aa18.31■□□□□ 0.52
Vcp-201ENSMUST00000030164 Rsf1E9PWW9 1441 aaKnown RBP18.27■□□□□ 0.52
Vcp-201ENSMUST00000030164 Golga3P55937 1487 aa18.21■□□□□ 0.51
Vcp-201ENSMUST00000030164 Frmpd1A2AKB4 1549 aa18.19■□□□□ 0.5
Vcp-201ENSMUST00000030164 Ccdc88bQ4QRL3 1481 aa18.16■□□□□ 0.5
Vcp-201ENSMUST00000030164 Wdr62Q3U3T8 1523 aa18.16■□□□□ 0.5
Vcp-201ENSMUST00000030164 Thoc2B1AZI6 1594 aaKnown RBP18.13■□□□□ 0.49
Vcp-201ENSMUST00000030164 Myt1lP97500 1187 aa18.11■□□□□ 0.49
Vcp-201ENSMUST00000030164 Dnajc5bQ9CQ94 199 aa18.07■□□□□ 0.48
Vcp-201ENSMUST00000030164 Phldb1Q6PDH0 1371 aaKnown RBP18■□□□□ 0.47
Vcp-201ENSMUST00000030164 Zeb1Q64318 1117 aa17.99■□□□□ 0.47
Vcp-201ENSMUST00000030164 Cc2d2aQ8CFW7 1633 aa17.99■□□□□ 0.47
Vcp-201ENSMUST00000030164 Ubl4bQ9CQ84 188 aa17.98■□□□□ 0.47
Vcp-201ENSMUST00000030164 Npm2Q80W85 207 aa17.98■□□□□ 0.47
Vcp-201ENSMUST00000030164 Pcgf6Q99NA9 353 aa17.97■□□□□ 0.47
Vcp-201ENSMUST00000030164 Top2bQ64511 1612 aa17.96■□□□□ 0.47
Vcp-201ENSMUST00000030164 UbtfP25976 765 aaKnown RBP17.95■□□□□ 0.46
Vcp-201ENSMUST00000030164 Kif15Q6P9L6 1387 aa17.9■□□□□ 0.46
Vcp-201ENSMUST00000030164 Mier1Q5UAK0 511 aa17.88■□□□□ 0.45
Vcp-201ENSMUST00000030164 Il27Q8K3I6 234 aa17.88■□□□□ 0.45
Vcp-201ENSMUST00000030164 Unc13aQ4KUS2 1712 aa17.85■□□□□ 0.45
Vcp-201ENSMUST00000030164 Fam135aQ6NS59 1506 aa17.84■□□□□ 0.45
Vcp-201ENSMUST00000030164 Fmn1Q05860 1466 aa17.84■□□□□ 0.45
Vcp-201ENSMUST00000030164 Supt5hO55201 1082 aaKnown RBP17.83■□□□□ 0.44
Vcp-201ENSMUST00000030164 Lamc3Q9R0B6 1581 aa17.72■□□□□ 0.43
Vcp-201ENSMUST00000030164 Cux2P70298 1426 aa17.71■□□□□ 0.43
Vcp-201ENSMUST00000030164 Npm1Q61937 292 aaKnown RBP17.7■□□□□ 0.42
Vcp-201ENSMUST00000030164 NefmP08553 848 aa17.65■□□□□ 0.42
Vcp-201ENSMUST00000030164 TnnQ80Z71 1560 aa17.64■□□□□ 0.42
Vcp-201ENSMUST00000030164 Plekhg3Q4VAC9 1341 aa17.63■□□□□ 0.41
Vcp-201ENSMUST00000030164 Ap3b1Q9Z1T1 1105 aa17.62■□□□□ 0.41
Vcp-201ENSMUST00000030164 Ccdc18Q640L5 1455 aa17.62■□□□□ 0.41
Vcp-201ENSMUST00000030164 Baz1bQ9Z277 1479 aa17.6■□□□□ 0.41
Vcp-201ENSMUST00000030164 Top2aQ01320 1528 aaKnown RBP17.58■□□□□ 0.41
Vcp-201ENSMUST00000030164 Mrc2Q64449 1479 aa17.56■□□□□ 0.4
Vcp-201ENSMUST00000030164 Wdr66E9Q743 1299 aa17.55■□□□□ 0.4
Vcp-201ENSMUST00000030164 Camsap1A2AHC3 1581 aa17.53■□□□□ 0.4
Vcp-201ENSMUST00000030164 Ppargc1bQ8VHJ7 1014 aa17.52■□□□□ 0.39
Vcp-201ENSMUST00000030164 Rapgef2Q8CHG7 1496 aa17.49■□□□□ 0.39
Vcp-201ENSMUST00000030164 Cep162Q6ZQ06 1403 aa17.48■□□□□ 0.39
Vcp-201ENSMUST00000030164 Clip1Q922J3 1391 aa17.46■□□□□ 0.39
Vcp-201ENSMUST00000030164 Las1lA2BE28 776 aaKnown RBP17.44■□□□□ 0.38
Vcp-201ENSMUST00000030164 LrpprcQ6PB66 1392 aaKnown RBP17.43■□□□□ 0.38
Vcp-201ENSMUST00000030164 Sall2Q9QX96 1004 aa17.4■□□□□ 0.38
Vcp-201ENSMUST00000030164 Grin2bQ01097 1482 aa17.38■□□□□ 0.37
Vcp-201ENSMUST00000030164 Dhx29Q6PGC1 1365 aaKnown RBP17.38■□□□□ 0.37
Vcp-201ENSMUST00000030164 PtprkP35822 1457 aa17.35■□□□□ 0.37
Vcp-201ENSMUST00000030164 Kif21aQ9QXL2 1672 aa17.32■□□□□ 0.36
Vcp-201ENSMUST00000030164 PogzQ8BZH4 1409 aaKnown RBP17.32■□□□□ 0.36
Vcp-201ENSMUST00000030164 NrkQ9R0G8 1455 aa17.3■□□□□ 0.36
Vcp-201ENSMUST00000030164 Duox2A2AQ99 1517 aa17.29■□□□□ 0.36
Vcp-201ENSMUST00000030164 Shroom4Q1W617 1475 aa17.29■□□□□ 0.36
Vcp-201ENSMUST00000030164 Aebp2Q9Z248 504 aaKnown RBP17.27■□□□□ 0.36
Vcp-201ENSMUST00000030164 Lmod2Q3UHZ5 550 aa17.25■□□□□ 0.35
Vcp-201ENSMUST00000030164 Eid3Q3V124 375 aa17.25■□□□□ 0.35
Vcp-201ENSMUST00000030164 Efcab5A0JP43 1406 aa17.24■□□□□ 0.35
Vcp-201ENSMUST00000030164 Neurod1Q60867 357 aa17.21■□□□□ 0.35
Vcp-201ENSMUST00000030164 Crocc2F6XLV1 1638 aa17.2■□□□□ 0.34
Vcp-201ENSMUST00000030164 Setd5Q5XJV7 1441 aa17.19■□□□□ 0.34
Vcp-201ENSMUST00000030164 TonslQ6NZL6 1363 aa17.18■□□□□ 0.34
Vcp-201ENSMUST00000030164 Plb1Q3TTY0 1478 aa17.18■□□□□ 0.34
Vcp-201ENSMUST00000030164 Fam50aQ9WV03 339 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms