RNA–Protein interactions for RNA: ENSMUST00000029574.12

Vcam1-201, Transcript of Vascular cell adhesion protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcam1, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1-201ENSMUST00000029574 Gm35339A0A140LHH9 1649 aa11.18□□□□□ -0.62
Vcam1-201ENSMUST00000029574 NischQ80TM9 1593 aa10.83□□□□□ -0.68
Vcam1-201ENSMUST00000029574 Abcc9P70170 1546 aa10.63□□□□□ -0.71
Vcam1-201ENSMUST00000029574 Abcc8B2RUS7 1588 aa10.49□□□□□ -0.73
Vcam1-201ENSMUST00000029574 Chic1Q8CBW7 227 aa9.99□□□□□ -0.81
Vcam1-201ENSMUST00000029574 ScribQ80U72 1612 aa9.97□□□□□ -0.81
Vcam1-201ENSMUST00000029574 Dcaf1Q80TR8 1506 aa9.89□□□□□ -0.83
Vcam1-201ENSMUST00000029574 Ccdc180J3QNE4 1664 aa9.71□□□□□ -0.85
Vcam1-201ENSMUST00000029574 Kdm5dQ62240 1548 aa9.61□□□□□ -0.87
Vcam1-201ENSMUST00000029574 NacadQ5SWP3 1504 aa9.59□□□□□ -0.87
Vcam1-201ENSMUST00000029574 Crybg2B7ZCC2 1516 aa9.48□□□□□ -0.89
Vcam1-201ENSMUST00000029574 Sycp2Q9CUU3 1500 aa9.43□□□□□ -0.9
Vcam1-201ENSMUST00000029574 Rb1cc1Q9ESK9 1588 aa9.43□□□□□ -0.9
Vcam1-201ENSMUST00000029574 Baz1aO88379 1555 aa9.39□□□□□ -0.91
Vcam1-201ENSMUST00000029574 Mapk8ip2Q9ERE9 830 aa9.39□□□□□ -0.91
Vcam1-201ENSMUST00000029574 Rtl1Q7M732 1744 aa9.35□□□□□ -0.91
Vcam1-201ENSMUST00000029574 BicraF8VPZ9 1578 aa9.3□□□□□ -0.92
Vcam1-201ENSMUST00000029574 Smarca2Q6DIC0 1577 aa9.21□□□□□ -0.93
Vcam1-201ENSMUST00000029574 Phf23Q8BSN5 401 aa9.21□□□□□ -0.94
Vcam1-201ENSMUST00000029574 Zcchc6Q5BLK4 1491 aaKnown RBP9.16□□□□□ -0.94
Vcam1-201ENSMUST00000029574 Plppr3Q7TPB0 716 aa9.05□□□□□ -0.96
Vcam1-201ENSMUST00000029574 Rhox8Q6VSS7 320 aa9.03□□□□□ -0.96
Vcam1-201ENSMUST00000029574 Rpgrip1Q9EPQ2 1331 aa9.01□□□□□ -0.97
Vcam1-201ENSMUST00000029574 Cecr2E9Q2Z1 1453 aa8.92□□□□□ -0.98
Vcam1-201ENSMUST00000029574 Smarca4Q3TKT4 1613 aaKnown RBP8.9□□□□□ -0.98
Vcam1-201ENSMUST00000029574 DiexfQ8BTT6 772 aaKnown RBP8.9□□□□□ -0.98
Vcam1-201ENSMUST00000029574 Pcgf6Q99NA9 353 aa8.88□□□□□ -0.99
Vcam1-201ENSMUST00000029574 Atad2bE9Q166 1460 aaKnown RBP8.83□□□□□ -1
Vcam1-201ENSMUST00000029574 Cttnbp2B9EJA2 1648 aa8.82□□□□□ -1
Vcam1-201ENSMUST00000029574 Synj1Q8CHC4 1574 aa8.81□□□□□ -1
Vcam1-201ENSMUST00000029574 Pds5bQ4VA53 1446 aaKnown RBP8.8□□□□□ -1
Vcam1-201ENSMUST00000029574 CftrP26361 1476 aa8.8□□□□□ -1
Vcam1-201ENSMUST00000029574 Thoc2B1AZI6 1594 aaKnown RBP8.8□□□□□ -1
Vcam1-201ENSMUST00000029574 Myt1Q8CFC2 1127 aa8.79□□□□□ -1
Vcam1-201ENSMUST00000029574 Iqgap2Q3UQ44 1575 aa8.79□□□□□ -1
Vcam1-201ENSMUST00000029574 Gab3Q8BSM5 595 aa8.77□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Brd4Q9ESU6 1400 aaKnown RBP8.76□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Top2bQ64511 1612 aa8.75□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Wdr62Q3U3T8 1523 aa8.73□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Kcna4Q61423 654 aa8.7□□□□□ -1.02
Vcam1-201ENSMUST00000029574 Unc13aQ4KUS2 1712 aa8.69□□□□□ -1.02
Vcam1-201ENSMUST00000029574 CenpbP27790 599 aa8.69□□□□□ -1.02
Vcam1-201ENSMUST00000029574 Frmpd1A2AKB4 1549 aa8.67□□□□□ -1.02
Vcam1-201ENSMUST00000029574 Baz1bQ9Z277 1479 aa8.65□□□□□ -1.02
Vcam1-201ENSMUST00000029574 TnnQ80Z71 1560 aa8.64□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Fam135aQ6NS59 1506 aa8.63□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Las1lA2BE28 776 aaKnown RBP8.61□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Bcl11aQ9QYE3 773 aa8.6□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Golga3P55937 1487 aa8.59□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Amer1Q7TS75 1132 aa8.59□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Lamc3Q9R0B6 1581 aa8.56□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Trim41Q5NCC3 630 aa8.55□□□□□ -1.04
Vcam1-201ENSMUST00000029574 HrcG5E8J6 738 aa8.54□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Senp3Q9EP97 568 aaKnown RBP8.53□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Ercc6F8VPZ5 1481 aa8.52□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Cc2d2aQ8CFW7 1633 aa8.5□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Ccdc136Q3TVA9 1136 aa8.5□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Fmn1Q05860 1466 aa8.46□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Top2aQ01320 1528 aaKnown RBP8.45□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Phldb1Q6PDH0 1371 aaKnown RBP8.45□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Rsf1E9PWW9 1441 aaKnown RBP8.45□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Acin1Q9JIX8 1338 aaKnown RBP8.42□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Cep164Q5DU05 1446 aa8.41□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Ccdc88bQ4QRL3 1481 aa8.41□□□□□ -1.06
Vcam1-201ENSMUST00000029574 PrkcshO08795 521 aa8.41□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Neurod1Q60867 357 aa8.4□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Eif4g1Q6NZJ6 1600 aaKnown RBP8.4□□□□□ -1.06
Vcam1-201ENSMUST00000029574 1700123L14RikQ3V2K7 440 aa8.39□□□□□ -1.07
Vcam1-201ENSMUST00000029574 Gpatch8A2A6A1 1505 aa8.38□□□□□ -1.07
Vcam1-201ENSMUST00000029574 Ube2uB1AUC4 352 aa8.37□□□□□ -1.07
Vcam1-201ENSMUST00000029574 Camsap1A2AHC3 1581 aa8.37□□□□□ -1.07
Vcam1-201ENSMUST00000029574 NrkQ9R0G8 1455 aa8.29□□□□□ -1.08
Vcam1-201ENSMUST00000029574 Dnajc5bQ9CQ94 199 aa8.29□□□□□ -1.08
Vcam1-201ENSMUST00000029574 Rapgef2Q8CHG7 1496 aa8.29□□□□□ -1.08
Vcam1-201ENSMUST00000029574 Grin2bQ01097 1482 aa8.26□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Mrc2Q64449 1479 aa8.26□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Kif21aQ9QXL2 1672 aa8.22□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Kif15Q6P9L6 1387 aa8.22□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Cux2P70298 1426 aa8.21□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Shroom4Q1W617 1475 aa8.2□□□□□ -1.1
Vcam1-201ENSMUST00000029574 PogzQ8BZH4 1409 aaKnown RBP8.2□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Map3k1P53349 1493 aa8.19□□□□□ -1.1
Vcam1-201ENSMUST00000029574 PtprkP35822 1457 aa8.18□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Efcab5A0JP43 1406 aa8.18□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Ccdc18Q640L5 1455 aa8.18□□□□□ -1.1
Vcam1-201ENSMUST00000029574 AqrQ8CFQ3 1481 aaKnown RBP8.17□□□□□ -1.1
Vcam1-201ENSMUST00000029574 CatipB9EKE5 520 aa8.16□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Supt5hO55201 1082 aaKnown RBP8.16□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Csrnp3P59055 597 aa8.15□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Esf1Q3V1V3 845 aaKnown RBP8.15□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Arhgap35Q91YM2 1499 aa8.14□□□□□ -1.11
Vcam1-201ENSMUST00000029574 LrpprcQ6PB66 1392 aaKnown RBP8.14□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Pbrm1Q8BSQ9 1634 aaKnown RBP8.14□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Samd9lQ69Z37 1561 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Mroh2bQ7M6Y6 1581 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Ubl4bQ9CQ84 188 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Crocc2F6XLV1 1638 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Duox2A2AQ99 1517 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Lrriq1Q0P5X1 1673 aa8.12□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Aplp2Q06335 707 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 105.5 ms