RNA–Protein interactions for RNA: ENSMUST00000029444.12

Trim33-201, Transcript of E3 ubiquitin-protein ligase TRIM33, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim33, Length 8,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33-201ENSMUST00000029444 Rhox8Q6VSS7 320 aa35.31■■■■□ 3.24
Trim33-201ENSMUST00000029444 Rpgrip1Q9EPQ2 1331 aa34.53■■■■□ 3.12
Trim33-201ENSMUST00000029444 Cngb1E1AZ71 1325 aa33.98■■■■□ 3.03
Trim33-201ENSMUST00000029444 Las1lA2BE28 776 aaKnown RBP33.54■■■□□ 2.96
Trim33-201ENSMUST00000029444 Pelp1Q9DBD5 1123 aaKnown RBP33.46■■■□□ 2.95
Trim33-201ENSMUST00000029444 Wdr66E9Q743 1299 aa32.06■■■□□ 2.72
Trim33-201ENSMUST00000029444 Rtl1Q7M732 1744 aa31.98■■■□□ 2.71
Trim33-201ENSMUST00000029444 Stra8P70278 393 aa31.58■■■□□ 2.65
Trim33-201ENSMUST00000029444 Ube2uB1AUC4 352 aa31.54■■■□□ 2.64
Trim33-201ENSMUST00000029444 CenpbP27790 599 aa31.4■■■□□ 2.62
Trim33-201ENSMUST00000029444 Esf1Q3V1V3 845 aaKnown RBP31.36■■■□□ 2.61
Trim33-201ENSMUST00000029444 Amer1Q7TS75 1132 aa31.31■■■□□ 2.6
Trim33-201ENSMUST00000029444 Ehmt2Q9Z148 1263 aaKnown RBP31.28■■■□□ 2.6
Trim33-201ENSMUST00000029444 Ccdc180J3QNE4 1664 aa31.26■■■□□ 2.59
Trim33-201ENSMUST00000029444 4930567H17RikQ3V0K5 233 aa31.22■■■□□ 2.59
Trim33-201ENSMUST00000029444 Trim41Q5NCC3 630 aa31.15■■■□□ 2.58
Trim33-201ENSMUST00000029444 Zeb1Q64318 1117 aa31.13■■■□□ 2.57
Trim33-201ENSMUST00000029444 Myt1Q8CFC2 1127 aa31.09■■■□□ 2.57
Trim33-201ENSMUST00000029444 NefmP08553 848 aa30.94■■■□□ 2.54
Trim33-201ENSMUST00000029444 Npm2Q80W85 207 aa30.92■■■□□ 2.54
Trim33-201ENSMUST00000029444 Ccdc136Q3TVA9 1136 aa30.81■■■□□ 2.52
Trim33-201ENSMUST00000029444 Acin1Q9JIX8 1338 aaKnown RBP30.52■■■□□ 2.48
Trim33-201ENSMUST00000029444 NischQ80TM9 1593 aa30.45■■■□□ 2.46
Trim33-201ENSMUST00000029444 Gab3Q8BSM5 595 aa30.36■■■□□ 2.45
Trim33-201ENSMUST00000029444 Tnnt3Q9QZ47 272 aa30.34■■■□□ 2.45
Trim33-201ENSMUST00000029444 Anp32bQ9EST5 272 aaKnown RBP30.32■■■□□ 2.44
Trim33-201ENSMUST00000029444 Myt1lP97500 1187 aa30.28■■■□□ 2.44
Trim33-201ENSMUST00000029444 NeflP08551 543 aa30.19■■■□□ 2.42
Trim33-201ENSMUST00000029444 Rtl5Q5DTT4 599 aa30.16■■■□□ 2.42
Trim33-201ENSMUST00000029444 4933416C03RikQ3V063 378 aa29.99■■■□□ 2.39
Trim33-201ENSMUST00000029444 Cdk11bP24788 784 aaKnown RBP29.98■■■□□ 2.39
Trim33-201ENSMUST00000029444 NrdcQ8BHG1 1161 aa29.94■■■□□ 2.38
Trim33-201ENSMUST00000029444 UbtfP25976 765 aaKnown RBP29.79■■■□□ 2.36
Trim33-201ENSMUST00000029444 Slc24a1Q91WD8 1130 aa29.79■■■□□ 2.36
Trim33-201ENSMUST00000029444 Ttbk1Q6PCN3 1308 aa29.65■■■□□ 2.34
Trim33-201ENSMUST00000029444 HrcG5E8J6 738 aa29.62■■■□□ 2.33
Trim33-201ENSMUST00000029444 Nop58Q6DFW4 536 aaKnown RBP29.41■■■□□ 2.3
Trim33-201ENSMUST00000029444 NclP09405 707 aaKnown RBP29.36■■■□□ 2.29
Trim33-201ENSMUST00000029444 Neurod1Q60867 357 aa29.15■■■□□ 2.26
Trim33-201ENSMUST00000029444 Os9Q8K2C7 672 aa29.13■■■□□ 2.25
Trim33-201ENSMUST00000029444 Pcgf6Q99NA9 353 aa29.12■■■□□ 2.25
Trim33-201ENSMUST00000029444 Fam50aQ9WV03 339 aaKnown RBP29.04■■■□□ 2.24
Trim33-201ENSMUST00000029444 TonslQ6NZL6 1363 aa29.04■■■□□ 2.24
Trim33-201ENSMUST00000029444 Hdac5Q9Z2V6 1113 aa28.96■■■□□ 2.23
Trim33-201ENSMUST00000029444 Eif5bQ05D44 1216 aaKnown RBP28.95■■■□□ 2.22
Trim33-201ENSMUST00000029444 Anp32aO35381 247 aa28.83■■■□□ 2.21
Trim33-201ENSMUST00000029444 Il27Q8K3I6 234 aa28.66■■■□□ 2.18
Trim33-201ENSMUST00000029444 DiexfQ8BTT6 772 aaKnown RBP28.63■■■□□ 2.17
Trim33-201ENSMUST00000029444 DaxxO35613 739 aa28.61■■■□□ 2.17
Trim33-201ENSMUST00000029444 ClspnQ80YR7 1315 aa28.57■■■□□ 2.16
Trim33-201ENSMUST00000029444 Zcchc6Q5BLK4 1491 aaKnown RBP28.55■■■□□ 2.16
Trim33-201ENSMUST00000029444 Ccdc9Q8VC31 543 aaKnown RBP28.5■■■□□ 2.15
Trim33-201ENSMUST00000029444 Ythdc1E9Q5K9 736 aaKnown RBP28.43■■■□□ 2.14
Trim33-201ENSMUST00000029444 Upf2A2AT37 1269 aaKnown RBP28.34■■■□□ 2.13
Trim33-201ENSMUST00000029444 Ap3b1Q9Z1T1 1105 aa28.33■■■□□ 2.13
Trim33-201ENSMUST00000029444 Nlrp6Q91WS2 869 aa28.3■■■□□ 2.12
Trim33-201ENSMUST00000029444 CatipB9EKE5 520 aa28.25■■■□□ 2.11
Trim33-201ENSMUST00000029444 Supt5hO55201 1082 aaKnown RBP28.25■■■□□ 2.11
Trim33-201ENSMUST00000029444 Ccer2J3QPU5 274 aa28.13■■■□□ 2.09
Trim33-201ENSMUST00000029444 Mier1Q5UAK0 511 aa28.09■■■□□ 2.09
Trim33-201ENSMUST00000029444 Hsp90aa1P07901 733 aaKnown RBP28.07■■■□□ 2.08
Trim33-201ENSMUST00000029444 Gm13697A2AK42 830 aa28.07■■■□□ 2.08
Trim33-201ENSMUST00000029444 Abcc9P70170 1546 aa27.98■■■□□ 2.07
Trim33-201ENSMUST00000029444 Hnrnpul2Q00PI9 745 aaKnown RBP27.91■■■□□ 2.06
Trim33-201ENSMUST00000029444 Npm1Q61937 292 aaKnown RBP27.9■■■□□ 2.06
Trim33-201ENSMUST00000029444 Aplp2Q06335 707 aa27.87■■■□□ 2.05
Trim33-201ENSMUST00000029444 Anks4bQ8K3X6 423 aa27.85■■■□□ 2.05
Trim33-201ENSMUST00000029444 Dcaf1Q80TR8 1506 aa27.79■■■□□ 2.04
Trim33-201ENSMUST00000029444 Polr3glQ8R0C0 218 aa27.77■■■□□ 2.04
Trim33-201ENSMUST00000029444 Trim44Q9QXA7 346 aa27.75■■■□□ 2.03
Trim33-201ENSMUST00000029444 Brd4Q9ESU6 1400 aaKnown RBP27.72■■■□□ 2.03
Trim33-201ENSMUST00000029444 Atp1b4Q99ME6 356 aa27.71■■■□□ 2.03
Trim33-201ENSMUST00000029444 Gm13695A2AK44 830 aa27.68■■■□□ 2.02
Trim33-201ENSMUST00000029444 Ppargc1bQ8VHJ7 1014 aa27.67■■■□□ 2.02
Trim33-201ENSMUST00000029444 Calr4Q3TQS0 420 aa27.65■■■□□ 2.02
Trim33-201ENSMUST00000029444 Adam1bQ8R534 806 aa27.64■■■□□ 2.02
Trim33-201ENSMUST00000029444 Erich6D3Z6S9 713 aa27.6■■■□□ 2.01
Trim33-201ENSMUST00000029444 Gm35339A0A140LHH9 1649 aa27.59■■■□□ 2.01
Trim33-201ENSMUST00000029444 Clstn2Q9ER65 966 aa27.53■■■□□ 2
Trim33-201ENSMUST00000029444 Cep164Q5DU05 1446 aa27.52■■■□□ 2
Trim33-201ENSMUST00000029444 Plekhg3Q4VAC9 1341 aa27.52■■■□□ 2
Trim33-201ENSMUST00000029444 Wdr43Q6ZQL4 677 aaKnown RBP27.52■■■□□ 2
Trim33-201ENSMUST00000029444 Zbtb7cQ8VCZ7 619 aa27.51■■□□□ 1.99
Trim33-201ENSMUST00000029444 Htatsf1Q8BGC0 757 aa27.49■■□□□ 1.99
Trim33-201ENSMUST00000029444 Lmod2Q3UHZ5 550 aa27.47■■□□□ 1.99
Trim33-201ENSMUST00000029444 Chic1Q8CBW7 227 aa27.47■■□□□ 1.99
Trim33-201ENSMUST00000029444 Clip1Q922J3 1391 aa27.46■■□□□ 1.99
Trim33-201ENSMUST00000029444 DekQ7TNV0 380 aaKnown RBP27.45■■□□□ 1.98
Trim33-201ENSMUST00000029444 Ppp4r2Q0VGB7 417 aa27.43■■□□□ 1.98
Trim33-201ENSMUST00000029444 ArxO35085 564 aa27.39■■□□□ 1.98
Trim33-201ENSMUST00000029444 Chmp4bQ9D8B3 224 aaKnown RBP27.35■■□□□ 1.97
Trim33-201ENSMUST00000029444 Lmod3E9QA62 571 aa27.33■■□□□ 1.97
Trim33-201ENSMUST00000029444 Fgd1P52734 960 aa27.32■■□□□ 1.96
Trim33-201ENSMUST00000029444 Zfp777B9EKF4 885 aa27.29■■□□□ 1.96
Trim33-201ENSMUST00000029444 Znf326O88291 580 aa27.28■■□□□ 1.96
Trim33-201ENSMUST00000029444 Hsp90ab1P11499 724 aaKnown RBP27.22■■□□□ 1.95
Trim33-201ENSMUST00000029444 Rb1cc1Q9ESK9 1588 aa27.22■■□□□ 1.95
Trim33-201ENSMUST00000029444 PtmaP26350 111 aa27.2■■□□□ 1.94
Trim33-201ENSMUST00000029444 Csrnp3P59055 597 aa27.15■■□□□ 1.94
Trim33-201ENSMUST00000029444 Zbtb4Q5F293 982 aa27.14■■□□□ 1.94
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms