RNA–Protein interactions for RNA: ENSMUST00000023759.4

Smarcd1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcd1, Length 3,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1-201ENSMUST00000023759 NischQ80TM9 1593 aa28.63■■■□□ 2.17
Smarcd1-201ENSMUST00000023759 Rhox8Q6VSS7 320 aa27.87■■■□□ 2.05
Smarcd1-201ENSMUST00000023759 Abcc9P70170 1546 aa27.7■■■□□ 2.02
Smarcd1-201ENSMUST00000023759 Gm35339A0A140LHH9 1649 aa27.67■■■□□ 2.02
Smarcd1-201ENSMUST00000023759 Abcc8B2RUS7 1588 aa27.04■■□□□ 1.92
Smarcd1-201ENSMUST00000023759 Rtl1Q7M732 1744 aa26.36■■□□□ 1.81
Smarcd1-201ENSMUST00000023759 Ehmt2Q9Z148 1263 aaKnown RBP26.34■■□□□ 1.81
Smarcd1-201ENSMUST00000023759 Ccdc180J3QNE4 1664 aa26.1■■□□□ 1.77
Smarcd1-201ENSMUST00000023759 Ccdc136Q3TVA9 1136 aa25.88■■□□□ 1.73
Smarcd1-201ENSMUST00000023759 Rpgrip1Q9EPQ2 1331 aa25.64■■□□□ 1.7
Smarcd1-201ENSMUST00000023759 Zcchc6Q5BLK4 1491 aaKnown RBP25.63■■□□□ 1.69
Smarcd1-201ENSMUST00000023759 Acin1Q9JIX8 1338 aaKnown RBP25.51■■□□□ 1.67
Smarcd1-201ENSMUST00000023759 Trim41Q5NCC3 630 aa25.15■■□□□ 1.62
Smarcd1-201ENSMUST00000023759 ScribQ80U72 1612 aa25.14■■□□□ 1.61
Smarcd1-201ENSMUST00000023759 HrcG5E8J6 738 aa25.13■■□□□ 1.61
Smarcd1-201ENSMUST00000023759 Rb1cc1Q9ESK9 1588 aa25.12■■□□□ 1.61
Smarcd1-201ENSMUST00000023759 Pcgf6Q99NA9 353 aa25■■□□□ 1.59
Smarcd1-201ENSMUST00000023759 Dcaf1Q80TR8 1506 aa25■■□□□ 1.59
Smarcd1-201ENSMUST00000023759 Gab3Q8BSM5 595 aa24.77■■□□□ 1.56
Smarcd1-201ENSMUST00000023759 Kdm5dQ62240 1548 aa24.75■■□□□ 1.55
Smarcd1-201ENSMUST00000023759 Baz1aO88379 1555 aa24.73■■□□□ 1.55
Smarcd1-201ENSMUST00000023759 Supt5hO55201 1082 aaKnown RBP24.66■■□□□ 1.54
Smarcd1-201ENSMUST00000023759 Cngb1E1AZ71 1325 aa24.62■■□□□ 1.53
Smarcd1-201ENSMUST00000023759 Zeb1Q64318 1117 aa24.5■■□□□ 1.51
Smarcd1-201ENSMUST00000023759 Chic1Q8CBW7 227 aa24.44■■□□□ 1.5
Smarcd1-201ENSMUST00000023759 NacadQ5SWP3 1504 aa24.39■■□□□ 1.5
Smarcd1-201ENSMUST00000023759 Cep164Q5DU05 1446 aa24.21■■□□□ 1.47
Smarcd1-201ENSMUST00000023759 Smarca2Q6DIC0 1577 aa24.2■■□□□ 1.46
Smarcd1-201ENSMUST00000023759 Neurod1Q60867 357 aa24.16■■□□□ 1.46
Smarcd1-201ENSMUST00000023759 Rsf1E9PWW9 1441 aaKnown RBP24.07■■□□□ 1.44
Smarcd1-201ENSMUST00000023759 Mier1Q5UAK0 511 aa24.07■■□□□ 1.44
Smarcd1-201ENSMUST00000023759 Esf1Q3V1V3 845 aaKnown RBP24■■□□□ 1.43
Smarcd1-201ENSMUST00000023759 Crybg2B7ZCC2 1516 aa23.99■■□□□ 1.43
Smarcd1-201ENSMUST00000023759 Ppargc1bQ8VHJ7 1014 aa23.93■■□□□ 1.42
Smarcd1-201ENSMUST00000023759 Ccdc88bQ4QRL3 1481 aa23.89■■□□□ 1.41
Smarcd1-201ENSMUST00000023759 Sycp2Q9CUU3 1500 aa23.88■■□□□ 1.41
Smarcd1-201ENSMUST00000023759 UbtfP25976 765 aaKnown RBP23.88■■□□□ 1.41
Smarcd1-201ENSMUST00000023759 Sall2Q9QX96 1004 aa23.88■■□□□ 1.41
Smarcd1-201ENSMUST00000023759 Cecr2E9Q2Z1 1453 aa23.8■■□□□ 1.4
Smarcd1-201ENSMUST00000023759 Wdr66E9Q743 1299 aa23.75■■□□□ 1.39
Smarcd1-201ENSMUST00000023759 NefmP08553 848 aa23.72■■□□□ 1.39
Smarcd1-201ENSMUST00000023759 Myt1lP97500 1187 aa23.72■■□□□ 1.39
Smarcd1-201ENSMUST00000023759 Brd4Q9ESU6 1400 aaKnown RBP23.69■■□□□ 1.38
Smarcd1-201ENSMUST00000023759 Las1lA2BE28 776 aaKnown RBP23.68■■□□□ 1.38
Smarcd1-201ENSMUST00000023759 Golga3P55937 1487 aa23.58■■□□□ 1.37
Smarcd1-201ENSMUST00000023759 1700123L14RikQ3V2K7 440 aa23.58■■□□□ 1.37
Smarcd1-201ENSMUST00000023759 Aebp2Q9Z248 504 aaKnown RBP23.57■■□□□ 1.36
Smarcd1-201ENSMUST00000023759 Synj1Q8CHC4 1574 aa23.57■■□□□ 1.36
Smarcd1-201ENSMUST00000023759 Csrnp3P59055 597 aa23.51■■□□□ 1.35
Smarcd1-201ENSMUST00000023759 BicraF8VPZ9 1578 aa23.4■■□□□ 1.34
Smarcd1-201ENSMUST00000023759 CftrP26361 1476 aa23.34■■□□□ 1.33
Smarcd1-201ENSMUST00000023759 Npm2Q80W85 207 aa23.34■■□□□ 1.33
Smarcd1-201ENSMUST00000023759 Plekhg3Q4VAC9 1341 aa23.3■■□□□ 1.32
Smarcd1-201ENSMUST00000023759 Gm38655A0A286YDK6 273 aa23.29■■□□□ 1.32
Smarcd1-201ENSMUST00000023759 CenpbP27790 599 aa23.24■■□□□ 1.31
Smarcd1-201ENSMUST00000023759 Top2bQ64511 1612 aa23.17■■□□□ 1.3
Smarcd1-201ENSMUST00000023759 Nop58Q6DFW4 536 aaKnown RBP23.16■■□□□ 1.3
Smarcd1-201ENSMUST00000023759 Cc2d2aQ8CFW7 1633 aa23.14■■□□□ 1.29
Smarcd1-201ENSMUST00000023759 Anks4bQ8K3X6 423 aa23.13■■□□□ 1.29
Smarcd1-201ENSMUST00000023759 Cdk11bP24788 784 aaKnown RBP23.13■■□□□ 1.29
Smarcd1-201ENSMUST00000023759 Ap3b1Q9Z1T1 1105 aa23.13■■□□□ 1.29
Smarcd1-201ENSMUST00000023759 Cttnbp2B9EJA2 1648 aa23.07■■□□□ 1.28
Smarcd1-201ENSMUST00000023759 Eid3Q3V124 375 aa23.06■■□□□ 1.28
Smarcd1-201ENSMUST00000023759 TonslQ6NZL6 1363 aa23.03■■□□□ 1.28
Smarcd1-201ENSMUST00000023759 ClspnQ80YR7 1315 aa23.02■■□□□ 1.27
Smarcd1-201ENSMUST00000023759 Il27Q8K3I6 234 aa23■■□□□ 1.27
Smarcd1-201ENSMUST00000023759 DiexfQ8BTT6 772 aaKnown RBP22.97■■□□□ 1.27
Smarcd1-201ENSMUST00000023759 Mapk8ip2Q9ERE9 830 aa22.97■■□□□ 1.27
Smarcd1-201ENSMUST00000023759 Rapgef2Q8CHG7 1496 aa22.94■■□□□ 1.26
Smarcd1-201ENSMUST00000023759 Smarca4Q3TKT4 1613 aaKnown RBP22.92■■□□□ 1.26
Smarcd1-201ENSMUST00000023759 Clip1Q922J3 1391 aa22.91■■□□□ 1.26
Smarcd1-201ENSMUST00000023759 Cep162Q6ZQ06 1403 aa22.9■■□□□ 1.26
Smarcd1-201ENSMUST00000023759 Fmn1Q05860 1466 aa22.84■■□□□ 1.25
Smarcd1-201ENSMUST00000023759 Top2aQ01320 1528 aaKnown RBP22.81■■□□□ 1.24
Smarcd1-201ENSMUST00000023759 Myt1Q8CFC2 1127 aa22.76■■□□□ 1.23
Smarcd1-201ENSMUST00000023759 Aplp2Q06335 707 aa22.69■■□□□ 1.22
Smarcd1-201ENSMUST00000023759 Bcl11aQ9QYE3 773 aa22.65■■□□□ 1.22
Smarcd1-201ENSMUST00000023759 Iqgap2Q3UQ44 1575 aa22.63■■□□□ 1.21
Smarcd1-201ENSMUST00000023759 SafbD3YXK2 937 aaKnown RBP22.59■■□□□ 1.21
Smarcd1-201ENSMUST00000023759 Fam50aQ9WV03 339 aaKnown RBP22.58■■□□□ 1.21
Smarcd1-201ENSMUST00000023759 Lmod2Q3UHZ5 550 aa22.57■■□□□ 1.2
Smarcd1-201ENSMUST00000023759 Hnrnpul2Q00PI9 745 aaKnown RBP22.52■■□□□ 1.2
Smarcd1-201ENSMUST00000023759 PtprkP35822 1457 aa22.45■■□□□ 1.18
Smarcd1-201ENSMUST00000023759 Ncapd3Q6ZQK0 1506 aa22.44■■□□□ 1.18
Smarcd1-201ENSMUST00000023759 Setd5Q5XJV7 1441 aa22.42■■□□□ 1.18
Smarcd1-201ENSMUST00000023759 Fam71e1A1L3C1 212 aa22.42■■□□□ 1.18
Smarcd1-201ENSMUST00000023759 Eif4g1Q6NZJ6 1600 aaKnown RBP22.41■■□□□ 1.18
Smarcd1-201ENSMUST00000023759 NclP09405 707 aaKnown RBP22.41■■□□□ 1.18
Smarcd1-201ENSMUST00000023759 Slc24a1Q91WD8 1130 aa22.38■■□□□ 1.17
Smarcd1-201ENSMUST00000023759 Atad2bE9Q166 1460 aaKnown RBP22.38■■□□□ 1.17
Smarcd1-201ENSMUST00000023759 Arhgap35Q91YM2 1499 aa22.36■■□□□ 1.17
Smarcd1-201ENSMUST00000023759 Arap1Q4LDD4 1452 aa22.33■■□□□ 1.17
Smarcd1-201ENSMUST00000023759 Eea1Q8BL66 1411 aa22.33■■□□□ 1.16
Smarcd1-201ENSMUST00000023759 PrkcshO08795 521 aa22.32■■□□□ 1.16
Smarcd1-201ENSMUST00000023759 BlmO88700 1416 aa22.31■■□□□ 1.16
Smarcd1-201ENSMUST00000023759 Ifnlr1Q8CGK5 535 aa22.31■■□□□ 1.16
Smarcd1-201ENSMUST00000023759 Ube2uB1AUC4 352 aa22.31■■□□□ 1.16
Smarcd1-201ENSMUST00000023759 TnnQ80Z71 1560 aa22.26■■□□□ 1.15
Smarcd1-201ENSMUST00000023759 Kif15Q6P9L6 1387 aa22.25■■□□□ 1.15
Smarcd1-201ENSMUST00000023759 Hspa5P20029 655 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 71.3 ms