RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Chic1Q8CBW7 227 aa21.95■■□□□ 1.1
Ldb3-202ENSMUST00000022328 NischQ80TM9 1593 aa21.53■■□□□ 1.04
Ldb3-202ENSMUST00000022328 Gm35339A0A140LHH9 1649 aa21.27■■□□□ 1
Ldb3-202ENSMUST00000022328 Abcc9P70170 1546 aa20.94■□□□□ 0.94
Ldb3-202ENSMUST00000022328 Mapk8ip2Q9ERE9 830 aa20.66■□□□□ 0.9
Ldb3-202ENSMUST00000022328 Abcc8B2RUS7 1588 aa20.5■□□□□ 0.87
Ldb3-202ENSMUST00000022328 Phf23Q8BSN5 401 aa20.16■□□□□ 0.82
Ldb3-202ENSMUST00000022328 Plppr3Q7TPB0 716 aa19.94■□□□□ 0.78
Ldb3-202ENSMUST00000022328 Rhox8Q6VSS7 320 aa19.75■□□□□ 0.75
Ldb3-202ENSMUST00000022328 Rtl1Q7M732 1744 aa19.53■□□□□ 0.72
Ldb3-202ENSMUST00000022328 Gab3Q8BSM5 595 aa19.32■□□□□ 0.68
Ldb3-202ENSMUST00000022328 Dcaf1Q80TR8 1506 aa19.17■□□□□ 0.66
Ldb3-202ENSMUST00000022328 Ccdc180J3QNE4 1664 aa19.14■□□□□ 0.65
Ldb3-202ENSMUST00000022328 ScribQ80U72 1612 aa19.12■□□□□ 0.65
Ldb3-202ENSMUST00000022328 Kcna4Q61423 654 aa19.09■□□□□ 0.65
Ldb3-202ENSMUST00000022328 Zcchc6Q5BLK4 1491 aaKnown RBP18.86■□□□□ 0.61
Ldb3-202ENSMUST00000022328 Rb1cc1Q9ESK9 1588 aa18.85■□□□□ 0.61
Ldb3-202ENSMUST00000022328 Kdm5dQ62240 1548 aa18.75■□□□□ 0.59
Ldb3-202ENSMUST00000022328 Senp3Q9EP97 568 aaKnown RBP18.69■□□□□ 0.58
Ldb3-202ENSMUST00000022328 Baz1aO88379 1555 aa18.66■□□□□ 0.58
Ldb3-202ENSMUST00000022328 NacadQ5SWP3 1504 aa18.64■□□□□ 0.57
Ldb3-202ENSMUST00000022328 Crybg2B7ZCC2 1516 aa18.4■□□□□ 0.54
Ldb3-202ENSMUST00000022328 Rpgrip1Q9EPQ2 1331 aa18.33■□□□□ 0.53
Ldb3-202ENSMUST00000022328 Ccdc136Q3TVA9 1136 aa18.32■□□□□ 0.52
Ldb3-202ENSMUST00000022328 HrcG5E8J6 738 aa18.28■□□□□ 0.52
Ldb3-202ENSMUST00000022328 Smarca2Q6DIC0 1577 aa18.24■□□□□ 0.51
Ldb3-202ENSMUST00000022328 Sycp2Q9CUU3 1500 aa18.24■□□□□ 0.51
Ldb3-202ENSMUST00000022328 Trim41Q5NCC3 630 aa18.04■□□□□ 0.48
Ldb3-202ENSMUST00000022328 BicraF8VPZ9 1578 aa17.82■□□□□ 0.44
Ldb3-202ENSMUST00000022328 Brd4Q9ESU6 1400 aaKnown RBP17.79■□□□□ 0.44
Ldb3-202ENSMUST00000022328 Cecr2E9Q2Z1 1453 aa17.77■□□□□ 0.44
Ldb3-202ENSMUST00000022328 Cep164Q5DU05 1446 aa17.75■□□□□ 0.43
Ldb3-202ENSMUST00000022328 Acin1Q9JIX8 1338 aaKnown RBP17.73■□□□□ 0.43
Ldb3-202ENSMUST00000022328 Ppargc1bQ8VHJ7 1014 aa17.62■□□□□ 0.41
Ldb3-202ENSMUST00000022328 Synj1Q8CHC4 1574 aa17.62■□□□□ 0.41
Ldb3-202ENSMUST00000022328 Golga3P55937 1487 aa17.57■□□□□ 0.4
Ldb3-202ENSMUST00000022328 CftrP26361 1476 aa17.55■□□□□ 0.4
Ldb3-202ENSMUST00000022328 Rsf1E9PWW9 1441 aaKnown RBP17.54■□□□□ 0.4
Ldb3-202ENSMUST00000022328 Cngb1E1AZ71 1325 aa17.53■□□□□ 0.4
Ldb3-202ENSMUST00000022328 Ehmt2Q9Z148 1263 aaKnown RBP17.52■□□□□ 0.39
Ldb3-202ENSMUST00000022328 Cttnbp2B9EJA2 1648 aa17.45■□□□□ 0.38
Ldb3-202ENSMUST00000022328 Ccdc88bQ4QRL3 1481 aa17.43■□□□□ 0.38
Ldb3-202ENSMUST00000022328 Smarca4Q3TKT4 1613 aaKnown RBP17.42■□□□□ 0.38
Ldb3-202ENSMUST00000022328 Pcgf6Q99NA9 353 aa17.41■□□□□ 0.38
Ldb3-202ENSMUST00000022328 Top2bQ64511 1612 aa17.39■□□□□ 0.37
Ldb3-202ENSMUST00000022328 Esf1Q3V1V3 845 aaKnown RBP17.33■□□□□ 0.37
Ldb3-202ENSMUST00000022328 Iqgap2Q3UQ44 1575 aa17.18■□□□□ 0.34
Ldb3-202ENSMUST00000022328 Cc2d2aQ8CFW7 1633 aa17.16■□□□□ 0.34
Ldb3-202ENSMUST00000022328 Atad2bE9Q166 1460 aaKnown RBP17.14■□□□□ 0.33
Ldb3-202ENSMUST00000022328 Fmn1Q05860 1466 aa17.13■□□□□ 0.33
Ldb3-202ENSMUST00000022328 Ube2uB1AUC4 352 aa17.07■□□□□ 0.32
Ldb3-202ENSMUST00000022328 Pds5bQ4VA53 1446 aaKnown RBP17.06■□□□□ 0.32
Ldb3-202ENSMUST00000022328 Top2aQ01320 1528 aaKnown RBP17.04■□□□□ 0.32
Ldb3-202ENSMUST00000022328 Rapgef2Q8CHG7 1496 aa17.01■□□□□ 0.31
Ldb3-202ENSMUST00000022328 Dmrt2Q8BG36 561 aa16.97■□□□□ 0.31
Ldb3-202ENSMUST00000022328 TnnQ80Z71 1560 aa16.89■□□□□ 0.29
Ldb3-202ENSMUST00000022328 Supt5hO55201 1082 aaKnown RBP16.88■□□□□ 0.29
Ldb3-202ENSMUST00000022328 Frmpd1A2AKB4 1549 aa16.86■□□□□ 0.29
Ldb3-202ENSMUST00000022328 Wdr62Q3U3T8 1523 aa16.86■□□□□ 0.29
Ldb3-202ENSMUST00000022328 Cep162Q6ZQ06 1403 aa16.86■□□□□ 0.29
Ldb3-202ENSMUST00000022328 Neurod1Q60867 357 aa16.78■□□□□ 0.28
Ldb3-202ENSMUST00000022328 Mier1Q5UAK0 511 aa16.76■□□□□ 0.27
Ldb3-202ENSMUST00000022328 Eif4g1Q6NZJ6 1600 aaKnown RBP16.75■□□□□ 0.27
Ldb3-202ENSMUST00000022328 Lamc3Q9R0B6 1581 aa16.75■□□□□ 0.27
Ldb3-202ENSMUST00000022328 NefmP08553 848 aa16.73■□□□□ 0.27
Ldb3-202ENSMUST00000022328 Ercc6F8VPZ5 1481 aa16.73■□□□□ 0.27
Ldb3-202ENSMUST00000022328 Npm2Q80W85 207 aa16.69■□□□□ 0.26
Ldb3-202ENSMUST00000022328 Myt1lP97500 1187 aa16.65■□□□□ 0.26
Ldb3-202ENSMUST00000022328 Unc13aQ4KUS2 1712 aa16.64■□□□□ 0.25
Ldb3-202ENSMUST00000022328 Las1lA2BE28 776 aaKnown RBP16.63■□□□□ 0.25
Ldb3-202ENSMUST00000022328 Kif15Q6P9L6 1387 aa16.63■□□□□ 0.25
Ldb3-202ENSMUST00000022328 NrkQ9R0G8 1455 aa16.63■□□□□ 0.25
Ldb3-202ENSMUST00000022328 Arhgap35Q91YM2 1499 aa16.6■□□□□ 0.25
Ldb3-202ENSMUST00000022328 PtprkP35822 1457 aa16.59■□□□□ 0.25
Ldb3-202ENSMUST00000022328 Camsap1A2AHC3 1581 aa16.58■□□□□ 0.24
Ldb3-202ENSMUST00000022328 UbtfP25976 765 aaKnown RBP16.57■□□□□ 0.24
Ldb3-202ENSMUST00000022328 Clip1Q922J3 1391 aa16.56■□□□□ 0.24
Ldb3-202ENSMUST00000022328 Shroom4Q1W617 1475 aa16.55■□□□□ 0.24
Ldb3-202ENSMUST00000022328 Slc4a1apE9PX68 744 aa16.5■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Ccdc18Q640L5 1455 aa16.5■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Thoc2B1AZI6 1594 aaKnown RBP16.5■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Phldb1Q6PDH0 1371 aaKnown RBP16.49■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Map3k1P53349 1493 aa16.49■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Il27Q8K3I6 234 aa16.48■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Grin2bQ01097 1482 aa16.48■□□□□ 0.23
Ldb3-202ENSMUST00000022328 Zeb1Q64318 1117 aa16.45■□□□□ 0.22
Ldb3-202ENSMUST00000022328 Eea1Q8BL66 1411 aa16.44■□□□□ 0.22
Ldb3-202ENSMUST00000022328 Arap1Q4LDD4 1452 aa16.4■□□□□ 0.22
Ldb3-202ENSMUST00000022328 Plekhg3Q4VAC9 1341 aa16.39■□□□□ 0.21
Ldb3-202ENSMUST00000022328 1700123L14RikQ3V2K7 440 aa16.38■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Mroh2bQ7M6Y6 1581 aa16.38■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Cux2P70298 1426 aa16.37■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Trap1aP19473 224 aa16.36■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Arhgef5E9Q7D5 1581 aa16.36■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Ncapd3Q6ZQK0 1506 aa16.35■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Fam135aQ6NS59 1506 aa16.35■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Anks4bQ8K3X6 423 aa16.35■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Setd5Q5XJV7 1441 aa16.34■□□□□ 0.21
Ldb3-202ENSMUST00000022328 AqrQ8CFQ3 1481 aaKnown RBP16.33■□□□□ 0.21
Ldb3-202ENSMUST00000022328 Ubl4bQ9CQ84 188 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 216.9 ms