RNA–Protein interactions for RNA: ENSMUST00000021036.12

Rffl-201, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

TSL 1 (best) BASIC

Gene Rffl, Length 1,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-201ENSMUST00000021036 Gm35339A0A140LHH9 1649 aa23.31■■□□□ 1.32
Rffl-201ENSMUST00000021036 NischQ80TM9 1593 aa22.92■■□□□ 1.26
Rffl-201ENSMUST00000021036 Abcc9P70170 1546 aa22.19■■□□□ 1.14
Rffl-201ENSMUST00000021036 Abcc8B2RUS7 1588 aa22.17■■□□□ 1.14
Rffl-201ENSMUST00000021036 ScribQ80U72 1612 aa21.49■■□□□ 1.03
Rffl-201ENSMUST00000021036 Kdm5dQ62240 1548 aa20.72■□□□□ 0.91
Rffl-201ENSMUST00000021036 NacadQ5SWP3 1504 aa20.69■□□□□ 0.9
Rffl-201ENSMUST00000021036 Dcaf1Q80TR8 1506 aa20.37■□□□□ 0.85
Rffl-201ENSMUST00000021036 Sycp2Q9CUU3 1500 aa20.31■□□□□ 0.84
Rffl-201ENSMUST00000021036 BicraF8VPZ9 1578 aa20.1■□□□□ 0.81
Rffl-201ENSMUST00000021036 Rb1cc1Q9ESK9 1588 aa20■□□□□ 0.79
Rffl-201ENSMUST00000021036 Ccdc180J3QNE4 1664 aa19.71■□□□□ 0.75
Rffl-201ENSMUST00000021036 Baz1aO88379 1555 aa19.69■□□□□ 0.74
Rffl-201ENSMUST00000021036 Rhox8Q6VSS7 320 aa19.67■□□□□ 0.74
Rffl-201ENSMUST00000021036 Dnajc5bQ9CQ94 199 aa19.57■□□□□ 0.72
Rffl-201ENSMUST00000021036 Crybg2B7ZCC2 1516 aa19.55■□□□□ 0.72
Rffl-201ENSMUST00000021036 Pds5bQ4VA53 1446 aaKnown RBP19.44■□□□□ 0.7
Rffl-201ENSMUST00000021036 Thoc2B1AZI6 1594 aaKnown RBP19.4■□□□□ 0.7
Rffl-201ENSMUST00000021036 Zcchc6Q5BLK4 1491 aaKnown RBP19.39■□□□□ 0.69
Rffl-201ENSMUST00000021036 Atad2bE9Q166 1460 aaKnown RBP19.26■□□□□ 0.67
Rffl-201ENSMUST00000021036 Smarca4Q3TKT4 1613 aaKnown RBP19.14■□□□□ 0.65
Rffl-201ENSMUST00000021036 Smarca2Q6DIC0 1577 aa19.12■□□□□ 0.65
Rffl-201ENSMUST00000021036 Cc2d2aQ8CFW7 1633 aa19.08■□□□□ 0.64
Rffl-201ENSMUST00000021036 Cecr2E9Q2Z1 1453 aa19.08■□□□□ 0.64
Rffl-201ENSMUST00000021036 Ercc6F8VPZ5 1481 aa19.05■□□□□ 0.64
Rffl-201ENSMUST00000021036 Iqgap2Q3UQ44 1575 aa19.05■□□□□ 0.64
Rffl-201ENSMUST00000021036 Fam135aQ6NS59 1506 aa18.92■□□□□ 0.62
Rffl-201ENSMUST00000021036 Wdr62Q3U3T8 1523 aa18.9■□□□□ 0.62
Rffl-201ENSMUST00000021036 Rtl1Q7M732 1744 aa18.88■□□□□ 0.61
Rffl-201ENSMUST00000021036 Frmpd1A2AKB4 1549 aa18.85■□□□□ 0.61
Rffl-201ENSMUST00000021036 Unc13aQ4KUS2 1712 aa18.74■□□□□ 0.59
Rffl-201ENSMUST00000021036 Phldb1Q6PDH0 1371 aaKnown RBP18.69■□□□□ 0.58
Rffl-201ENSMUST00000021036 Cttnbp2B9EJA2 1648 aa18.63■□□□□ 0.57
Rffl-201ENSMUST00000021036 Synj1Q8CHC4 1574 aa18.61■□□□□ 0.57
Rffl-201ENSMUST00000021036 CftrP26361 1476 aa18.6■□□□□ 0.57
Rffl-201ENSMUST00000021036 Baz1bQ9Z277 1479 aa18.6■□□□□ 0.57
Rffl-201ENSMUST00000021036 Ubl4bQ9CQ84 188 aa18.5■□□□□ 0.55
Rffl-201ENSMUST00000021036 Brd4Q9ESU6 1400 aaKnown RBP18.5■□□□□ 0.55
Rffl-201ENSMUST00000021036 Mrc2Q64449 1479 aa18.45■□□□□ 0.54
Rffl-201ENSMUST00000021036 Ccdc136Q3TVA9 1136 aa18.43■□□□□ 0.54
Rffl-201ENSMUST00000021036 Esf1Q3V1V3 845 aaKnown RBP18.2■□□□□ 0.5
Rffl-201ENSMUST00000021036 Lrriq1Q0P5X1 1673 aa18.13■□□□□ 0.49
Rffl-201ENSMUST00000021036 Rsf1E9PWW9 1441 aaKnown RBP18.13■□□□□ 0.49
Rffl-201ENSMUST00000021036 Cux2P70298 1426 aa18.12■□□□□ 0.49
Rffl-201ENSMUST00000021036 Kif15Q6P9L6 1387 aa18.11■□□□□ 0.49
Rffl-201ENSMUST00000021036 Kif21aQ9QXL2 1672 aa18.11■□□□□ 0.49
Rffl-201ENSMUST00000021036 Lamc3Q9R0B6 1581 aa18.09■□□□□ 0.49
Rffl-201ENSMUST00000021036 Trim41Q5NCC3 630 aa18.07■□□□□ 0.48
Rffl-201ENSMUST00000021036 Top2bQ64511 1612 aa17.93■□□□□ 0.46
Rffl-201ENSMUST00000021036 TnnQ80Z71 1560 aa17.91■□□□□ 0.46
Rffl-201ENSMUST00000021036 Npm1Q61937 292 aaKnown RBP17.86■□□□□ 0.45
Rffl-201ENSMUST00000021036 Golga3P55937 1487 aa17.85■□□□□ 0.45
Rffl-201ENSMUST00000021036 Eif4g3Q80XI3 1579 aaKnown RBP17.84■□□□□ 0.45
Rffl-201ENSMUST00000021036 Cep164Q5DU05 1446 aa17.84■□□□□ 0.45
Rffl-201ENSMUST00000021036 Camsap1A2AHC3 1581 aa17.78■□□□□ 0.44
Rffl-201ENSMUST00000021036 Ccdc18Q640L5 1455 aa17.77■□□□□ 0.43
Rffl-201ENSMUST00000021036 Urb2E9Q7L1 1524 aaKnown RBP17.75■□□□□ 0.43
Rffl-201ENSMUST00000021036 Cngb1E1AZ71 1325 aa17.75■□□□□ 0.43
Rffl-201ENSMUST00000021036 Dhx29Q6PGC1 1365 aaKnown RBP17.74■□□□□ 0.43
Rffl-201ENSMUST00000021036 Il27Q8K3I6 234 aa17.72■□□□□ 0.43
Rffl-201ENSMUST00000021036 Crocc2F6XLV1 1638 aa17.72■□□□□ 0.43
Rffl-201ENSMUST00000021036 Plb1Q3TTY0 1478 aa17.7■□□□□ 0.42
Rffl-201ENSMUST00000021036 Dnajc5P60904 198 aa17.69■□□□□ 0.42
Rffl-201ENSMUST00000021036 LrpprcQ6PB66 1392 aaKnown RBP17.68■□□□□ 0.42
Rffl-201ENSMUST00000021036 Fmn1Q05860 1466 aa17.67■□□□□ 0.42
Rffl-201ENSMUST00000021036 PogzQ8BZH4 1409 aaKnown RBP17.6■□□□□ 0.41
Rffl-201ENSMUST00000021036 Shroom2A2ALU4 1481 aa17.58■□□□□ 0.41
Rffl-201ENSMUST00000021036 Rusc2Q80U22 1514 aa17.53■□□□□ 0.4
Rffl-201ENSMUST00000021036 Ift140E9PY46 1464 aa17.53■□□□□ 0.4
Rffl-201ENSMUST00000021036 Duox2A2AQ99 1517 aa17.52■□□□□ 0.4
Rffl-201ENSMUST00000021036 Setd1bQ8CFT2 1985 aa17.51■□□□□ 0.39
Rffl-201ENSMUST00000021036 Grin2bQ01097 1482 aa17.5■□□□□ 0.39
Rffl-201ENSMUST00000021036 Samd9lQ69Z37 1561 aa17.47■□□□□ 0.39
Rffl-201ENSMUST00000021036 Disp1Q3TDN0 1521 aa17.41■□□□□ 0.38
Rffl-201ENSMUST00000021036 Ccdc88bQ4QRL3 1481 aa17.4■□□□□ 0.38
Rffl-201ENSMUST00000021036 Pbrm1Q8BSQ9 1634 aaKnown RBP17.4■□□□□ 0.38
Rffl-201ENSMUST00000021036 Col17a1Q07563 1470 aa17.36■□□□□ 0.37
Rffl-201ENSMUST00000021036 Top2aQ01320 1528 aaKnown RBP17.36■□□□□ 0.37
Rffl-201ENSMUST00000021036 Nup160Q9Z0W3 1402 aaKnown RBP17.34■□□□□ 0.37
Rffl-201ENSMUST00000021036 Efcab5A0JP43 1406 aa17.33■□□□□ 0.37
Rffl-201ENSMUST00000021036 Pabpn1Q8CCS6 302 aaKnown RBP17.33■□□□□ 0.37
Rffl-201ENSMUST00000021036 Rad54l2Q99NG0 1466 aa17.3■□□□□ 0.36
Rffl-201ENSMUST00000021036 Cc2d2bA0A286YDU8 1405 aa17.27■□□□□ 0.36
Rffl-201ENSMUST00000021036 Pelp1Q9DBD5 1123 aaKnown RBP17.27■□□□□ 0.35
Rffl-201ENSMUST00000021036 NrkQ9R0G8 1455 aa17.26■□□□□ 0.35
Rffl-201ENSMUST00000021036 Magi3Q9EQJ9 1476 aa17.26■□□□□ 0.35
Rffl-201ENSMUST00000021036 Grin2aP35436 1464 aa17.25■□□□□ 0.35
Rffl-201ENSMUST00000021036 Chic1Q8CBW7 227 aa17.24■□□□□ 0.35
Rffl-201ENSMUST00000021036 PtprkP35822 1457 aa17.22■□□□□ 0.35
Rffl-201ENSMUST00000021036 Shroom4Q1W617 1475 aa17.21■□□□□ 0.34
Rffl-201ENSMUST00000021036 AqrQ8CFQ3 1481 aaKnown RBP17.2■□□□□ 0.34
Rffl-201ENSMUST00000021036 Zcchc11B2RX14 1644 aaKnown RBP17.2■□□□□ 0.34
Rffl-201ENSMUST00000021036 Gpatch8A2A6A1 1505 aa17.17■□□□□ 0.34
Rffl-201ENSMUST00000021036 SynmQ70IV5 1561 aa17.16■□□□□ 0.34
Rffl-201ENSMUST00000021036 Pla2r1Q62028 1487 aa17.15■□□□□ 0.34
Rffl-201ENSMUST00000021036 Fgd6Q69ZL1 1399 aa17.09■□□□□ 0.33
Rffl-201ENSMUST00000021036 Cep170Q6A065 1588 aa17.05■□□□□ 0.32
Rffl-201ENSMUST00000021036 Abca16E9PWJ7 1678 aa17.04■□□□□ 0.32
Rffl-201ENSMUST00000021036 Chd1P40201 1711 aa17.03■□□□□ 0.32
Rffl-201ENSMUST00000021036 Gapvd1Q6PAR5 1458 aa17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 2420.1 ms