RNA–Protein interactions for RNA: ENSMUST00000020454.10

Hmg20b-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmg20b, Length 1,621 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20b-201ENSMUST00000020454 Gm35339A0A140LHH9 1649 aa37.37■■■■□ 3.57
Hmg20b-201ENSMUST00000020454 NischQ80TM9 1593 aa37.33■■■■□ 3.57
Hmg20b-201ENSMUST00000020454 Abcc9P70170 1546 aa36.22■■■■□ 3.39
Hmg20b-201ENSMUST00000020454 Abcc8B2RUS7 1588 aa35.79■■■■□ 3.32
Hmg20b-201ENSMUST00000020454 ScribQ80U72 1612 aa33.88■■■■□ 3.01
Hmg20b-201ENSMUST00000020454 Dcaf1Q80TR8 1506 aa33.32■■■□□ 2.92
Hmg20b-201ENSMUST00000020454 Rhox8Q6VSS7 320 aa33.24■■■□□ 2.91
Hmg20b-201ENSMUST00000020454 NacadQ5SWP3 1504 aa33.04■■■□□ 2.88
Hmg20b-201ENSMUST00000020454 Kdm5dQ62240 1548 aa33.04■■■□□ 2.88
Hmg20b-201ENSMUST00000020454 Rb1cc1Q9ESK9 1588 aa32.6■■■□□ 2.81
Hmg20b-201ENSMUST00000020454 Ccdc180J3QNE4 1664 aa32.4■■■□□ 2.78
Hmg20b-201ENSMUST00000020454 Sycp2Q9CUU3 1500 aa32.32■■■□□ 2.76
Hmg20b-201ENSMUST00000020454 Baz1aO88379 1555 aa32.24■■■□□ 2.75
Hmg20b-201ENSMUST00000020454 Crybg2B7ZCC2 1516 aa32.03■■■□□ 2.72
Hmg20b-201ENSMUST00000020454 Rtl1Q7M732 1744 aa31.95■■■□□ 2.71
Hmg20b-201ENSMUST00000020454 BicraF8VPZ9 1578 aa31.66■■■□□ 2.66
Hmg20b-201ENSMUST00000020454 Zcchc6Q5BLK4 1491 aaKnown RBP31.59■■■□□ 2.65
Hmg20b-201ENSMUST00000020454 Smarca2Q6DIC0 1577 aa31.38■■■□□ 2.61
Hmg20b-201ENSMUST00000020454 Ccdc136Q3TVA9 1136 aa30.92■■■□□ 2.54
Hmg20b-201ENSMUST00000020454 Cecr2E9Q2Z1 1453 aa30.84■■■□□ 2.53
Hmg20b-201ENSMUST00000020454 Smarca4Q3TKT4 1613 aaKnown RBP30.68■■■□□ 2.5
Hmg20b-201ENSMUST00000020454 Pds5bQ4VA53 1446 aaKnown RBP30.67■■■□□ 2.5
Hmg20b-201ENSMUST00000020454 Brd4Q9ESU6 1400 aaKnown RBP30.63■■■□□ 2.49
Hmg20b-201ENSMUST00000020454 Trim41Q5NCC3 630 aa30.61■■■□□ 2.49
Hmg20b-201ENSMUST00000020454 Atad2bE9Q166 1460 aaKnown RBP30.57■■■□□ 2.48
Hmg20b-201ENSMUST00000020454 Synj1Q8CHC4 1574 aa30.37■■■□□ 2.45
Hmg20b-201ENSMUST00000020454 CftrP26361 1476 aa30.37■■■□□ 2.45
Hmg20b-201ENSMUST00000020454 Iqgap2Q3UQ44 1575 aa30.35■■■□□ 2.45
Hmg20b-201ENSMUST00000020454 Cttnbp2B9EJA2 1648 aa30.32■■■□□ 2.44
Hmg20b-201ENSMUST00000020454 Ercc6F8VPZ5 1481 aa30.05■■■□□ 2.4
Hmg20b-201ENSMUST00000020454 Thoc2B1AZI6 1594 aaKnown RBP29.97■■■□□ 2.39
Hmg20b-201ENSMUST00000020454 Esf1Q3V1V3 845 aaKnown RBP29.95■■■□□ 2.38
Hmg20b-201ENSMUST00000020454 Wdr62Q3U3T8 1523 aa29.94■■■□□ 2.38
Hmg20b-201ENSMUST00000020454 Frmpd1A2AKB4 1549 aa29.9■■■□□ 2.38
Hmg20b-201ENSMUST00000020454 Golga3P55937 1487 aa29.87■■■□□ 2.37
Hmg20b-201ENSMUST00000020454 HrcG5E8J6 738 aa29.78■■■□□ 2.36
Hmg20b-201ENSMUST00000020454 Cngb1E1AZ71 1325 aa29.72■■■□□ 2.35
Hmg20b-201ENSMUST00000020454 Top2bQ64511 1612 aa29.68■■■□□ 2.34
Hmg20b-201ENSMUST00000020454 Phldb1Q6PDH0 1371 aaKnown RBP29.56■■■□□ 2.32
Hmg20b-201ENSMUST00000020454 Cc2d2aQ8CFW7 1633 aa29.54■■■□□ 2.32
Hmg20b-201ENSMUST00000020454 Fam135aQ6NS59 1506 aa29.51■■■□□ 2.32
Hmg20b-201ENSMUST00000020454 Unc13aQ4KUS2 1712 aa29.48■■■□□ 2.31
Hmg20b-201ENSMUST00000020454 Rsf1E9PWW9 1441 aaKnown RBP29.35■■■□□ 2.29
Hmg20b-201ENSMUST00000020454 Fmn1Q05860 1466 aa29.35■■■□□ 2.29
Hmg20b-201ENSMUST00000020454 Dnajc5bQ9CQ94 199 aa29.3■■■□□ 2.28
Hmg20b-201ENSMUST00000020454 Baz1bQ9Z277 1479 aa29.29■■■□□ 2.28
Hmg20b-201ENSMUST00000020454 Lamc3Q9R0B6 1581 aa29.27■■■□□ 2.28
Hmg20b-201ENSMUST00000020454 Ccdc88bQ4QRL3 1481 aa29.26■■■□□ 2.27
Hmg20b-201ENSMUST00000020454 Cep164Q5DU05 1446 aa29.25■■■□□ 2.27
Hmg20b-201ENSMUST00000020454 Ubl4bQ9CQ84 188 aa29.24■■■□□ 2.27
Hmg20b-201ENSMUST00000020454 TnnQ80Z71 1560 aa29.22■■■□□ 2.27
Hmg20b-201ENSMUST00000020454 Kif15Q6P9L6 1387 aa29.18■■■□□ 2.26
Hmg20b-201ENSMUST00000020454 Chic1Q8CBW7 227 aa29.18■■■□□ 2.26
Hmg20b-201ENSMUST00000020454 Top2aQ01320 1528 aaKnown RBP28.95■■■□□ 2.22
Hmg20b-201ENSMUST00000020454 Cux2P70298 1426 aa28.94■■■□□ 2.22
Hmg20b-201ENSMUST00000020454 Ccdc18Q640L5 1455 aa28.87■■■□□ 2.21
Hmg20b-201ENSMUST00000020454 Mrc2Q64449 1479 aa28.85■■■□□ 2.21
Hmg20b-201ENSMUST00000020454 Camsap1A2AHC3 1581 aa28.84■■■□□ 2.21
Hmg20b-201ENSMUST00000020454 Npm1Q61937 292 aaKnown RBP28.76■■■□□ 2.2
Hmg20b-201ENSMUST00000020454 Il27Q8K3I6 234 aa28.71■■■□□ 2.19
Hmg20b-201ENSMUST00000020454 Gab3Q8BSM5 595 aa28.66■■■□□ 2.18
Hmg20b-201ENSMUST00000020454 Grin2bQ01097 1482 aa28.55■■■□□ 2.16
Hmg20b-201ENSMUST00000020454 LrpprcQ6PB66 1392 aaKnown RBP28.55■■■□□ 2.16
Hmg20b-201ENSMUST00000020454 NrkQ9R0G8 1455 aa28.53■■■□□ 2.16
Hmg20b-201ENSMUST00000020454 Rapgef2Q8CHG7 1496 aa28.5■■■□□ 2.15
Hmg20b-201ENSMUST00000020454 Kif21aQ9QXL2 1672 aa28.45■■■□□ 2.14
Hmg20b-201ENSMUST00000020454 PogzQ8BZH4 1409 aaKnown RBP28.45■■■□□ 2.14
Hmg20b-201ENSMUST00000020454 Shroom4Q1W617 1475 aa28.41■■■□□ 2.14
Hmg20b-201ENSMUST00000020454 Dhx29Q6PGC1 1365 aaKnown RBP28.4■■■□□ 2.14
Hmg20b-201ENSMUST00000020454 Npm2Q80W85 207 aa28.36■■■□□ 2.13
Hmg20b-201ENSMUST00000020454 Efcab5A0JP43 1406 aa28.36■■■□□ 2.13
Hmg20b-201ENSMUST00000020454 PtprkP35822 1457 aa28.34■■■□□ 2.13
Hmg20b-201ENSMUST00000020454 Duox2A2AQ99 1517 aa28.33■■■□□ 2.13
Hmg20b-201ENSMUST00000020454 Cep162Q6ZQ06 1403 aa28.28■■■□□ 2.12
Hmg20b-201ENSMUST00000020454 Crocc2F6XLV1 1638 aa28.28■■■□□ 2.12
Hmg20b-201ENSMUST00000020454 Eif4g1Q6NZJ6 1600 aaKnown RBP28.18■■■□□ 2.1
Hmg20b-201ENSMUST00000020454 Arhgap35Q91YM2 1499 aa28.12■■■□□ 2.09
Hmg20b-201ENSMUST00000020454 Lrriq1Q0P5X1 1673 aa28.11■■■□□ 2.09
Hmg20b-201ENSMUST00000020454 Map3k1P53349 1493 aa28.1■■■□□ 2.09
Hmg20b-201ENSMUST00000020454 Plb1Q3TTY0 1478 aa28.09■■■□□ 2.09
Hmg20b-201ENSMUST00000020454 Mroh2bQ7M6Y6 1581 aa28.08■■■□□ 2.09
Hmg20b-201ENSMUST00000020454 Samd9lQ69Z37 1561 aa28.07■■■□□ 2.08
Hmg20b-201ENSMUST00000020454 Urb2E9Q7L1 1524 aaKnown RBP28.07■■■□□ 2.08
Hmg20b-201ENSMUST00000020454 Zeb1Q64318 1117 aa28.05■■■□□ 2.08
Hmg20b-201ENSMUST00000020454 Myt1lP97500 1187 aa28■■■□□ 2.07
Hmg20b-201ENSMUST00000020454 Ift140E9PY46 1464 aa27.96■■■□□ 2.07
Hmg20b-201ENSMUST00000020454 SynmQ70IV5 1561 aa27.96■■■□□ 2.07
Hmg20b-201ENSMUST00000020454 AqrQ8CFQ3 1481 aaKnown RBP27.94■■■□□ 2.06
Hmg20b-201ENSMUST00000020454 Clip1Q922J3 1391 aa27.89■■■□□ 2.06
Hmg20b-201ENSMUST00000020454 Rad54l2Q99NG0 1466 aa27.88■■■□□ 2.05
Hmg20b-201ENSMUST00000020454 Disp1Q3TDN0 1521 aa27.87■■■□□ 2.05
Hmg20b-201ENSMUST00000020454 Carmil1Q6EDY6 1374 aa27.87■■■□□ 2.05
Hmg20b-201ENSMUST00000020454 Pbrm1Q8BSQ9 1634 aaKnown RBP27.83■■■□□ 2.05
Hmg20b-201ENSMUST00000020454 Magi3Q9EQJ9 1476 aa27.79■■■□□ 2.04
Hmg20b-201ENSMUST00000020454 Grin2aP35436 1464 aa27.77■■■□□ 2.04
Hmg20b-201ENSMUST00000020454 Eif4g3Q80XI3 1579 aaKnown RBP27.74■■■□□ 2.03
Hmg20b-201ENSMUST00000020454 Nup160Q9Z0W3 1402 aaKnown RBP27.74■■■□□ 2.03
Hmg20b-201ENSMUST00000020454 Pla2r1Q62028 1487 aa27.73■■■□□ 2.03
Hmg20b-201ENSMUST00000020454 Gpatch8A2A6A1 1505 aa27.69■■■□□ 2.02
Hmg20b-201ENSMUST00000020454 Polr1aO35134 1717 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms