RNA–Protein interactions for RNA: ENSMUST00000018842.13

Lhx1-201, Transcript of LIM/homeobox protein Lhx1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lhx1, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1-201ENSMUST00000018842 NischQ80TM9 1593 aa27.66■■■□□ 2.02
Lhx1-201ENSMUST00000018842 Gm35339A0A140LHH9 1649 aa27.18■■□□□ 1.94
Lhx1-201ENSMUST00000018842 Abcc9P70170 1546 aa26.8■■□□□ 1.88
Lhx1-201ENSMUST00000018842 Abcc8B2RUS7 1588 aa26.29■■□□□ 1.8
Lhx1-201ENSMUST00000018842 Rhox8Q6VSS7 320 aa25.64■■□□□ 1.7
Lhx1-201ENSMUST00000018842 Rtl1Q7M732 1744 aa24.81■■□□□ 1.56
Lhx1-201ENSMUST00000018842 Dcaf1Q80TR8 1506 aa24.56■■□□□ 1.52
Lhx1-201ENSMUST00000018842 ScribQ80U72 1612 aa24.52■■□□□ 1.52
Lhx1-201ENSMUST00000018842 Ccdc180J3QNE4 1664 aa24.29■■□□□ 1.48
Lhx1-201ENSMUST00000018842 Rb1cc1Q9ESK9 1588 aa24.23■■□□□ 1.47
Lhx1-201ENSMUST00000018842 Kdm5dQ62240 1548 aa24.15■■□□□ 1.46
Lhx1-201ENSMUST00000018842 NacadQ5SWP3 1504 aa24.11■■□□□ 1.45
Lhx1-201ENSMUST00000018842 Baz1aO88379 1555 aa23.95■■□□□ 1.42
Lhx1-201ENSMUST00000018842 Zcchc6Q5BLK4 1491 aaKnown RBP23.77■■□□□ 1.4
Lhx1-201ENSMUST00000018842 Ccdc136Q3TVA9 1136 aa23.68■■□□□ 1.38
Lhx1-201ENSMUST00000018842 Crybg2B7ZCC2 1516 aa23.59■■□□□ 1.37
Lhx1-201ENSMUST00000018842 Sycp2Q9CUU3 1500 aa23.52■■□□□ 1.36
Lhx1-201ENSMUST00000018842 Trim41Q5NCC3 630 aa23.37■■□□□ 1.33
Lhx1-201ENSMUST00000018842 Smarca2Q6DIC0 1577 aa23.31■■□□□ 1.32
Lhx1-201ENSMUST00000018842 HrcG5E8J6 738 aa23.28■■□□□ 1.32
Lhx1-201ENSMUST00000018842 Brd4Q9ESU6 1400 aaKnown RBP22.97■■□□□ 1.27
Lhx1-201ENSMUST00000018842 BicraF8VPZ9 1578 aa22.89■■□□□ 1.25
Lhx1-201ENSMUST00000018842 Cecr2E9Q2Z1 1453 aa22.79■■□□□ 1.24
Lhx1-201ENSMUST00000018842 Cngb1E1AZ71 1325 aa22.78■■□□□ 1.24
Lhx1-201ENSMUST00000018842 Esf1Q3V1V3 845 aaKnown RBP22.68■■□□□ 1.22
Lhx1-201ENSMUST00000018842 Cep164Q5DU05 1446 aa22.62■■□□□ 1.21
Lhx1-201ENSMUST00000018842 Synj1Q8CHC4 1574 aa22.58■■□□□ 1.2
Lhx1-201ENSMUST00000018842 Golga3P55937 1487 aa22.55■■□□□ 1.2
Lhx1-201ENSMUST00000018842 CftrP26361 1476 aa22.54■■□□□ 1.2
Lhx1-201ENSMUST00000018842 Rpgrip1Q9EPQ2 1331 aa22.52■■□□□ 1.2
Lhx1-201ENSMUST00000018842 Smarca4Q3TKT4 1613 aaKnown RBP22.49■■□□□ 1.19
Lhx1-201ENSMUST00000018842 Cttnbp2B9EJA2 1648 aa22.44■■□□□ 1.18
Lhx1-201ENSMUST00000018842 Rsf1E9PWW9 1441 aaKnown RBP22.34■■□□□ 1.17
Lhx1-201ENSMUST00000018842 Chic1Q8CBW7 227 aa22.33■■□□□ 1.17
Lhx1-201ENSMUST00000018842 Ehmt2Q9Z148 1263 aaKnown RBP22.3■■□□□ 1.16
Lhx1-201ENSMUST00000018842 Gab3Q8BSM5 595 aa22.28■■□□□ 1.16
Lhx1-201ENSMUST00000018842 Pds5bQ4VA53 1446 aaKnown RBP22.25■■□□□ 1.15
Lhx1-201ENSMUST00000018842 Atad2bE9Q166 1460 aaKnown RBP22.24■■□□□ 1.15
Lhx1-201ENSMUST00000018842 Ccdc88bQ4QRL3 1481 aa22.22■■□□□ 1.15
Lhx1-201ENSMUST00000018842 Iqgap2Q3UQ44 1575 aa22.19■■□□□ 1.14
Lhx1-201ENSMUST00000018842 Acin1Q9JIX8 1338 aaKnown RBP22.18■■□□□ 1.14
Lhx1-201ENSMUST00000018842 Top2bQ64511 1612 aa22.15■■□□□ 1.14
Lhx1-201ENSMUST00000018842 Fmn1Q05860 1466 aa22.03■■□□□ 1.12
Lhx1-201ENSMUST00000018842 Cc2d2aQ8CFW7 1633 aa21.94■■□□□ 1.1
Lhx1-201ENSMUST00000018842 Ercc6F8VPZ5 1481 aa21.9■■□□□ 1.1
Lhx1-201ENSMUST00000018842 Npm2Q80W85 207 aa21.77■■□□□ 1.08
Lhx1-201ENSMUST00000018842 Wdr62Q3U3T8 1523 aa21.77■■□□□ 1.08
Lhx1-201ENSMUST00000018842 Frmpd1A2AKB4 1549 aa21.77■■□□□ 1.07
Lhx1-201ENSMUST00000018842 Top2aQ01320 1528 aaKnown RBP21.76■■□□□ 1.07
Lhx1-201ENSMUST00000018842 Rapgef2Q8CHG7 1496 aa21.66■■□□□ 1.06
Lhx1-201ENSMUST00000018842 Myt1lP97500 1187 aa21.64■■□□□ 1.05
Lhx1-201ENSMUST00000018842 Kif15Q6P9L6 1387 aa21.63■■□□□ 1.05
Lhx1-201ENSMUST00000018842 Il27Q8K3I6 234 aa21.58■■□□□ 1.05
Lhx1-201ENSMUST00000018842 TnnQ80Z71 1560 aa21.57■■□□□ 1.04
Lhx1-201ENSMUST00000018842 Cep162Q6ZQ06 1403 aa21.55■■□□□ 1.04
Lhx1-201ENSMUST00000018842 Lamc3Q9R0B6 1581 aa21.53■■□□□ 1.04
Lhx1-201ENSMUST00000018842 Phldb1Q6PDH0 1371 aaKnown RBP21.5■■□□□ 1.03
Lhx1-201ENSMUST00000018842 Ccdc18Q640L5 1455 aa21.46■■□□□ 1.03
Lhx1-201ENSMUST00000018842 Ubl4bQ9CQ84 188 aa21.42■■□□□ 1.02
Lhx1-201ENSMUST00000018842 Zeb1Q64318 1117 aa21.38■■□□□ 1.01
Lhx1-201ENSMUST00000018842 Thoc2B1AZI6 1594 aaKnown RBP21.36■■□□□ 1.01
Lhx1-201ENSMUST00000018842 Npm1Q61937 292 aaKnown RBP21.36■■□□□ 1.01
Lhx1-201ENSMUST00000018842 Pcgf6Q99NA9 353 aa21.33■■□□□ 1.01
Lhx1-201ENSMUST00000018842 NefmP08553 848 aa21.33■■□□□ 1
Lhx1-201ENSMUST00000018842 Unc13aQ4KUS2 1712 aa21.32■■□□□ 1
Lhx1-201ENSMUST00000018842 Camsap1A2AHC3 1581 aa21.32■■□□□ 1
Lhx1-201ENSMUST00000018842 UbtfP25976 765 aaKnown RBP21.31■■□□□ 1
Lhx1-201ENSMUST00000018842 Clip1Q922J3 1391 aa21.3■■□□□ 1
Lhx1-201ENSMUST00000018842 Mier1Q5UAK0 511 aa21.28■■□□□ 1
Lhx1-201ENSMUST00000018842 Cux2P70298 1426 aa21.28■■□□□ 1
Lhx1-201ENSMUST00000018842 NrkQ9R0G8 1455 aa21.28■■□□□ 1
Lhx1-201ENSMUST00000018842 Shroom4Q1W617 1475 aa21.26■□□□□ 0.99
Lhx1-201ENSMUST00000018842 PtprkP35822 1457 aa21.2■□□□□ 0.98
Lhx1-201ENSMUST00000018842 Arhgap35Q91YM2 1499 aa21.2■□□□□ 0.98
Lhx1-201ENSMUST00000018842 Grin2bQ01097 1482 aa21.19■□□□□ 0.98
Lhx1-201ENSMUST00000018842 Fam135aQ6NS59 1506 aa21.19■□□□□ 0.98
Lhx1-201ENSMUST00000018842 Eif4g1Q6NZJ6 1600 aaKnown RBP21.18■□□□□ 0.98
Lhx1-201ENSMUST00000018842 Eea1Q8BL66 1411 aa21.14■□□□□ 0.97
Lhx1-201ENSMUST00000018842 Map3k1P53349 1493 aa21.13■□□□□ 0.97
Lhx1-201ENSMUST00000018842 LrpprcQ6PB66 1392 aaKnown RBP21.09■□□□□ 0.97
Lhx1-201ENSMUST00000018842 Plekhg3Q4VAC9 1341 aa21.08■□□□□ 0.97
Lhx1-201ENSMUST00000018842 Setd5Q5XJV7 1441 aa21.07■□□□□ 0.96
Lhx1-201ENSMUST00000018842 Baz1bQ9Z277 1479 aa21.05■□□□□ 0.96
Lhx1-201ENSMUST00000018842 Efcab5A0JP43 1406 aa21.04■□□□□ 0.96
Lhx1-201ENSMUST00000018842 Mroh2bQ7M6Y6 1581 aa21.02■□□□□ 0.95
Lhx1-201ENSMUST00000018842 Ap3b1Q9Z1T1 1105 aa21.01■□□□□ 0.95
Lhx1-201ENSMUST00000018842 PogzQ8BZH4 1409 aaKnown RBP20.99■□□□□ 0.95
Lhx1-201ENSMUST00000018842 Duox2A2AQ99 1517 aa20.94■□□□□ 0.94
Lhx1-201ENSMUST00000018842 Supt5hO55201 1082 aaKnown RBP20.94■□□□□ 0.94
Lhx1-201ENSMUST00000018842 AqrQ8CFQ3 1481 aaKnown RBP20.92■□□□□ 0.94
Lhx1-201ENSMUST00000018842 Carmil1Q6EDY6 1374 aa20.92■□□□□ 0.94
Lhx1-201ENSMUST00000018842 Dhx29Q6PGC1 1365 aaKnown RBP20.92■□□□□ 0.94
Lhx1-201ENSMUST00000018842 Arap1Q4LDD4 1452 aa20.89■□□□□ 0.93
Lhx1-201ENSMUST00000018842 Las1lA2BE28 776 aaKnown RBP20.88■□□□□ 0.93
Lhx1-201ENSMUST00000018842 Mrc2Q64449 1479 aa20.86■□□□□ 0.93
Lhx1-201ENSMUST00000018842 Arhgef5E9Q7D5 1581 aa20.85■□□□□ 0.93
Lhx1-201ENSMUST00000018842 BlmO88700 1416 aa20.78■□□□□ 0.92
Lhx1-201ENSMUST00000018842 SynmQ70IV5 1561 aa20.75■□□□□ 0.91
Lhx1-201ENSMUST00000018842 Ankrd26Q811D2 1581 aa20.74■□□□□ 0.91
Lhx1-201ENSMUST00000018842 Crocc2F6XLV1 1638 aa20.74■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms