RNA–Protein interactions for RNA: ENSMUST00000018744.14

Shmt1-201, Transcript of Serine hydroxymethyltransferase, cytosolic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shmt1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1-201ENSMUST00000018744 NischQ80TM9 1593 aa26.77■■□□□ 1.88
Shmt1-201ENSMUST00000018744 Gm35339A0A140LHH9 1649 aa26.22■■□□□ 1.79
Shmt1-201ENSMUST00000018744 Abcc9P70170 1546 aa25.98■■□□□ 1.75
Shmt1-201ENSMUST00000018744 Abcc8B2RUS7 1588 aa25.42■■□□□ 1.66
Shmt1-201ENSMUST00000018744 Rhox8Q6VSS7 320 aa24.89■■□□□ 1.57
Shmt1-201ENSMUST00000018744 Rtl1Q7M732 1744 aa24.33■■□□□ 1.49
Shmt1-201ENSMUST00000018744 Ccdc180J3QNE4 1664 aa23.95■■□□□ 1.43
Shmt1-201ENSMUST00000018744 Rpgrip1Q9EPQ2 1331 aa23.76■■□□□ 1.39
Shmt1-201ENSMUST00000018744 Dcaf1Q80TR8 1506 aa23.69■■□□□ 1.38
Shmt1-201ENSMUST00000018744 ScribQ80U72 1612 aa23.67■■□□□ 1.38
Shmt1-201ENSMUST00000018744 Zcchc6Q5BLK4 1491 aaKnown RBP23.6■■□□□ 1.37
Shmt1-201ENSMUST00000018744 Rb1cc1Q9ESK9 1588 aa23.44■■□□□ 1.34
Shmt1-201ENSMUST00000018744 Kdm5dQ62240 1548 aa23.26■■□□□ 1.31
Shmt1-201ENSMUST00000018744 Ehmt2Q9Z148 1263 aaKnown RBP23.24■■□□□ 1.31
Shmt1-201ENSMUST00000018744 Acin1Q9JIX8 1338 aaKnown RBP23.21■■□□□ 1.31
Shmt1-201ENSMUST00000018744 Baz1aO88379 1555 aa23.17■■□□□ 1.3
Shmt1-201ENSMUST00000018744 Ccdc136Q3TVA9 1136 aa23.11■■□□□ 1.29
Shmt1-201ENSMUST00000018744 NacadQ5SWP3 1504 aa23.07■■□□□ 1.28
Shmt1-201ENSMUST00000018744 Pcgf6Q99NA9 353 aa22.97■■□□□ 1.27
Shmt1-201ENSMUST00000018744 HrcG5E8J6 738 aa22.95■■□□□ 1.26
Shmt1-201ENSMUST00000018744 Crybg2B7ZCC2 1516 aa22.74■■□□□ 1.23
Shmt1-201ENSMUST00000018744 Smarca2Q6DIC0 1577 aa22.65■■□□□ 1.22
Shmt1-201ENSMUST00000018744 Trim41Q5NCC3 630 aa22.58■■□□□ 1.21
Shmt1-201ENSMUST00000018744 Sycp2Q9CUU3 1500 aa22.57■■□□□ 1.2
Shmt1-201ENSMUST00000018744 Supt5hO55201 1082 aaKnown RBP22.4■■□□□ 1.18
Shmt1-201ENSMUST00000018744 Cep164Q5DU05 1446 aa22.24■■□□□ 1.15
Shmt1-201ENSMUST00000018744 Neurod1Q60867 357 aa22.2■■□□□ 1.14
Shmt1-201ENSMUST00000018744 Cecr2E9Q2Z1 1453 aa22.16■■□□□ 1.14
Shmt1-201ENSMUST00000018744 Brd4Q9ESU6 1400 aaKnown RBP22.15■■□□□ 1.14
Shmt1-201ENSMUST00000018744 Cngb1E1AZ71 1325 aa22.07■■□□□ 1.12
Shmt1-201ENSMUST00000018744 BicraF8VPZ9 1578 aa22.06■■□□□ 1.12
Shmt1-201ENSMUST00000018744 Rsf1E9PWW9 1441 aaKnown RBP22■■□□□ 1.11
Shmt1-201ENSMUST00000018744 Chic1Q8CBW7 227 aa22■■□□□ 1.11
Shmt1-201ENSMUST00000018744 Synj1Q8CHC4 1574 aa21.94■■□□□ 1.1
Shmt1-201ENSMUST00000018744 Golga3P55937 1487 aa21.92■■□□□ 1.1
Shmt1-201ENSMUST00000018744 Zeb1Q64318 1117 aa21.88■■□□□ 1.09
Shmt1-201ENSMUST00000018744 Ccdc88bQ4QRL3 1481 aa21.86■■□□□ 1.09
Shmt1-201ENSMUST00000018744 CftrP26361 1476 aa21.83■■□□□ 1.09
Shmt1-201ENSMUST00000018744 Gab3Q8BSM5 595 aa21.82■■□□□ 1.08
Shmt1-201ENSMUST00000018744 Esf1Q3V1V3 845 aaKnown RBP21.75■■□□□ 1.07
Shmt1-201ENSMUST00000018744 Las1lA2BE28 776 aaKnown RBP21.73■■□□□ 1.07
Shmt1-201ENSMUST00000018744 Cttnbp2B9EJA2 1648 aa21.63■■□□□ 1.05
Shmt1-201ENSMUST00000018744 1700123L14RikQ3V2K7 440 aa21.62■■□□□ 1.05
Shmt1-201ENSMUST00000018744 Top2bQ64511 1612 aa21.61■■□□□ 1.05
Shmt1-201ENSMUST00000018744 Smarca4Q3TKT4 1613 aaKnown RBP21.58■■□□□ 1.04
Shmt1-201ENSMUST00000018744 Sall2Q9QX96 1004 aa21.54■■□□□ 1.04
Shmt1-201ENSMUST00000018744 Csrnp3P59055 597 aa21.53■■□□□ 1.04
Shmt1-201ENSMUST00000018744 Cc2d2aQ8CFW7 1633 aa21.4■■□□□ 1.02
Shmt1-201ENSMUST00000018744 Anks4bQ8K3X6 423 aa21.36■■□□□ 1.01
Shmt1-201ENSMUST00000018744 NefmP08553 848 aa21.33■■□□□ 1
Shmt1-201ENSMUST00000018744 Mier1Q5UAK0 511 aa21.33■■□□□ 1
Shmt1-201ENSMUST00000018744 Fmn1Q05860 1466 aa21.32■■□□□ 1
Shmt1-201ENSMUST00000018744 Iqgap2Q3UQ44 1575 aa21.3■■□□□ 1
Shmt1-201ENSMUST00000018744 Rapgef2Q8CHG7 1496 aa21.25■□□□□ 0.99
Shmt1-201ENSMUST00000018744 Top2aQ01320 1528 aaKnown RBP21.22■□□□□ 0.99
Shmt1-201ENSMUST00000018744 Atad2bE9Q166 1460 aaKnown RBP21.2■□□□□ 0.98
Shmt1-201ENSMUST00000018744 CenpbP27790 599 aa21.18■□□□□ 0.98
Shmt1-201ENSMUST00000018744 Wdr66E9Q743 1299 aa21.16■□□□□ 0.98
Shmt1-201ENSMUST00000018744 Gm38655A0A286YDK6 273 aa21.13■□□□□ 0.97
Shmt1-201ENSMUST00000018744 Ppargc1bQ8VHJ7 1014 aa21.13■□□□□ 0.97
Shmt1-201ENSMUST00000018744 Cep162Q6ZQ06 1403 aa21.09■□□□□ 0.97
Shmt1-201ENSMUST00000018744 Pds5bQ4VA53 1446 aaKnown RBP21.08■□□□□ 0.96
Shmt1-201ENSMUST00000018744 Aebp2Q9Z248 504 aaKnown RBP21.05■□□□□ 0.96
Shmt1-201ENSMUST00000018744 Myt1lP97500 1187 aa21.04■□□□□ 0.96
Shmt1-201ENSMUST00000018744 Cdk11bP24788 784 aaKnown RBP21.02■□□□□ 0.96
Shmt1-201ENSMUST00000018744 UbtfP25976 765 aaKnown RBP20.99■□□□□ 0.95
Shmt1-201ENSMUST00000018744 Aplp2Q06335 707 aa20.99■□□□□ 0.95
Shmt1-201ENSMUST00000018744 Nop58Q6DFW4 536 aaKnown RBP20.98■□□□□ 0.95
Shmt1-201ENSMUST00000018744 Npm2Q80W85 207 aa20.98■□□□□ 0.95
Shmt1-201ENSMUST00000018744 Myt1Q8CFC2 1127 aa20.94■□□□□ 0.94
Shmt1-201ENSMUST00000018744 TnnQ80Z71 1560 aa20.92■□□□□ 0.94
Shmt1-201ENSMUST00000018744 Frmpd1A2AKB4 1549 aa20.9■□□□□ 0.94
Shmt1-201ENSMUST00000018744 Wdr62Q3U3T8 1523 aa20.86■□□□□ 0.93
Shmt1-201ENSMUST00000018744 Eif4g1Q6NZJ6 1600 aaKnown RBP20.85■□□□□ 0.93
Shmt1-201ENSMUST00000018744 Clip1Q922J3 1391 aa20.8■□□□□ 0.92
Shmt1-201ENSMUST00000018744 Lamc3Q9R0B6 1581 aa20.75■□□□□ 0.91
Shmt1-201ENSMUST00000018744 PtprkP35822 1457 aa20.75■□□□□ 0.91
Shmt1-201ENSMUST00000018744 ClspnQ80YR7 1315 aa20.74■□□□□ 0.91
Shmt1-201ENSMUST00000018744 Kif15Q6P9L6 1387 aa20.73■□□□□ 0.91
Shmt1-201ENSMUST00000018744 Arhgap35Q91YM2 1499 aa20.73■□□□□ 0.91
Shmt1-201ENSMUST00000018744 Il27Q8K3I6 234 aa20.72■□□□□ 0.91
Shmt1-201ENSMUST00000018744 Plekhg3Q4VAC9 1341 aa20.71■□□□□ 0.91
Shmt1-201ENSMUST00000018744 NrkQ9R0G8 1455 aa20.69■□□□□ 0.9
Shmt1-201ENSMUST00000018744 DiexfQ8BTT6 772 aaKnown RBP20.69■□□□□ 0.9
Shmt1-201ENSMUST00000018744 Ercc6F8VPZ5 1481 aa20.69■□□□□ 0.9
Shmt1-201ENSMUST00000018744 Camsap1A2AHC3 1581 aa20.59■□□□□ 0.89
Shmt1-201ENSMUST00000018744 Shroom4Q1W617 1475 aa20.59■□□□□ 0.89
Shmt1-201ENSMUST00000018744 Unc13aQ4KUS2 1712 aa20.58■□□□□ 0.88
Shmt1-201ENSMUST00000018744 Eea1Q8BL66 1411 aa20.57■□□□□ 0.88
Shmt1-201ENSMUST00000018744 Arap1Q4LDD4 1452 aa20.54■□□□□ 0.88
Shmt1-201ENSMUST00000018744 Fam71e1A1L3C1 212 aa20.54■□□□□ 0.88
Shmt1-201ENSMUST00000018744 Mapk8ip2Q9ERE9 830 aa20.54■□□□□ 0.88
Shmt1-201ENSMUST00000018744 Ncapd3Q6ZQK0 1506 aa20.52■□□□□ 0.88
Shmt1-201ENSMUST00000018744 Bcl11aQ9QYE3 773 aa20.51■□□□□ 0.87
Shmt1-201ENSMUST00000018744 Ccdc18Q640L5 1455 aa20.51■□□□□ 0.87
Shmt1-201ENSMUST00000018744 SafbD3YXK2 937 aaKnown RBP20.51■□□□□ 0.87
Shmt1-201ENSMUST00000018744 Map3k1P53349 1493 aa20.5■□□□□ 0.87
Shmt1-201ENSMUST00000018744 Grin2bQ01097 1482 aa20.49■□□□□ 0.87
Shmt1-201ENSMUST00000018744 Setd5Q5XJV7 1441 aa20.49■□□□□ 0.87
Shmt1-201ENSMUST00000018744 Ap3b1Q9Z1T1 1105 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 160.7 ms