RNA–Protein interactions for RNA: ENSMUST00000013995.12

Abca4-201, Transcript of Retinal-specific ATP-binding cassette transporter, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Abca4, Length 7,263 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4-201ENSMUST00000013995 NischQ80TM9 1593 aa14.35□□□□□ -0.11
Abca4-201ENSMUST00000013995 Rhox8Q6VSS7 320 aa14.18□□□□□ -0.14
Abca4-201ENSMUST00000013995 Abcc9P70170 1546 aa13.79□□□□□ -0.2
Abca4-201ENSMUST00000013995 Gm35339A0A140LHH9 1649 aa13.65□□□□□ -0.22
Abca4-201ENSMUST00000013995 Rtl1Q7M732 1744 aa13.45□□□□□ -0.26
Abca4-201ENSMUST00000013995 Abcc8B2RUS7 1588 aa13.44□□□□□ -0.26
Abca4-201ENSMUST00000013995 Ccdc180J3QNE4 1664 aa13.27□□□□□ -0.29
Abca4-201ENSMUST00000013995 Rpgrip1Q9EPQ2 1331 aa13.23□□□□□ -0.29
Abca4-201ENSMUST00000013995 Ccdc136Q3TVA9 1136 aa12.88□□□□□ -0.35
Abca4-201ENSMUST00000013995 Trim41Q5NCC3 630 aa12.82□□□□□ -0.36
Abca4-201ENSMUST00000013995 HrcG5E8J6 738 aa12.8□□□□□ -0.36
Abca4-201ENSMUST00000013995 Dcaf1Q80TR8 1506 aa12.65□□□□□ -0.38
Abca4-201ENSMUST00000013995 Rb1cc1Q9ESK9 1588 aa12.6□□□□□ -0.39
Abca4-201ENSMUST00000013995 Acin1Q9JIX8 1338 aaKnown RBP12.6□□□□□ -0.39
Abca4-201ENSMUST00000013995 Ehmt2Q9Z148 1263 aaKnown RBP12.55□□□□□ -0.4
Abca4-201ENSMUST00000013995 Zcchc6Q5BLK4 1491 aaKnown RBP12.54□□□□□ -0.4
Abca4-201ENSMUST00000013995 Cngb1E1AZ71 1325 aa12.53□□□□□ -0.4
Abca4-201ENSMUST00000013995 Esf1Q3V1V3 845 aaKnown RBP12.46□□□□□ -0.42
Abca4-201ENSMUST00000013995 Baz1aO88379 1555 aa12.45□□□□□ -0.42
Abca4-201ENSMUST00000013995 NacadQ5SWP3 1504 aa12.43□□□□□ -0.42
Abca4-201ENSMUST00000013995 Gab3Q8BSM5 595 aa12.32□□□□□ -0.44
Abca4-201ENSMUST00000013995 Kdm5dQ62240 1548 aa12.32□□□□□ -0.44
Abca4-201ENSMUST00000013995 ScribQ80U72 1612 aa12.24□□□□□ -0.45
Abca4-201ENSMUST00000013995 Brd4Q9ESU6 1400 aaKnown RBP12.24□□□□□ -0.45
Abca4-201ENSMUST00000013995 Cep164Q5DU05 1446 aa12.23□□□□□ -0.45
Abca4-201ENSMUST00000013995 NefmP08553 848 aa12.19□□□□□ -0.46
Abca4-201ENSMUST00000013995 Crybg2B7ZCC2 1516 aa12.19□□□□□ -0.46
Abca4-201ENSMUST00000013995 Las1lA2BE28 776 aaKnown RBP12.11□□□□□ -0.47
Abca4-201ENSMUST00000013995 Npm2Q80W85 207 aa12.09□□□□□ -0.47
Abca4-201ENSMUST00000013995 Zeb1Q64318 1117 aa12.03□□□□□ -0.48
Abca4-201ENSMUST00000013995 Smarca2Q6DIC0 1577 aa12.02□□□□□ -0.49
Abca4-201ENSMUST00000013995 Sycp2Q9CUU3 1500 aa12.01□□□□□ -0.49
Abca4-201ENSMUST00000013995 Myt1lP97500 1187 aa12□□□□□ -0.49
Abca4-201ENSMUST00000013995 Pcgf6Q99NA9 353 aa11.99□□□□□ -0.49
Abca4-201ENSMUST00000013995 Golga3P55937 1487 aa11.96□□□□□ -0.49
Abca4-201ENSMUST00000013995 Wdr66E9Q743 1299 aa11.93□□□□□ -0.5
Abca4-201ENSMUST00000013995 Chic1Q8CBW7 227 aa11.92□□□□□ -0.5
Abca4-201ENSMUST00000013995 UbtfP25976 765 aaKnown RBP11.91□□□□□ -0.5
Abca4-201ENSMUST00000013995 Rsf1E9PWW9 1441 aaKnown RBP11.83□□□□□ -0.52
Abca4-201ENSMUST00000013995 Mier1Q5UAK0 511 aa11.82□□□□□ -0.52
Abca4-201ENSMUST00000013995 Supt5hO55201 1082 aaKnown RBP11.76□□□□□ -0.53
Abca4-201ENSMUST00000013995 CftrP26361 1476 aa11.71□□□□□ -0.54
Abca4-201ENSMUST00000013995 Il27Q8K3I6 234 aa11.7□□□□□ -0.54
Abca4-201ENSMUST00000013995 Cecr2E9Q2Z1 1453 aa11.7□□□□□ -0.54
Abca4-201ENSMUST00000013995 Ccdc88bQ4QRL3 1481 aa11.69□□□□□ -0.54
Abca4-201ENSMUST00000013995 Synj1Q8CHC4 1574 aa11.68□□□□□ -0.54
Abca4-201ENSMUST00000013995 Fmn1Q05860 1466 aa11.65□□□□□ -0.54
Abca4-201ENSMUST00000013995 Cttnbp2B9EJA2 1648 aa11.64□□□□□ -0.55
Abca4-201ENSMUST00000013995 TonslQ6NZL6 1363 aa11.63□□□□□ -0.55
Abca4-201ENSMUST00000013995 Clip1Q922J3 1391 aa11.63□□□□□ -0.55
Abca4-201ENSMUST00000013995 Smarca4Q3TKT4 1613 aaKnown RBP11.6□□□□□ -0.55
Abca4-201ENSMUST00000013995 Cdk11bP24788 784 aaKnown RBP11.59□□□□□ -0.55
Abca4-201ENSMUST00000013995 Ube2uB1AUC4 352 aa11.59□□□□□ -0.55
Abca4-201ENSMUST00000013995 ClspnQ80YR7 1315 aa11.55□□□□□ -0.56
Abca4-201ENSMUST00000013995 Pds5bQ4VA53 1446 aaKnown RBP11.55□□□□□ -0.56
Abca4-201ENSMUST00000013995 Stra8P70278 393 aa11.55□□□□□ -0.56
Abca4-201ENSMUST00000013995 Plekhg3Q4VAC9 1341 aa11.54□□□□□ -0.56
Abca4-201ENSMUST00000013995 Nop58Q6DFW4 536 aaKnown RBP11.53□□□□□ -0.56
Abca4-201ENSMUST00000013995 Ap3b1Q9Z1T1 1105 aa11.52□□□□□ -0.56
Abca4-201ENSMUST00000013995 Npm1Q61937 292 aaKnown RBP11.52□□□□□ -0.57
Abca4-201ENSMUST00000013995 Cep162Q6ZQ06 1403 aa11.5□□□□□ -0.57
Abca4-201ENSMUST00000013995 Ercc6F8VPZ5 1481 aa11.48□□□□□ -0.57
Abca4-201ENSMUST00000013995 Atad2bE9Q166 1460 aaKnown RBP11.47□□□□□ -0.57
Abca4-201ENSMUST00000013995 Rapgef2Q8CHG7 1496 aa11.46□□□□□ -0.57
Abca4-201ENSMUST00000013995 Sall2Q9QX96 1004 aa11.46□□□□□ -0.58
Abca4-201ENSMUST00000013995 Fam50aQ9WV03 339 aaKnown RBP11.46□□□□□ -0.58
Abca4-201ENSMUST00000013995 CenpbP27790 599 aa11.45□□□□□ -0.58
Abca4-201ENSMUST00000013995 BicraF8VPZ9 1578 aa11.45□□□□□ -0.58
Abca4-201ENSMUST00000013995 Eea1Q8BL66 1411 aa11.44□□□□□ -0.58
Abca4-201ENSMUST00000013995 Kif15Q6P9L6 1387 aa11.44□□□□□ -0.58
Abca4-201ENSMUST00000013995 Pelp1Q9DBD5 1123 aaKnown RBP11.43□□□□□ -0.58
Abca4-201ENSMUST00000013995 Ccdc18Q640L5 1455 aa11.43□□□□□ -0.58
Abca4-201ENSMUST00000013995 Top2bQ64511 1612 aa11.43□□□□□ -0.58
Abca4-201ENSMUST00000013995 Tnnt3Q9QZ47 272 aa11.41□□□□□ -0.58
Abca4-201ENSMUST00000013995 Iqgap2Q3UQ44 1575 aa11.41□□□□□ -0.58
Abca4-201ENSMUST00000013995 Setd5Q5XJV7 1441 aa11.41□□□□□ -0.58
Abca4-201ENSMUST00000013995 Ccer2J3QPU5 274 aa11.39□□□□□ -0.59
Abca4-201ENSMUST00000013995 Neurod1Q60867 357 aa11.38□□□□□ -0.59
Abca4-201ENSMUST00000013995 NclP09405 707 aaKnown RBP11.38□□□□□ -0.59
Abca4-201ENSMUST00000013995 Top2aQ01320 1528 aaKnown RBP11.38□□□□□ -0.59
Abca4-201ENSMUST00000013995 Cc2d2aQ8CFW7 1633 aa11.37□□□□□ -0.59
Abca4-201ENSMUST00000013995 Anks4bQ8K3X6 423 aa11.36□□□□□ -0.59
Abca4-201ENSMUST00000013995 Ubl4bQ9CQ84 188 aa11.33□□□□□ -0.6
Abca4-201ENSMUST00000013995 BlmO88700 1416 aa11.32□□□□□ -0.6
Abca4-201ENSMUST00000013995 Lmod2Q3UHZ5 550 aa11.31□□□□□ -0.6
Abca4-201ENSMUST00000013995 Ppargc1bQ8VHJ7 1014 aa11.26□□□□□ -0.61
Abca4-201ENSMUST00000013995 Myt1Q8CFC2 1127 aa11.25□□□□□ -0.61
Abca4-201ENSMUST00000013995 Eid3Q3V124 375 aa11.23□□□□□ -0.61
Abca4-201ENSMUST00000013995 Aebp2Q9Z248 504 aaKnown RBP11.22□□□□□ -0.61
Abca4-201ENSMUST00000013995 Mia2Q91ZV0 1396 aa11.19□□□□□ -0.62
Abca4-201ENSMUST00000013995 Phldb1Q6PDH0 1371 aaKnown RBP11.18□□□□□ -0.62
Abca4-201ENSMUST00000013995 Shroom4Q1W617 1475 aa11.17□□□□□ -0.62
Abca4-201ENSMUST00000013995 NrkQ9R0G8 1455 aa11.16□□□□□ -0.62
Abca4-201ENSMUST00000013995 CntlnA2AM05 1397 aa11.16□□□□□ -0.62
Abca4-201ENSMUST00000013995 Map3k1P53349 1493 aa11.15□□□□□ -0.62
Abca4-201ENSMUST00000013995 Baz1bQ9Z277 1479 aa11.15□□□□□ -0.62
Abca4-201ENSMUST00000013995 NrdcQ8BHG1 1161 aa11.15□□□□□ -0.62
Abca4-201ENSMUST00000013995 Carmil1Q6EDY6 1374 aa11.14□□□□□ -0.63
Abca4-201ENSMUST00000013995 Aplp2Q06335 707 aa11.14□□□□□ -0.63
Abca4-201ENSMUST00000013995 Arhgap35Q91YM2 1499 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms