RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 YJL045WP47052 634 aa3.35□□□□□ -1.87
snR55snR55 TUB2P02557 457 aaKnown RBP3.34□□□□□ -1.87
snR55snR55 SRO9P25567 434 aaKnown RBP3.34□□□□□ -1.87
snR55snR55 XKS1P42826 600 aa3.34□□□□□ -1.87
snR55snR55 FOL2P51601 243 aaKnown RBP3.34□□□□□ -1.87
snR55snR55 FRT1Q99332 602 aa3.34□□□□□ -1.87
snR55snR55 MSH3P25336 1018 aa3.33□□□□□ -1.88
snR55snR55 MTR4P47047 1073 aaKnown RBP3.33□□□□□ -1.88
snR55snR55 HRK1Q08732 759 aaKnown RBP3.33□□□□□ -1.88
snR55snR55 SHU2P38957 223 aa3.32□□□□□ -1.88
snR55snR55 TAT2P38967 592 aa3.32□□□□□ -1.88
snR55snR55 MDJ2P42834 146 aa3.32□□□□□ -1.88
snR55snR55 GCN5Q03330 439 aa3.32□□□□□ -1.88
snR55snR55 NOC3Q07896 663 aaPredicted RBP3.32□□□□□ -1.88
snR55snR55 RSC58Q07979 502 aa3.32□□□□□ -1.88
snR55snR55 RCL1Q08096 367 aaPredicted RBP3.32□□□□□ -1.88
snR55snR55 PNS1Q12412 539 aa3.32□□□□□ -1.88
snR55snR55 UGA4P32837 571 aa3.31□□□□□ -1.88
snR55snR55 QNS1P38795 714 aaKnown RBP3.31□□□□□ -1.88
snR55snR55 MEF2P39677 819 aa3.31□□□□□ -1.88
snR55snR55 SPT20P50875 604 aa3.31□□□□□ -1.88
snR55snR55 SLI1P53304 468 aa3.31□□□□□ -1.88
snR55snR55 SGD1Q06132 899 aa3.31□□□□□ -1.88
snR55snR55 YCS4Q06156 1176 aa3.31□□□□□ -1.88
snR55snR55 YSC84P32793 468 aa3.3□□□□□ -1.88
snR55snR55 GRS1P38088 690 aaKnown RBP3.3□□□□□ -1.88
snR55snR55 HSE1P38753 452 aa3.3□□□□□ -1.88
snR55snR55 LAM1P38851 1228 aa3.3□□□□□ -1.88
snR55snR55 MPT5P39016 859 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
snR55snR55 YNR063WP53749 607 aa3.3□□□□□ -1.88
snR55snR55 UBP3Q01477 912 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
snR55snR55 NUT2Q06213 157 aa3.3□□□□□ -1.88
snR55snR55 SPS1P08458 490 aa3.29□□□□□ -1.88
snR55snR55 HEM13P11353 328 aaKnown RBP3.29□□□□□ -1.88
snR55snR55 VMA4P22203 233 aaKnown RBP3.29□□□□□ -1.88
snR55snR55 RDH54P38086 958 aa3.29□□□□□ -1.88
snR55snR55 ERP5P38819 212 aa3.29□□□□□ -1.88
snR55snR55 PEX13P80667 386 aa3.29□□□□□ -1.88
snR55snR55 PLB2Q03674 706 aa3.29□□□□□ -1.88
snR55snR55 DUS4Q06063 367 aa3.29□□□□□ -1.88
snR55snR55 LAP2Q10740 671 aa3.29□□□□□ -1.88
snR55snR55 PUS9Q12069 462 aa3.29□□□□□ -1.88
snR55snR55 CYC1P00044 109 aaPredicted RBP3.28□□□□□ -1.88
snR55snR55 SCP160P06105 1222 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
snR55snR55 AFG2P32794 780 aa3.28□□□□□ -1.88
snR55snR55 YPT53P36019 220 aa3.28□□□□□ -1.88
snR55snR55 BAP2P38084 609 aa3.28□□□□□ -1.88
snR55snR55 ENV11P53246 860 aa3.28□□□□□ -1.88
snR55snR55 RPL34AP87262 121 aaPredicted RBP3.28□□□□□ -1.88
snR55snR55 PRP40P33203 583 aaKnown RBP3.27□□□□□ -1.89
snR55snR55 SAM37P50110 327 aa3.27□□□□□ -1.89
snR55snR55 RKM2Q03942 479 aa3.27□□□□□ -1.89
snR55snR55 TOS4Q06266 489 aa3.27□□□□□ -1.89
snR55snR55 NBA1Q08229 501 aaKnown RBP3.27□□□□□ -1.89
snR55snR55 SPO21Q12411 609 aa3.27□□□□□ -1.89
snR55snR55 TRM2P33753 639 aa3.26□□□□□ -1.89
snR55snR55 CIC1P38779 376 aaKnown RBP3.26□□□□□ -1.89
snR55snR55 PEX28P38848 579 aa3.26□□□□□ -1.89
snR55snR55 GPB2P39717 880 aa3.26□□□□□ -1.89
snR55snR55 VPS53P47061 822 aa3.26□□□□□ -1.89
snR55snR55 ULP1Q02724 621 aa3.26□□□□□ -1.89
snR55snR55 ROT1Q03691 256 aa3.26□□□□□ -1.89
snR55snR55 YBL113CQ7M4S9 792 aa3.26□□□□□ -1.89
snR55snR55 COQ4O13525 335 aa3.25□□□□□ -1.89
snR55snR55 CDC6P09119 513 aa3.25□□□□□ -1.89
snR55snR55 SNF5P18480 905 aa3.25□□□□□ -1.89
snR55snR55 SRM1P21827 482 aa3.25□□□□□ -1.89
snR55snR55 KIP1P28742 1111 aa3.25□□□□□ -1.89
snR55snR55 DOM34P33309 386 aa3.25□□□□□ -1.89
snR55snR55 ADD66P36040 267 aa3.25□□□□□ -1.89
snR55snR55 SEC26P41810 973 aaKnown RBP3.25□□□□□ -1.89
snR55snR55 RSM26P47141 266 aa3.25□□□□□ -1.89
snR55snR55 MSE1P48525 536 aa3.25□□□□□ -1.89
snR55snR55 SUN4P53616 420 aa3.25□□□□□ -1.89
snR55snR55 CDC20P26309 610 aa3.24□□□□□ -1.89
snR55snR55 LST4P34239 828 aa3.24□□□□□ -1.89
snR55snR55 HNT2P49775 206 aa3.24□□□□□ -1.89
snR55snR55 YGL140CP53120 1219 aa3.24□□□□□ -1.89
snR55snR55 RIB2Q12362 591 aaKnown RBP3.24□□□□□ -1.89
snR55snR55 PUF4P25339 888 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
snR55snR55 SQT1P35184 431 aa3.23□□□□□ -1.89
snR55snR55 ATG14P38270 344 aa3.23□□□□□ -1.89
snR55snR55 CCZ1P38273 704 aa3.23□□□□□ -1.89
snR55snR55 PIK1P39104 1066 aa3.23□□□□□ -1.89
snR55snR55 DAL4Q04895 635 aa3.23□□□□□ -1.89
snR55snR55 TMA10Q06177 86 aa3.23□□□□□ -1.89
snR55snR55 YOR352WQ08816 343 aa3.23□□□□□ -1.89
snR55snR55 GAL10P04397 699 aa3.22□□□□□ -1.89
snR55snR55 PHO4P07270 312 aaKnown RBP3.22□□□□□ -1.89
snR55snR55 SEC23P15303 768 aaKnown RBP3.22□□□□□ -1.89
snR55snR55 HCM1P25364 564 aa3.22□□□□□ -1.89
snR55snR55 CHS7P38843 316 aa3.22□□□□□ -1.89
snR55snR55 YFL054CP43549 646 aa3.22□□□□□ -1.89
snR55snR55 TNA1P53322 534 aa3.22□□□□□ -1.89
snR55snR55 HOS3Q02959 697 aaKnown RBP3.22□□□□□ -1.89
snR55snR55 NTO1Q12311 748 aa3.22□□□□□ -1.89
snR55snR55 CMP2P14747 604 aa3.21□□□□□ -1.9
snR55snR55 STE11P23561 717 aa3.21□□□□□ -1.9
snR55snR55 CDC3P32457 520 aaKnown RBP3.21□□□□□ -1.9
snR55snR55 YPL109CQ02981 657 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 105.5 ms