RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W YPL034WQ03083 165 aa6.96□□□□□ -1.3
YDC1YPL087W GIC2Q06648 383 aa6.96□□□□□ -1.3
YDC1YPL087W TMA46Q12000 345 aaKnown RBP6.96□□□□□ -1.3
YDC1YPL087W RDH54P38086 958 aa6.95□□□□□ -1.3
YDC1YPL087W EST2Q06163 884 aa6.95□□□□□ -1.3
YDC1YPL087W MRL1Q06815 381 aa6.95□□□□□ -1.3
YDC1YPL087W RTT10Q08924 1013 aa6.95□□□□□ -1.3
YDC1YPL087W SAF1P38352 637 aa6.94□□□□□ -1.3
YDC1YPL087W MAD1P40957 749 aa6.94□□□□□ -1.3
YDC1YPL087W CCT8P47079 568 aaKnown RBP6.94□□□□□ -1.3
YDC1YPL087W ALG6Q12001 544 aaKnown RBP6.94□□□□□ -1.3
YDC1YPL087W GPT2P36148 743 aa6.93□□□□□ -1.3
YDC1YPL087W PAM1P37304 830 aaKnown RBP6.93□□□□□ -1.3
YDC1YPL087W AKR1P39010 764 aa6.93□□□□□ -1.3
YDC1YPL087W KRI1P42846 591 aaKnown RBP6.93□□□□□ -1.3
YDC1YPL087W LSB3P43603 459 aaKnown RBP6.93□□□□□ -1.3
YDC1YPL087W VPS53P47061 822 aa6.93□□□□□ -1.3
YDC1YPL087W YGR045CP53229 120 aa6.93□□□□□ -1.3
YDC1YPL087W SIW14P53965 281 aa6.93□□□□□ -1.3
YDC1YPL087W JIP5Q06214 492 aaPredicted RBP6.93□□□□□ -1.3
YDC1YPL087W YOR059CQ08448 450 aaKnown RBP6.93□□□□□ -1.3
YDC1YPL087W NSI1Q12457 570 aa6.93□□□□□ -1.3
YDC1YPL087W BPT1P14772 1559 aa6.93□□□□□ -1.3
YDC1YPL087W CHS2P14180 963 aa6.92□□□□□ -1.3
YDC1YPL087W SMY2P32909 740 aaKnown RBP6.92□□□□□ -1.3
YDC1YPL087W MET10P39692 1035 aa6.92□□□□□ -1.3
YDC1YPL087W ELA1P53861 379 aaPredicted RBP6.92□□□□□ -1.3
YDC1YPL087W HDA2Q06629 674 aa6.92□□□□□ -1.3
YDC1YPL087W MCA1Q08601 432 aa6.92□□□□□ -1.3
YDC1YPL087W SSN2P38931 1420 aa6.92□□□□□ -1.3
YDC1YPL087W PGM1P33401 570 aaKnown RBP6.91□□□□□ -1.3
YDC1YPL087W KAE1P36132 386 aa6.91□□□□□ -1.3
YDC1YPL087W SPO74P45819 413 aa6.91□□□□□ -1.3
YDC1YPL087W GCR1P07261 785 aa6.9□□□□□ -1.3
YDC1YPL087W MSH4P40965 878 aaPredicted RBP6.9□□□□□ -1.3
YDC1YPL087W MMM1P41800 426 aa6.9□□□□□ -1.3
YDC1YPL087W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3 RIP-Chip
YDC1YPL087W HRK1Q08732 759 aaKnown RBP6.9□□□□□ -1.3
YDC1YPL087W CDC34P14682 295 aa6.89□□□□□ -1.31
YDC1YPL087W MSB1P21339 1137 aaKnown RBP6.89□□□□□ -1.31
YDC1YPL087W NFS1P25374 497 aa6.89□□□□□ -1.31
YDC1YPL087W CIT3P43635 486 aa6.89□□□□□ -1.31
YDC1YPL087W YNR063WP53749 607 aa6.89□□□□□ -1.31
YDC1YPL087W PIN2Q12057 282 aa6.89□□□□□ -1.31
YDC1YPL087W DED1P06634 604 aaKnown RBP6.88□□□□□ -1.31
YDC1YPL087W RPS4AP0CX35 261 aaKnown RBP6.88□□□□□ -1.31
YDC1YPL087W RPS4BP0CX36 261 aaKnown RBP6.88□□□□□ -1.31
YDC1YPL087W ALT1P52893 592 aa6.88□□□□□ -1.31
YDC1YPL087W XRN1P22147 1528 aaKnown RBP6.87□□□□□ -1.31
YDC1YPL087W SBP1P10080 294 aaKnown RBP6.87□□□□□ -1.31
YDC1YPL087W HEM13P11353 328 aaKnown RBP6.87□□□□□ -1.31
YDC1YPL087W NAM7P30771 971 aaKnown RBP6.87□□□□□ -1.31
YDC1YPL087W SNF7P39929 240 aaKnown RBP6.87□□□□□ -1.31
YDC1YPL087W CWC24P53769 259 aa6.87□□□□□ -1.31
YDC1YPL087W RET1P22276 1149 aaKnown RBP6.86□□□□□ -1.31
YDC1YPL087W RSA3Q05942 220 aaKnown RBP6.86□□□□□ -1.31
YDC1YPL087W YLR122CQ12312 125 aa6.86□□□□□ -1.31
YDC1YPL087W PTC5Q12511 572 aa6.86□□□□□ -1.31
YDC1YPL087W SYP1P25623 870 aaKnown RBP6.85□□□□□ -1.31
YDC1YPL087W MKK2P32491 506 aa6.85□□□□□ -1.31
YDC1YPL087W GNP1P48813 663 aa6.85□□□□□ -1.31
YDC1YPL087W ROD1Q02805 837 aa6.85□□□□□ -1.31
YDC1YPL087W VPS16Q03308 798 aa6.85□□□□□ -1.31
YDC1YPL087W YLR257WQ06146 321 aaKnown RBP6.85□□□□□ -1.31
YDC1YPL087W QNS1P38795 714 aaKnown RBP6.84□□□□□ -1.31
YDC1YPL087W ATG2P53855 1592 aa6.83□□□□□ -1.32
YDC1YPL087W CNN1P43618 361 aa6.83□□□□□ -1.32
YDC1YPL087W RCM1P53972 490 aa6.83□□□□□ -1.32
YDC1YPL087W TPP1Q03796 238 aa6.83□□□□□ -1.32
YDC1YPL087W SPO20Q04359 397 aa6.83□□□□□ -1.32
YDC1YPL087W MED7Q08278 222 aa6.83□□□□□ -1.32
YDC1YPL087W YPL260WQ08977 551 aa6.83□□□□□ -1.32
YDC1YPL087W ALG3P38179 458 aa6.82□□□□□ -1.32
YDC1YPL087W RGD1P38339 666 aa6.82□□□□□ -1.32
YDC1YPL087W HXT13P39924 564 aa6.82□□□□□ -1.32
YDC1YPL087W HXT17P53631 564 aa6.82□□□□□ -1.32
YDC1YPL087W HXT15P54854 567 aa6.82□□□□□ -1.32
YDC1YPL087W GDE1Q02979 1223 aa6.82□□□□□ -1.32
YDC1YPL087W PUS7Q08647 676 aaKnown RBP6.82□□□□□ -1.32
YDC1YPL087W DBP5P20449 482 aaKnown RBP6.81□□□□□ -1.32
YDC1YPL087W LYP1P32487 611 aa6.81□□□□□ -1.32
YDC1YPL087W WHI3P34761 661 aaKnown RBP6.81□□□□□ -1.32
YDC1YPL087W HNT2P49775 206 aa6.81□□□□□ -1.32
YDC1YPL087W AFG2P32794 780 aa6.8□□□□□ -1.32
YDC1YPL087W DUT1P33317 147 aa6.8□□□□□ -1.32
YDC1YPL087W RER2P35196 286 aa6.8□□□□□ -1.32
YDC1YPL087W TYW3P53177 273 aa6.8□□□□□ -1.32
YDC1YPL087W YGR053CP53234 283 aa6.8□□□□□ -1.32
YDC1YPL087W YGR130CP53278 816 aa6.8□□□□□ -1.32
YDC1YPL087W YCF1P39109 1515 aaKnown RBP6.8□□□□□ -1.32
YDC1YPL087W TAF2P23255 1407 aa6.79□□□□□ -1.32
YDC1YPL087W VAC8P39968 578 aa6.79□□□□□ -1.32
YDC1YPL087W RAT1Q02792 1006 aaKnown RBP6.79□□□□□ -1.32
YDC1YPL087W CYC7P00045 113 aa6.78□□□□□ -1.32
YDC1YPL087W TRP2P00899 507 aaKnown RBP6.78□□□□□ -1.32
YDC1YPL087W NBA1Q08229 501 aaKnown RBP6.78□□□□□ -1.32
YDC1YPL087W YVC1Q12324 675 aa6.78□□□□□ -1.32
YDC1YPL087W COQ4O13525 335 aa6.77□□□□□ -1.33
YDC1YPL087W KIP1P28742 1111 aa6.77□□□□□ -1.33
YDC1YPL087W MDL2P33311 773 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms