RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W CLU1Q03690 1277 aaKnown RBP5.82□□□□□ -1.48
BUD21YOR078W MSH3P25336 1018 aa5.81□□□□□ -1.48
BUD21YOR078W ERP5P38819 212 aa5.81□□□□□ -1.48
BUD21YOR078W YCS4Q06156 1176 aa5.81□□□□□ -1.48
BUD21YOR078W NUT2Q06213 157 aa5.81□□□□□ -1.48
BUD21YOR078W HRK1Q08732 759 aaKnown RBP5.81□□□□□ -1.48
BUD21YOR078W YJL045WP47052 634 aa5.8□□□□□ -1.48
BUD21YOR078W RLF2Q12495 606 aa5.8□□□□□ -1.48
BUD21YOR078W SRO9P25567 434 aaKnown RBP5.79□□□□□ -1.48
BUD21YOR078W CTS1P29029 562 aa5.79□□□□□ -1.48
BUD21YOR078W ABZ1P37254 787 aaPredicted RBP5.79□□□□□ -1.48
BUD21YOR078W SHM2P37291 469 aaKnown RBP5.79□□□□□ -1.48
BUD21YOR078W HSE1P38753 452 aa5.79□□□□□ -1.48
BUD21YOR078W SAM37P50110 327 aa5.79□□□□□ -1.48
BUD21YOR078W GSF2Q04697 403 aaKnown RBP5.79□□□□□ -1.48
BUD21YOR078W PRE10P21242 288 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
BUD21YOR078W UGA4P32837 571 aa5.78□□□□□ -1.48
BUD21YOR078W YNR063WP53749 607 aa5.78□□□□□ -1.48
BUD21YOR078W PEX13P80667 386 aa5.78□□□□□ -1.48
BUD21YOR078W YDR132CQ03900 495 aa5.78□□□□□ -1.48
BUD21YOR078W LAP2Q10740 671 aa5.77□□□□□ -1.49
BUD21YOR078W YBL113CQ7M4S9 792 aa5.77□□□□□ -1.49
BUD21YOR078W YLR358CO13565 187 aa5.76□□□□□ -1.49
BUD21YOR078W CIC1P38779 376 aaKnown RBP5.76□□□□□ -1.49
BUD21YOR078W QNS1P38795 714 aaKnown RBP5.76□□□□□ -1.49
BUD21YOR078W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49 RIP-Chip
BUD21YOR078W RSC58Q07979 502 aa5.76□□□□□ -1.49
BUD21YOR078W RCL1Q08096 367 aaPredicted RBP5.75□□□□□ -1.49
BUD21YOR078W VMA4P22203 233 aaKnown RBP5.74□□□□□ -1.49
BUD21YOR078W YSC84P32793 468 aa5.74□□□□□ -1.49
BUD21YOR078W PRP40P33203 583 aaKnown RBP5.74□□□□□ -1.49
BUD21YOR078W TUB2P02557 457 aaKnown RBP5.73□□□□□ -1.49
BUD21YOR078W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
BUD21YOR078W SPS1P08458 490 aa5.72□□□□□ -1.49
BUD21YOR078W CDC3P32457 520 aaKnown RBP5.72□□□□□ -1.49
BUD21YOR078W RDH54P38086 958 aa5.72□□□□□ -1.49
BUD21YOR078W RSM26P47141 266 aa5.72□□□□□ -1.49
BUD21YOR078W SPT20P50875 604 aa5.72□□□□□ -1.49
BUD21YOR078W ULP1Q02724 621 aa5.72□□□□□ -1.49
BUD21YOR078W SSA1P10591 642 aaKnown RBP5.71□□□□□ -1.5
BUD21YOR078W HEM13P11353 328 aaKnown RBP5.71□□□□□ -1.5
BUD21YOR078W ATG14P38270 344 aa5.71□□□□□ -1.5
BUD21YOR078W PEX28P38848 579 aa5.71□□□□□ -1.5
BUD21YOR078W LAM1P38851 1228 aa5.71□□□□□ -1.5
BUD21YOR078W MEF2P39677 819 aa5.71□□□□□ -1.5
BUD21YOR078W SGD1Q06132 899 aa5.71□□□□□ -1.5
BUD21YOR078W TAT2P38967 592 aa5.7□□□□□ -1.5
BUD21YOR078W GCN5Q03330 439 aa5.7□□□□□ -1.5
BUD21YOR078W RKM2Q03942 479 aa5.7□□□□□ -1.5
BUD21YOR078W NBA1Q08229 501 aaKnown RBP5.7□□□□□ -1.5
BUD21YOR078W SQT1P35184 431 aa5.69□□□□□ -1.5
BUD21YOR078W ADD66P36040 267 aa5.69□□□□□ -1.5
BUD21YOR078W MPT5P39016 859 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
BUD21YOR078W VPS53P47061 822 aa5.69□□□□□ -1.5
BUD21YOR078W ENV11P53246 860 aa5.69□□□□□ -1.5
BUD21YOR078W DAL4Q04895 635 aa5.69□□□□□ -1.5
BUD21YOR078W TOS4Q06266 489 aa5.69□□□□□ -1.5
BUD21YOR078W HAT1Q12341 374 aa5.69□□□□□ -1.5
BUD21YOR078W AFG2P32794 780 aa5.68□□□□□ -1.5
BUD21YOR078W YGL140CP53120 1219 aa5.68□□□□□ -1.5
BUD21YOR078W PNS1Q12412 539 aa5.68□□□□□ -1.5
BUD21YOR078W TAD3Q9URQ3 322 aa5.68□□□□□ -1.5
BUD21YOR078W CYC1P00044 109 aaPredicted RBP5.67□□□□□ -1.5
BUD21YOR078W PHO4P07270 312 aaKnown RBP5.67□□□□□ -1.5
BUD21YOR078W KIP1P28742 1111 aa5.67□□□□□ -1.5
BUD21YOR078W GPB2P39717 880 aa5.67□□□□□ -1.5
BUD21YOR078W YOR352WQ08816 343 aa5.67□□□□□ -1.5
BUD21YOR078W COQ4O13525 335 aa5.66□□□□□ -1.5
BUD21YOR078W KAR2P16474 682 aaKnown RBP5.66□□□□□ -1.5
BUD21YOR078W VPS35P34110 944 aa5.66□□□□□ -1.5
BUD21YOR078W BAP2P38084 609 aa5.66□□□□□ -1.5
BUD21YOR078W PLB2Q03674 706 aa5.66□□□□□ -1.5
BUD21YOR078W ROT1Q03691 256 aa5.66□□□□□ -1.5
BUD21YOR078W SPO21Q12411 609 aa5.66□□□□□ -1.5
BUD21YOR078W DUS4Q06063 367 aa5.65□□□□□ -1.5
BUD21YOR078W CCZ1P38273 704 aa5.64□□□□□ -1.51
BUD21YOR078W SEC26P41810 973 aaKnown RBP5.64□□□□□ -1.51
BUD21YOR078W EST2Q06163 884 aa5.64□□□□□ -1.51
BUD21YOR078W SNF5P18480 905 aa5.63□□□□□ -1.51
BUD21YOR078W YHL050CP38721 697 aa5.63□□□□□ -1.51
BUD21YOR078W YHR219WP38900 624 aa5.63□□□□□ -1.51
BUD21YOR078W HNT2P49775 206 aa5.63□□□□□ -1.51
BUD21YOR078W TNA1P53322 534 aa5.63□□□□□ -1.51
BUD21YOR078W HOS3Q02959 697 aaKnown RBP5.63□□□□□ -1.51
BUD21YOR078W SEC23P15303 768 aaKnown RBP5.62□□□□□ -1.51
BUD21YOR078W GCD6P32501 712 aaKnown RBP5.62□□□□□ -1.51
BUD21YOR078W DAK2P43550 591 aa5.62□□□□□ -1.51
BUD21YOR078W YPL109CQ02981 657 aa5.62□□□□□ -1.51
BUD21YOR078W ADI1Q03677 179 aa5.62□□□□□ -1.51
BUD21YOR078W PUS9Q12069 462 aa5.62□□□□□ -1.51
BUD21YOR078W PTC5Q12511 572 aa5.62□□□□□ -1.51
BUD21YOR078W PIK1P39104 1066 aa5.61□□□□□ -1.51
BUD21YOR078W SLI1P53304 468 aa5.61□□□□□ -1.51
BUD21YOR078W RSB1Q08417 382 aa5.61□□□□□ -1.51
BUD21YOR078W SRM1P21827 482 aa5.6□□□□□ -1.51
BUD21YOR078W PUF4P25339 888 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
BUD21YOR078W MET4P32389 672 aa5.6□□□□□ -1.51
BUD21YOR078W DOM34P33309 386 aa5.6□□□□□ -1.51
BUD21YOR078W TRM2P33753 639 aa5.6□□□□□ -1.51
BUD21YOR078W ALG3P38179 458 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms