RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	ALD6	P54115	500 aa	Known RBP	5.18	□□□□□ -1.58
TPM1	YNL079C	HXT15	P54854	567 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	EST2	Q06163	884 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	ALG6	Q12001	544 aa	Known RBP	5.18	□□□□□ -1.58
TPM1	YNL079C	YOR223W	Q12015	292 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	POL1	P13382	1468 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	ADD66	P36040	267 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	VAC8	P39968	578 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	ICP55	P40051	511 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	PRY1	P47032	299 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	NCE103	P53615	221 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	YMR187C	Q03236	431 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	TMA46	Q12000	345 aa	Known RBP	5.17	□□□□□ -1.58
TPM1	YNL079C	YDR215C	Q12240	137 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	PHM7	Q12252	991 aa		5.17	□□□□□ -1.58
TPM1	YNL079C	SCC2	Q04002	1493 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	YCK2	P23292	546 aa	Known RBP	5.16	□□□□□ -1.58
TPM1	YNL079C	RAD27	P26793	382 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	SLN1	P39928	1220 aa	Predicted RBP	5.16	□□□□□ -1.58
TPM1	YNL079C	SPO74	P45819	413 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	ENT3	P47160	408 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	FAA4	P47912	694 aa	Known RBP	5.16	□□□□□ -1.58
TPM1	YNL079C	YGR045C	P53229	120 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	YGR053C	P53234	283 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	CWC24	P53769	259 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	ROD1	Q02805	837 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	GDE1	Q02979	1223 aa		5.16	□□□□□ -1.58
TPM1	YNL079C	STU1	P38198	1513 aa		5.15	□□□□□ -1.58
TPM1	YNL079C	DED1	P06634	604 aa	Known RBP	5.15	□□□□□ -1.59
TPM1	YNL079C	RSC6	P25632	483 aa		5.15	□□□□□ -1.59
TPM1	YNL079C	EEB1	Q02891	456 aa		5.15	□□□□□ -1.59
TPM1	YNL079C	RKM2	Q03942	479 aa		5.15	□□□□□ -1.59
TPM1	YNL079C	DOT1	Q04089	582 aa	Known RBP	5.15	□□□□□ -1.59
TPM1	YNL079C	AVO1	Q08236	1176 aa		5.15	□□□□□ -1.59
TPM1	YNL079C	YPR053C	Q6Q5F3	151 aa		5.15	□□□□□ -1.59
TPM1	YNL079C	CHD1	P32657	1468 aa		5.14	□□□□□ -1.59
TPM1	YNL079C	MKK2	P32491	506 aa		5.14	□□□□□ -1.59
TPM1	YNL079C	RER2	P35196	286 aa		5.14	□□□□□ -1.59
TPM1	YNL079C	SKN7	P38889	622 aa		5.14	□□□□□ -1.59
TPM1	YNL079C	YAR028W	P39548	234 aa		5.14	□□□□□ -1.59
TPM1	YNL079C	ARI1	P53111	347 aa	Known RBP	5.14	□□□□□ -1.59
TPM1	YNL079C	YNR063W	P53749	607 aa		5.14	□□□□□ -1.59
TPM1	YNL079C	RPO31	P04051	1460 aa		5.13	□□□□□ -1.59
TPM1	YNL079C	AFG2	P32794	780 aa		5.13	□□□□□ -1.59
TPM1	YNL079C	ATG14	P38270	344 aa		5.13	□□□□□ -1.59
TPM1	YNL079C	ELA1	P53861	379 aa	Predicted RBP	5.13	□□□□□ -1.59
TPM1	YNL079C	GPT2	P36148	743 aa		5.12	□□□□□ -1.59
TPM1	YNL079C	TAT1	P38085	619 aa		5.12	□□□□□ -1.59
TPM1	YNL079C	RAT1	Q02792	1006 aa	Known RBP	5.12	□□□□□ -1.59
TPM1	YNL079C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
TPM1	YNL079C	LAP2	Q10740	671 aa		5.12	□□□□□ -1.59
TPM1	YNL079C	MMS22	Q06164	1454 aa		5.12	□□□□□ -1.59
TPM1	YNL079C	SYP1	P25623	870 aa	Known RBP	5.11	□□□□□ -1.59
TPM1	YNL079C	LYP1	P32487	611 aa		5.11	□□□□□ -1.59
TPM1	YNL079C	MSH4	P40965	878 aa	Predicted RBP	5.11	□□□□□ -1.59
TPM1	YNL079C	PUS1	Q12211	544 aa	Known RBP	5.11	□□□□□ -1.59
TPM1	YNL079C	YTA7	P40340	1379 aa		5.11	□□□□□ -1.59
TPM1	YNL079C	YOR1	P53049	1477 aa		5.11	□□□□□ -1.59
TPM1	YNL079C	RKR1	Q04781	1562 aa		5.11	□□□□□ -1.59
TPM1	YNL079C	TRP2	P00899	507 aa	Known RBP	5.1	□□□□□ -1.59
TPM1	YNL079C	RET1	P22276	1149 aa	Known RBP	5.1	□□□□□ -1.59
TPM1	YNL079C	UFD4	P33202	1483 aa		5.1	□□□□□ -1.59
TPM1	YNL079C	NNK1	P36003	928 aa		5.1	□□□□□ -1.59
TPM1	YNL079C	HSE1	P38753	452 aa		5.1	□□□□□ -1.59
TPM1	YNL079C	TYW3	P53177	273 aa		5.1	□□□□□ -1.59
TPM1	YNL079C	GIC2	Q06648	383 aa		5.1	□□□□□ -1.59
TPM1	YNL079C	OPI10	Q08202	246 aa		5.1	□□□□□ -1.59
TPM1	YNL079C	SSF2	Q12153	453 aa	Predicted RBP	5.1	□□□□□ -1.59
TPM1	YNL079C	TOP2	P06786	1428 aa	Known RBP	5.09	□□□□□ -1.59
TPM1	YNL079C	SMY2	P32909	740 aa	Known RBP	5.09	□□□□□ -1.59
TPM1	YNL079C	ALG3	P38179	458 aa		5.09	□□□□□ -1.59
TPM1	YNL079C	QNS1	P38795	714 aa	Known RBP	5.09	□□□□□ -1.59
TPM1	YNL079C	CNN1	P43618	361 aa		5.09	□□□□□ -1.59
TPM1	YNL079C	VPS53	P47061	822 aa		5.09	□□□□□ -1.59
TPM1	YNL079C	ALT1	P52893	592 aa		5.09	□□□□□ -1.59
TPM1	YNL079C	TIF35	Q04067	274 aa	Known RBP	5.09	□□□□□ -1.59
TPM1	YNL079C	RSA3	Q05942	220 aa	Known RBP	5.09	□□□□□ -1.59
TPM1	YNL079C	MCA1	Q08601	432 aa		5.09	□□□□□ -1.59
TPM1	YNL079C	WRS1	Q12109	432 aa	Known RBP	5.09	□□□□□ -1.59
TPM1	YNL079C	PTC5	Q12511	572 aa		5.09	□□□□□ -1.59
TPM1	YNL079C	BPT1	P14772	1559 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	YCF1	P39109	1515 aa	Known RBP	5.08	□□□□□ -1.6
TPM1	YNL079C	DBP5	P20449	482 aa	Known RBP	5.08	□□□□□ -1.6
TPM1	YNL079C	PRI2	P20457	528 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	NFS1	P25374	497 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	NAM7	P30771	971 aa	Known RBP	5.08	□□□□□ -1.6
TPM1	YNL079C	PGM1	P33401	570 aa	Known RBP	5.08	□□□□□ -1.6
TPM1	YNL079C	AKR1	P39010	764 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	NNF1	P47149	201 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	YPL034W	Q03083	165 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	SPO20	Q04359	397 aa		5.08	□□□□□ -1.6
TPM1	YNL079C	YLR257W	Q06146	321 aa	Known RBP	5.08	□□□□□ -1.6
TPM1	YNL079C	FAL1	Q12099	399 aa	Known RBP	5.08	□□□□□ -1.6
TPM1	YNL079C	SMC4	Q12267	1418 aa		5.07	□□□□□ -1.6
TPM1	YNL079C	RPS4A	P0CX35	261 aa	Known RBP	5.07	□□□□□ -1.6
TPM1	YNL079C	RPS4B	P0CX36	261 aa	Known RBP	5.07	□□□□□ -1.6
TPM1	YNL079C	BAS1	P22035	811 aa		5.07	□□□□□ -1.6
TPM1	YNL079C	YKL069W	P36088	180 aa		5.07	□□□□□ -1.6
TPM1	YNL079C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
TPM1	YNL079C	MYO4	P32492	1471 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms