RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C MCM5P29496 775 aaKnown RBP3.93□□□□□ -1.78
SSN8YNL025C EXO5P38289 585 aa3.93□□□□□ -1.78
SSN8YNL025C MDG1P53885 366 aa3.93□□□□□ -1.78
SSN8YNL025C YCS4Q06156 1176 aa3.93□□□□□ -1.78
SSN8YNL025C UBX5Q06682 500 aa3.93□□□□□ -1.78
SSN8YNL025C CDA2Q06703 312 aa3.93□□□□□ -1.78
SSN8YNL025C NOC3Q07896 663 aaPredicted RBP3.93□□□□□ -1.78
SSN8YNL025C INP54Q08227 384 aaKnown RBP3.93□□□□□ -1.78
SSN8YNL025C ALG6Q12001 544 aaKnown RBP3.93□□□□□ -1.78
SSN8YNL025C TY1A-GR1Q12085 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.93□□□□□ -1.78
SSN8YNL025C TY1A-OLQ92392 440 aaKnown RBP3.93□□□□□ -1.78
SSN8YNL025C PPG1P32838 368 aa3.92□□□□□ -1.78
SSN8YNL025C CIC1P38779 376 aaKnown RBP3.92□□□□□ -1.78
SSN8YNL025C ERP5P38819 212 aa3.92□□□□□ -1.78
SSN8YNL025C TPO2P53283 614 aa3.92□□□□□ -1.78
SSN8YNL025C EAR1Q03212 550 aa3.92□□□□□ -1.78
SSN8YNL025C SSY1Q03770 852 aa3.92□□□□□ -1.78
SSN8YNL025C GPI13Q07830 1017 aa3.92□□□□□ -1.78
SSN8YNL025C LPX1Q12405 387 aaKnown RBP3.92□□□□□ -1.78
SSN8YNL025C GRS1P38088 690 aaKnown RBP3.91□□□□□ -1.78
SSN8YNL025C RNH70P53331 553 aa3.91□□□□□ -1.78
SSN8YNL025C ELA1P53861 379 aaPredicted RBP3.91□□□□□ -1.78
SSN8YNL025C NUT2Q06213 157 aa3.91□□□□□ -1.78
SSN8YNL025C HDA2Q06629 674 aa3.91□□□□□ -1.78
SSN8YNL025C BUD21Q08492 214 aaPredicted RBP3.91□□□□□ -1.78
SSN8YNL025C PUS7Q08647 676 aaKnown RBP3.91□□□□□ -1.78
SSN8YNL025C YBL113CQ7M4S9 792 aa3.91□□□□□ -1.78
SSN8YNL025C FRT1Q99332 602 aa3.91□□□□□ -1.78
SSN8YNL025C NEM1P38757 446 aa3.9□□□□□ -1.79
SSN8YNL025C YOL098CQ12496 1037 aa3.9□□□□□ -1.79
SSN8YNL025C PRP6P19735 899 aaPredicted RBP3.89□□□□□ -1.79
SSN8YNL025C VMA4P22203 233 aaKnown RBP3.89□□□□□ -1.79
SSN8YNL025C PRO1P32264 428 aa3.89□□□□□ -1.79
SSN8YNL025C THI80P35202 319 aa3.89□□□□□ -1.79
SSN8YNL025C HSE1P38753 452 aa3.89□□□□□ -1.79
SSN8YNL025C IPL1P38991 367 aa3.89□□□□□ -1.79
SSN8YNL025C YAR028WP39548 234 aa3.89□□□□□ -1.79
SSN8YNL025C MTR4P47047 1073 aaKnown RBP3.89□□□□□ -1.79
SSN8YNL025C MON1P53129 644 aa3.89□□□□□ -1.79
SSN8YNL025C YGL081WP53156 320 aa3.89□□□□□ -1.79
SSN8YNL025C MSC6Q08818 692 aaKnown RBP3.89□□□□□ -1.79
SSN8YNL025C TSR4P25040 408 aa3.88□□□□□ -1.79
SSN8YNL025C GCD6P32501 712 aaKnown RBP3.88□□□□□ -1.79
SSN8YNL025C VPS35P34110 944 aa3.88□□□□□ -1.79
SSN8YNL025C SLS1P42900 643 aa3.88□□□□□ -1.79
SSN8YNL025C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SSN8YNL025C ZDS1P50111 915 aaKnown RBP3.88□□□□□ -1.79
SSN8YNL025C TPP1Q03796 238 aa3.88□□□□□ -1.79
SSN8YNL025C UTP5Q04177 643 aaKnown RBP3.88□□□□□ -1.79
SSN8YNL025C HRK1Q08732 759 aaKnown RBP3.88□□□□□ -1.79
SSN8YNL025C LAP2Q10740 671 aa3.88□□□□□ -1.79
SSN8YNL025C SSB1P11484 613 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C SAM35P14693 329 aa3.87□□□□□ -1.79
SSN8YNL025C KAR2P16474 682 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C RET1P22276 1149 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C SRO9P25567 434 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C SRP40P32583 406 aaPredicted RBP3.87□□□□□ -1.79
SSN8YNL025C MDL2P33311 773 aa3.87□□□□□ -1.79
SSN8YNL025C MFT1P33441 392 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C PTC7P38797 343 aa3.87□□□□□ -1.79
SSN8YNL025C SSB2P40150 613 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C RPT2P40327 437 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C KRI1P42846 591 aaKnown RBP3.87□□□□□ -1.79
SSN8YNL025C POL32P47110 350 aa3.87□□□□□ -1.79
SSN8YNL025C RKM2Q03942 479 aa3.87□□□□□ -1.79
SSN8YNL025C MSH3P25336 1018 aa3.86□□□□□ -1.79
SSN8YNL025C TOA1P32773 286 aa3.86□□□□□ -1.79
SSN8YNL025C MGE1P38523 228 aa3.86□□□□□ -1.79
SSN8YNL025C TPM2P40414 161 aa3.86□□□□□ -1.79
SSN8YNL025C TY4A-JP47023 414 aa3.86□□□□□ -1.79
SSN8YNL025C RIM8P53179 542 aa3.86□□□□□ -1.79
SSN8YNL025C ENV11P53246 860 aa3.86□□□□□ -1.79
SSN8YNL025C POB3Q04636 552 aaKnown RBP3.86□□□□□ -1.79
SSN8YNL025C YLR257WQ06146 321 aaKnown RBP3.86□□□□□ -1.79
SSN8YNL025C TAD3Q9URQ3 322 aa3.86□□□□□ -1.79
SSN8YNL025C PHO4P07270 312 aaKnown RBP3.85□□□□□ -1.79
SSN8YNL025C PRP40P33203 583 aaKnown RBP3.85□□□□□ -1.79
SSN8YNL025C RDH54P38086 958 aa3.85□□□□□ -1.79
SSN8YNL025C YHL012WP38709 493 aa3.85□□□□□ -1.79
SSN8YNL025C GTS1P40956 396 aa3.85□□□□□ -1.79
SSN8YNL025C RPS0BP46654 252 aaKnown RBP3.85□□□□□ -1.79
SSN8YNL025C MRPL22P53881 309 aa3.85□□□□□ -1.79
SSN8YNL025C TMA64Q04600 565 aaKnown RBP3.85□□□□□ -1.79
SSN8YNL025C RSA3Q05942 220 aaKnown RBP3.85□□□□□ -1.79
SSN8YNL025C SOD2P00447 233 aa3.84□□□□□ -1.79
SSN8YNL025C DPB3P27344 201 aa3.84□□□□□ -1.79
SSN8YNL025C FLR1P38124 548 aa3.84□□□□□ -1.79
SSN8YNL025C PPX1P38698 397 aa3.84□□□□□ -1.79
SSN8YNL025C YHL050CP38721 697 aa3.84□□□□□ -1.79
SSN8YNL025C YHR219WP38900 624 aa3.84□□□□□ -1.79
SSN8YNL025C XKS1P42826 600 aa3.84□□□□□ -1.79
SSN8YNL025C YJL049WP47048 450 aa3.84□□□□□ -1.79
SSN8YNL025C VPS53P47061 822 aa3.84□□□□□ -1.79
SSN8YNL025C FOL2P51601 243 aaKnown RBP3.84□□□□□ -1.79
SSN8YNL025C CEF1Q03654 590 aaPredicted RBP3.84□□□□□ -1.79
SSN8YNL025C UTP14Q04500 899 aaKnown RBP3.84□□□□□ -1.79
SSN8YNL025C JIP5Q06214 492 aaPredicted RBP3.84□□□□□ -1.79
SSN8YNL025C YDL177CQ12257 170 aa3.84□□□□□ -1.79
SSN8YNL025C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms