RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W HSE1P38753 452 aa5.22□□□□□ -1.57
ABF1YKL112W YER034WP40022 185 aaKnown RBP5.22□□□□□ -1.57
ABF1YKL112W ACF4P47129 309 aa5.22□□□□□ -1.57
ABF1YKL112W HOL1P53389 586 aa5.22□□□□□ -1.57
ABF1YKL112W JJJ1P53863 590 aa5.22□□□□□ -1.57
ABF1YKL112W YNL050CP53952 270 aa5.22□□□□□ -1.57
ABF1YKL112W COG8Q04632 607 aa5.22□□□□□ -1.57
ABF1YKL112W ARR1Q06596 294 aa5.22□□□□□ -1.57
ABF1YKL112W CAF20P12962 161 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W MRPL25P23369 157 aa5.21□□□□□ -1.58
ABF1YKL112W SRP40P32583 406 aaPredicted RBP5.21□□□□□ -1.58
ABF1YKL112W ECM32P32644 1121 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W YAP1801P38856 637 aa5.21□□□□□ -1.58
ABF1YKL112W VPS41P38959 992 aa5.21□□□□□ -1.58
ABF1YKL112W IOC3P43596 787 aa5.21□□□□□ -1.58
ABF1YKL112W DSL1P53847 754 aa5.21□□□□□ -1.58
ABF1YKL112W PNG1Q02890 363 aa5.21□□□□□ -1.58
ABF1YKL112W SPP382Q06411 708 aaPredicted RBP5.21□□□□□ -1.58
ABF1YKL112W TFB4Q12004 338 aa5.21□□□□□ -1.58
ABF1YKL112W HPR1P17629 752 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W HNM1P19807 563 aa5.21□□□□□ -1.58
ABF1YKL112W PKC1P24583 1151 aa5.21□□□□□ -1.58
ABF1YKL112W YDJ1P25491 409 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W TTI1P36097 1038 aa5.21□□□□□ -1.58
ABF1YKL112W RTT105P40063 208 aa5.21□□□□□ -1.58
ABF1YKL112W YJL007CP47080 104 aa5.21□□□□□ -1.58
ABF1YKL112W YGR021WP53212 290 aa5.21□□□□□ -1.58
ABF1YKL112W HST2P53686 357 aa5.21□□□□□ -1.58
ABF1YKL112W VMS1Q04311 632 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W UTP4Q06679 776 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W VIP1Q06685 1146 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W NOB1Q08444 459 aaKnown RBP5.21□□□□□ -1.58
ABF1YKL112W MPC54Q08550 464 aa5.21□□□□□ -1.58
ABF1YKL112W HMI1Q12039 706 aa5.21□□□□□ -1.58
ABF1YKL112W DPH6Q12429 685 aa5.21□□□□□ -1.58
ABF1YKL112W AI2P03876 854 aa5.2□□□□□ -1.58
ABF1YKL112W HMG1P12683 1054 aa5.2□□□□□ -1.58
ABF1YKL112W PHO84P25297 587 aaKnown RBP5.2□□□□□ -1.58
ABF1YKL112W ACP1P32463 125 aa5.2□□□□□ -1.58
ABF1YKL112W ATG32P40458 529 aa5.2□□□□□ -1.58
ABF1YKL112W IRR1P40541 1150 aa5.2□□□□□ -1.58
ABF1YKL112W RSC1P53236 928 aa5.2□□□□□ -1.58
ABF1YKL112W ATF2P53296 535 aa5.2□□□□□ -1.58
ABF1YKL112W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
ABF1YKL112W HEH2Q03281 663 aa5.2□□□□□ -1.58
ABF1YKL112W TPM1P17536 199 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W SWC3P31376 625 aa5.19□□□□□ -1.58
ABF1YKL112W VPH1P32563 840 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W MRE11P32829 692 aa5.19□□□□□ -1.58
ABF1YKL112W YJR142WP47173 342 aa5.19□□□□□ -1.58
ABF1YKL112W DSD1P53095 428 aa5.19□□□□□ -1.58
ABF1YKL112W ATG1P53104 897 aa5.19□□□□□ -1.58
ABF1YKL112W HUL5P53119 910 aa5.19□□□□□ -1.58
ABF1YKL112W ARR2Q06597 130 aa5.19□□□□□ -1.58
ABF1YKL112W CSR1Q06705 408 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W SSP2Q08646 371 aa5.19□□□□□ -1.58
ABF1YKL112W YPL191CQ08930 360 aa5.19□□□□□ -1.58
ABF1YKL112W LSO1Q3E827 93 aa5.19□□□□□ -1.58
ABF1YKL112W TUF1P02992 437 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W SWI6P09959 803 aa5.19□□□□□ -1.58
ABF1YKL112W KEX2P13134 814 aa5.19□□□□□ -1.58
ABF1YKL112W RPB4P20433 221 aaPredicted RBP5.19□□□□□ -1.58
ABF1YKL112W DIT2P21595 489 aa5.19□□□□□ -1.58
ABF1YKL112W YKL091CP33324 310 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W STO1P34160 861 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W OTU2P38747 307 aaKnown RBP5.19□□□□□ -1.58
ABF1YKL112W PNT1P38969 423 aa5.19□□□□□ -1.58
ABF1YKL112W CAJ1P39101 391 aa5.19□□□□□ -1.58
ABF1YKL112W SDS3P40505 327 aa5.19□□□□□ -1.58
ABF1YKL112W ATG16Q03818 150 aa5.19□□□□□ -1.58
ABF1YKL112W SAS4Q04003 481 aa5.19□□□□□ -1.58
ABF1YKL112W BRR1Q99177 341 aaPredicted RBP5.19□□□□□ -1.58
ABF1YKL112W INH1P01097 85 aa5.18□□□□□ -1.58
ABF1YKL112W KAR3P17119 729 aa5.18□□□□□ -1.58
ABF1YKL112W SPT5P27692 1063 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W HSP104P31539 908 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W FRD1P32614 470 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W UBP9P39967 754 aa5.18□□□□□ -1.58
ABF1YKL112W YEN1P40028 759 aa5.18□□□□□ -1.58
ABF1YKL112W RIC1P40395 1056 aa5.18□□□□□ -1.58
ABF1YKL112W RPL34BP40525 121 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W GCD10P41814 478 aa5.18□□□□□ -1.58
ABF1YKL112W BBC1P47068 1157 aa5.18□□□□□ -1.58
ABF1YKL112W SNZ1Q03148 297 aa5.18□□□□□ -1.58
ABF1YKL112W YLR225CQ05948 407 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W MRD1Q06106 887 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W DBP9Q06218 594 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W NDL1Q06568 189 aa5.18□□□□□ -1.58
ABF1YKL112W YOR378WQ08902 515 aa5.18□□□□□ -1.58
ABF1YKL112W RRI2Q12348 645 aa5.18□□□□□ -1.58
ABF1YKL112W YMR084WA2P2R3 262 aa5.18□□□□□ -1.58
ABF1YKL112W SPS1P08458 490 aa5.18□□□□□ -1.58
ABF1YKL112W ATE1P16639 503 aa5.18□□□□□ -1.58
ABF1YKL112W URA1P28272 314 aaPredicted RBP5.18□□□□□ -1.58
ABF1YKL112W COY1P34237 679 aa5.18□□□□□ -1.58
ABF1YKL112W UBP14P38237 781 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W BFR1P38934 470 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
ABF1YKL112W YTA6P40328 754 aa5.18□□□□□ -1.58
ABF1YKL112W NUP42P49686 430 aaKnown RBP5.18□□□□□ -1.58
ABF1YKL112W PAP2P53632 584 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms