RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W PGM1P33401 570 aaKnown RBP5.35□□□□□ -1.55
MSN4YKL062W XKS1P42826 600 aa5.35□□□□□ -1.55
MSN4YKL062W YGR045CP53229 120 aa5.35□□□□□ -1.55
MSN4YKL062W GIC2Q06648 383 aa5.35□□□□□ -1.55
MSN4YKL062W COQ2P32378 372 aa5.34□□□□□ -1.55
MSN4YKL062W ATG14P38270 344 aa5.34□□□□□ -1.55
MSN4YKL062W AKR1P39010 764 aa5.34□□□□□ -1.55
MSN4YKL062W SPO74P45819 413 aa5.34□□□□□ -1.55
MSN4YKL062W FPR4Q06205 392 aaPredicted RBP5.34□□□□□ -1.55
MSN4YKL062W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
MSN4YKL062W TAF13P11747 167 aa5.34□□□□□ -1.55
MSN4YKL062W SAF1P38352 637 aa5.34□□□□□ -1.55
MSN4YKL062W NMD2P38798 1089 aaKnown RBP5.34□□□□□ -1.55
MSN4YKL062W ELA1P53861 379 aaPredicted RBP5.34□□□□□ -1.55
MSN4YKL062W GCR1P07261 785 aa5.33□□□□□ -1.56
MSN4YKL062W ADD66P36040 267 aa5.33□□□□□ -1.56
MSN4YKL062W SVF1Q05515 481 aa5.33□□□□□ -1.56
MSN4YKL062W UBX5Q06682 500 aa5.33□□□□□ -1.56
MSN4YKL062W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
MSN4YKL062W YAR028WP39548 234 aa5.32□□□□□ -1.56
MSN4YKL062W MSH4P40965 878 aaPredicted RBP5.32□□□□□ -1.56
MSN4YKL062W YNR063WP53749 607 aa5.32□□□□□ -1.56
MSN4YKL062W EST2Q06163 884 aa5.32□□□□□ -1.56
MSN4YKL062W HDA2Q06629 674 aa5.32□□□□□ -1.56
MSN4YKL062W LAP2Q10740 671 aa5.32□□□□□ -1.56
MSN4YKL062W PET112P33893 541 aa5.32□□□□□ -1.56
MSN4YKL062W MRL1Q06815 381 aa5.32□□□□□ -1.56
MSN4YKL062W CHS2P14180 963 aa5.31□□□□□ -1.56
MSN4YKL062W NNK1P36003 928 aa5.31□□□□□ -1.56
MSN4YKL062W RKM2Q03942 479 aa5.31□□□□□ -1.56
MSN4YKL062W GLT1Q12680 2145 aaKnown RBP5.31□□□□□ -1.56
MSN4YKL062W DED1P06634 604 aaKnown RBP5.3□□□□□ -1.56
MSN4YKL062W KAE1P36132 386 aa5.3□□□□□ -1.56
MSN4YKL062W HSE1P38753 452 aa5.3□□□□□ -1.56
MSN4YKL062W NNF1P47149 201 aa5.3□□□□□ -1.56
MSN4YKL062W RNH70P53331 553 aa5.3□□□□□ -1.56
MSN4YKL062W YLR122CQ12312 125 aa5.3□□□□□ -1.56
MSN4YKL062W RPS4AP0CX35 261 aaKnown RBP5.3□□□□□ -1.56
MSN4YKL062W RPS4BP0CX36 261 aaKnown RBP5.3□□□□□ -1.56
MSN4YKL062W NFS1P25374 497 aa5.3□□□□□ -1.56
MSN4YKL062W SMY2P32909 740 aaKnown RBP5.3□□□□□ -1.56
MSN4YKL062W TOM20P35180 183 aa5.3□□□□□ -1.56
MSN4YKL062W MNR2P35724 969 aa5.3□□□□□ -1.56
MSN4YKL062W KRI1P42846 591 aaKnown RBP5.3□□□□□ -1.56
MSN4YKL062W SIW14P53965 281 aa5.3□□□□□ -1.56
MSN4YKL062W RTT10Q08924 1013 aa5.3□□□□□ -1.56
MSN4YKL062W RET1P22276 1149 aaKnown RBP5.29□□□□□ -1.56
MSN4YKL062W MMM1P41800 426 aa5.29□□□□□ -1.56
MSN4YKL062W GNP1P48813 663 aa5.29□□□□□ -1.56
MSN4YKL062W ALT1P52893 592 aa5.29□□□□□ -1.56
MSN4YKL062W ROD1Q02805 837 aa5.29□□□□□ -1.56
MSN4YKL062W JIP5Q06214 492 aaPredicted RBP5.29□□□□□ -1.56
MSN4YKL062W SBP1P10080 294 aaKnown RBP5.28□□□□□ -1.56
MSN4YKL062W RAD27P26793 382 aa5.28□□□□□ -1.56
MSN4YKL062W ENT3P47160 408 aa5.28□□□□□ -1.56
MSN4YKL062W MSB1P21339 1137 aaKnown RBP5.28□□□□□ -1.56
MSN4YKL062W HXT13P39924 564 aa5.28□□□□□ -1.56
MSN4YKL062W HXT17P53631 564 aa5.28□□□□□ -1.56
MSN4YKL062W HXT15P54854 567 aa5.28□□□□□ -1.56
MSN4YKL062W CDC34P14682 295 aa5.27□□□□□ -1.57
MSN4YKL062W WHI3P34761 661 aaKnown RBP5.27□□□□□ -1.57
MSN4YKL062W CIT3P43635 486 aa5.27□□□□□ -1.57
MSN4YKL062W VPS53P47061 822 aa5.27□□□□□ -1.57
MSN4YKL062W ZDS1P50111 915 aaKnown RBP5.27□□□□□ -1.57
MSN4YKL062W YGR130CP53278 816 aa5.27□□□□□ -1.57
MSN4YKL062W RSA3Q05942 220 aaKnown RBP5.27□□□□□ -1.57
MSN4YKL062W CLN2P20438 545 aa5.26□□□□□ -1.57
MSN4YKL062W MKK2P32491 506 aa5.26□□□□□ -1.57
MSN4YKL062W AFG2P32794 780 aa5.26□□□□□ -1.57
MSN4YKL062W QNS1P38795 714 aaKnown RBP5.26□□□□□ -1.57
MSN4YKL062W MAD1P40957 749 aa5.26□□□□□ -1.57
MSN4YKL062W EAR1Q03212 550 aa5.26□□□□□ -1.57
MSN4YKL062W YLR257WQ06146 321 aaKnown RBP5.26□□□□□ -1.57
MSN4YKL062W YOR059CQ08448 450 aaKnown RBP5.26□□□□□ -1.57
MSN4YKL062W TMA46Q12000 345 aaKnown RBP5.26□□□□□ -1.57
MSN4YKL062W DUT1P33317 147 aa5.26□□□□□ -1.57
MSN4YKL062W PTC5Q12511 572 aa5.26□□□□□ -1.57
MSN4YKL062W ALG3P38179 458 aa5.25□□□□□ -1.57
MSN4YKL062W NMD3P38861 518 aaKnown RBP5.25□□□□□ -1.57
MSN4YKL062W NAB3P38996 802 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
MSN4YKL062W RCM1P53972 490 aa5.25□□□□□ -1.57
MSN4YKL062W RAT1Q02792 1006 aaKnown RBP5.25□□□□□ -1.57
MSN4YKL062W TPP1Q03796 238 aa5.25□□□□□ -1.57
MSN4YKL062W PIN2Q12057 282 aa5.25□□□□□ -1.57
MSN4YKL062W TRP3P00937 484 aa5.24□□□□□ -1.57
MSN4YKL062W TSR4P25040 408 aa5.24□□□□□ -1.57
MSN4YKL062W RER2P35196 286 aa5.24□□□□□ -1.57
MSN4YKL062W PMC1P38929 1173 aaPredicted RBP5.24□□□□□ -1.57
MSN4YKL062W YFR016CP43597 1233 aaKnown RBP5.24□□□□□ -1.57
MSN4YKL062W VPS16Q03308 798 aa5.24□□□□□ -1.57
MSN4YKL062W MED7Q08278 222 aa5.24□□□□□ -1.57
MSN4YKL062W PUS7Q08647 676 aaKnown RBP5.24□□□□□ -1.57
MSN4YKL062W YOL098CQ12496 1037 aa5.24□□□□□ -1.57
MSN4YKL062W SYP1P25623 870 aaKnown RBP5.24□□□□□ -1.57
MSN4YKL062W HRK1Q08732 759 aaKnown RBP5.24□□□□□ -1.57
MSN4YKL062W CYC7P00045 113 aa5.23□□□□□ -1.57
MSN4YKL062W CWC24P53769 259 aa5.23□□□□□ -1.57
MSN4YKL062W ALO1P54783 526 aaKnown RBP5.23□□□□□ -1.57
MSN4YKL062W MAG2Q06436 670 aaKnown RBP5.23□□□□□ -1.57
MSN4YKL062W YVC1Q12324 675 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms