RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	YGR045C	P53229	120 aa		3.5	□□□□□ -1.85
NUP82	YJL061W	NNK1	P36003	928 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	GPT2	P36148	743 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	YNR063W	P53749	607 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	ELA1	P53861	379 aa	Predicted RBP	3.49	□□□□□ -1.85
NUP82	YJL061W	ROD1	Q02805	837 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	COQ2	P32378	372 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	SMY2	P32909	740 aa	Known RBP	3.49	□□□□□ -1.85
NUP82	YJL061W	DUT1	P33317	147 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	HXT13	P39924	564 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	VAC8	P39968	578 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	KRI1	P42846	591 aa	Known RBP	3.49	□□□□□ -1.85
NUP82	YJL061W	VPS53	P47061	822 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	HXT17	P53631	564 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	ALD6	P54115	500 aa	Known RBP	3.49	□□□□□ -1.85
NUP82	YJL061W	HXT15	P54854	567 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	GDE1	Q02979	1223 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	MAG2	Q06436	670 aa	Known RBP	3.49	□□□□□ -1.85
NUP82	YJL061W	GIC2	Q06648	383 aa		3.49	□□□□□ -1.85
NUP82	YJL061W	MKK2	P32491	506 aa		3.48	□□□□□ -1.85
NUP82	YJL061W	MSH4	P40965	878 aa	Predicted RBP	3.48	□□□□□ -1.85
NUP82	YJL061W	NFS1	P25374	497 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	AKR1	P39010	764 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	FAA4	P47912	694 aa	Known RBP	3.47	□□□□□ -1.85
NUP82	YJL061W	YGR053C	P53234	283 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	YPL034W	Q03083	165 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	RSA3	Q05942	220 aa	Known RBP	3.47	□□□□□ -1.85
NUP82	YJL061W	HRK1	Q08732	759 aa	Known RBP	3.47	□□□□□ -1.85
NUP82	YJL061W	SYP1	P25623	870 aa	Known RBP	3.47	□□□□□ -1.85
NUP82	YJL061W	LYP1	P32487	611 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	RER2	P35196	286 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	SAF1	P38352	637 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	SPO20	Q04359	397 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	MCA1	Q08601	432 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	PTC5	Q12511	572 aa		3.47	□□□□□ -1.85
NUP82	YJL061W	RPS4A	P0CX35	261 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	RPS4B	P0CX36	261 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	DBP5	P20449	482 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	RET1	P22276	1149 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	AFG2	P32794	780 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	PGM1	P33401	570 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	ALG3	P38179	458 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	QNS1	P38795	714 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	CNN1	P43618	361 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	ALT1	P52893	592 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	RAT1	Q02792	1006 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	EEB1	Q02891	456 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	YLR257W	Q06146	321 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
NUP82	YJL061W	TRP2	P00899	507 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	NAM7	P30771	971 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	RGD1	P38339	666 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	MMM1	P41800	426 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	CCT8	P47079	568 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	TYW3	P53177	273 aa		3.46	□□□□□ -1.86
NUP82	YJL061W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
NUP82	YJL061W	YOR059C	Q08448	450 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	FAL1	Q12099	399 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	WRS1	Q12109	432 aa	Known RBP	3.46	□□□□□ -1.86
NUP82	YJL061W	CHS2	P14180	963 aa		3.45	□□□□□ -1.86
NUP82	YJL061W	SNF7	P39929	240 aa	Known RBP	3.45	□□□□□ -1.86
NUP82	YJL061W	CIT3	P43635	486 aa		3.45	□□□□□ -1.86
NUP82	YJL061W	HNT2	P49775	206 aa		3.45	□□□□□ -1.86
NUP82	YJL061W	YPL260W	Q08977	551 aa		3.45	□□□□□ -1.86
NUP82	YJL061W	KAE1	P36132	386 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	TPP1	Q03796	238 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	MTC5	Q03897	1148 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	NSI1	Q12457	570 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	MSB1	P21339	1137 aa	Known RBP	3.44	□□□□□ -1.86
NUP82	YJL061W	BAS1	P22035	811 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	MCM7	P38132	845 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	NNF1	P47149	201 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	TIF35	Q04067	274 aa	Known RBP	3.44	□□□□□ -1.86
NUP82	YJL061W	OPI10	Q08202	246 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	PUS7	Q08647	676 aa	Known RBP	3.44	□□□□□ -1.86
NUP82	YJL061W	YLR122C	Q12312	125 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	RKM4	Q12504	494 aa		3.44	□□□□□ -1.86
NUP82	YJL061W	INO1	P11986	533 aa		3.43	□□□□□ -1.86
NUP82	YJL061W	WHI3	P34761	661 aa	Known RBP	3.43	□□□□□ -1.86
NUP82	YJL061W	LSB3	P43603	459 aa	Known RBP	3.43	□□□□□ -1.86
NUP82	YJL061W	AOS1	Q06624	347 aa		3.43	□□□□□ -1.86
NUP82	YJL061W	SSF2	Q12153	453 aa	Predicted RBP	3.43	□□□□□ -1.86
NUP82	YJL061W	PRI2	P20457	528 aa		3.43	□□□□□ -1.86
NUP82	YJL061W	KIP1	P28742	1111 aa		3.43	□□□□□ -1.86
NUP82	YJL061W	MLS1	P30952	554 aa		3.43	□□□□□ -1.86
NUP82	YJL061W	SPO21	Q12411	609 aa		3.43	□□□□□ -1.86
NUP82	YJL061W	AGP1	P25376	633 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	SBA1	P28707	216 aa	Known RBP	3.42	□□□□□ -1.86
NUP82	YJL061W	YKL107W	P34251	309 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	MPH1	P40562	993 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	YJL049W	P47048	450 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	YJL045W	P47052	634 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	RCM1	P53972	490 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	TDA5	Q06417	326 aa	Known RBP	3.42	□□□□□ -1.86
NUP82	YJL061W	GNT1	Q12096	491 aa		3.42	□□□□□ -1.86
NUP82	YJL061W	COQ4	O13525	335 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	RIP-Chip
NUP82	YJL061W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
NUP82	YJL061W	MOT2	P34909	587 aa	Known RBP	3.41	□□□□□ -1.86
NUP82	YJL061W	NMD3	P38861	518 aa	Known RBP	3.41	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms