RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MTR4P47047 1073 aaKnown RBP4.88□□□□□ -1.63
PEP8YJL053W SGD1Q06132 899 aa4.88□□□□□ -1.63
PEP8YJL053W PUS9Q12069 462 aa4.88□□□□□ -1.63
PEP8YJL053W QDR1P40475 563 aa4.87□□□□□ -1.63
PEP8YJL053W MSE1P48525 536 aa4.87□□□□□ -1.63
PEP8YJL053W MON1P53129 644 aa4.86□□□□□ -1.63
PEP8YJL053W PUF4P25339 888 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
PEP8YJL053W EXO5P38289 585 aa4.85□□□□□ -1.63
PEP8YJL053W LAM1P38851 1228 aa4.85□□□□□ -1.63
PEP8YJL053W MEF2P39677 819 aa4.85□□□□□ -1.63
PEP8YJL053W DMA2P53924 522 aa4.85□□□□□ -1.63
PEP8YJL053W YML122CQ03207 126 aa4.85□□□□□ -1.63
PEP8YJL053W GCN5Q03330 439 aa4.85□□□□□ -1.63
PEP8YJL053W KAR5Q04746 504 aa4.85□□□□□ -1.63
PEP8YJL053W RSA3Q05942 220 aaKnown RBP4.85□□□□□ -1.63
PEP8YJL053W INP54Q08227 384 aaKnown RBP4.85□□□□□ -1.63
PEP8YJL053W CDC55Q00362 526 aa4.84□□□□□ -1.63
PEP8YJL053W RSC58Q07979 502 aa4.84□□□□□ -1.63
PEP8YJL053W NEM1P38757 446 aa4.83□□□□□ -1.64
PEP8YJL053W YJL045WP47052 634 aa4.83□□□□□ -1.64
PEP8YJL053W HNT2P49775 206 aa4.83□□□□□ -1.64
PEP8YJL053W YNR063WP53749 607 aa4.83□□□□□ -1.64
PEP8YJL053W YDR132CQ03900 495 aa4.83□□□□□ -1.64
PEP8YJL053W URN1Q06525 465 aaKnown RBP4.83□□□□□ -1.64
PEP8YJL053W TRS120Q04183 1289 aa4.82□□□□□ -1.64
PEP8YJL053W CYC1P00044 109 aaPredicted RBP4.81□□□□□ -1.64
PEP8YJL053W ROT1Q03691 256 aa4.81□□□□□ -1.64
PEP8YJL053W HCM1P25364 564 aa4.8□□□□□ -1.64
PEP8YJL053W UTP5Q04177 643 aaKnown RBP4.8□□□□□ -1.64
PEP8YJL053W YSC84P32793 468 aa4.79□□□□□ -1.64
PEP8YJL053W XKS1P42826 600 aa4.79□□□□□ -1.64
PEP8YJL053W SUN4P53616 420 aa4.79□□□□□ -1.64
PEP8YJL053W QNS1P38795 714 aaKnown RBP4.78□□□□□ -1.64
PEP8YJL053W RSB1Q08417 382 aa4.78□□□□□ -1.64
PEP8YJL053W COQ4O13525 335 aa4.77□□□□□ -1.65
PEP8YJL053W CCZ1P38273 704 aa4.77□□□□□ -1.65
PEP8YJL053W ACF4P47129 309 aa4.77□□□□□ -1.65
PEP8YJL053W MCM6P53091 1017 aaKnown RBP4.77□□□□□ -1.65
PEP8YJL053W ATG1P53104 897 aa4.77□□□□□ -1.65
PEP8YJL053W MSH3P25336 1018 aa4.76□□□□□ -1.65
PEP8YJL053W DOM34P33309 386 aa4.76□□□□□ -1.65
PEP8YJL053W AIM21P40563 679 aa4.76□□□□□ -1.65
PEP8YJL053W SEC26P41810 973 aaKnown RBP4.76□□□□□ -1.65
PEP8YJL053W PEX13P80667 386 aa4.76□□□□□ -1.65
PEP8YJL053W TAF7Q05021 590 aa4.76□□□□□ -1.65
PEP8YJL053W NOC3Q07896 663 aaPredicted RBP4.76□□□□□ -1.65
PEP8YJL053W MNL2Q12205 849 aa4.76□□□□□ -1.65
PEP8YJL053W VMA4P22203 233 aaKnown RBP4.75□□□□□ -1.65
PEP8YJL053W VPS53P47061 822 aa4.75□□□□□ -1.65
PEP8YJL053W MNN10P50108 393 aaKnown RBP4.75□□□□□ -1.65
PEP8YJL053W SLI1P53304 468 aa4.75□□□□□ -1.65
PEP8YJL053W CTF4Q01454 927 aa4.75□□□□□ -1.65
PEP8YJL053W NOG1Q02892 647 aaKnown RBP4.75□□□□□ -1.65
PEP8YJL053W TMA10Q06177 86 aa4.74□□□□□ -1.65
PEP8YJL053W RXT3Q07458 294 aa4.74□□□□□ -1.65
PEP8YJL053W PMI40P29952 429 aaKnown RBP4.73□□□□□ -1.65
PEP8YJL053W RPL34AP87262 121 aaPredicted RBP4.73□□□□□ -1.65
PEP8YJL053W YCS4Q06156 1176 aa4.73□□□□□ -1.65
PEP8YJL053W STE11P23561 717 aa4.72□□□□□ -1.65
PEP8YJL053W RSM26P47141 266 aa4.72□□□□□ -1.65
PEP8YJL053W SAM37P50110 327 aa4.72□□□□□ -1.65
PEP8YJL053W PLB2Q03674 706 aa4.72□□□□□ -1.65
PEP8YJL053W RSM24Q03976 319 aa4.72□□□□□ -1.65
PEP8YJL053W DUS4Q06063 367 aa4.72□□□□□ -1.65
PEP8YJL053W ACK1Q07622 623 aaPredicted RBP4.72□□□□□ -1.65
PEP8YJL053W NTO1Q12311 748 aa4.72□□□□□ -1.65
PEP8YJL053W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
PEP8YJL053W RAD53P22216 821 aa4.71□□□□□ -1.66
PEP8YJL053W RCL1Q08096 367 aaPredicted RBP4.71□□□□□ -1.66
PEP8YJL053W LST4P34239 828 aa4.7□□□□□ -1.66
PEP8YJL053W SQT1P35184 431 aa4.7□□□□□ -1.66
PEP8YJL053W PBP1P53297 722 aaKnown RBP4.7□□□□□ -1.66
PEP8YJL053W HOS3Q02959 697 aaKnown RBP4.7□□□□□ -1.66
PEP8YJL053W CDC20P26309 610 aa4.69□□□□□ -1.66
PEP8YJL053W ADD66P36040 267 aa4.69□□□□□ -1.66
PEP8YJL053W TNA1P53322 534 aa4.69□□□□□ -1.66
PEP8YJL053W RKM2Q03942 479 aa4.69□□□□□ -1.66
PEP8YJL053W GPB1Q08886 897 aa4.69□□□□□ -1.66
PEP8YJL053W GAL10P04397 699 aa4.68□□□□□ -1.66
PEP8YJL053W CMP2P14747 604 aa4.68□□□□□ -1.66
PEP8YJL053W CIC1P38779 376 aaKnown RBP4.68□□□□□ -1.66
PEP8YJL053W KIP1P28742 1111 aa4.67□□□□□ -1.66
PEP8YJL053W RFC5P38251 354 aa4.67□□□□□ -1.66
PEP8YJL053W PHO23P50947 330 aa4.67□□□□□ -1.66
PEP8YJL053W SPO21Q12411 609 aa4.67□□□□□ -1.66
PEP8YJL053W PIK1P39104 1066 aa4.66□□□□□ -1.66
PEP8YJL053W GPB2P39717 880 aa4.66□□□□□ -1.66
PEP8YJL053W BAP2P38084 609 aa4.65□□□□□ -1.67
PEP8YJL053W SUB2Q07478 446 aaKnown RBP4.65□□□□□ -1.67
PEP8YJL053W KAR2P16474 682 aaKnown RBP4.64□□□□□ -1.67
PEP8YJL053W GRS1P38088 690 aaKnown RBP4.63□□□□□ -1.67
PEP8YJL053W PEX28P38848 579 aa4.63□□□□□ -1.67
PEP8YJL053W GTF1P53260 183 aaPredicted RBP4.63□□□□□ -1.67
PEP8YJL053W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
PEP8YJL053W PTC5Q12511 572 aa4.63□□□□□ -1.67
PEP8YJL053W KIN2P13186 1147 aaKnown RBP4.62□□□□□ -1.67
PEP8YJL053W CHS7P38843 316 aa4.62□□□□□ -1.67
PEP8YJL053W YLR224WQ05947 369 aa4.62□□□□□ -1.67
PEP8YJL053W PMA1P05030 918 aaKnown RBP4.61□□□□□ -1.67
PEP8YJL053W PRP40P33203 583 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 133.6 ms