RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C MLH2Q07980 695 aa5.08□□□□□ -1.6
PAN1YIR006C CDC16P09798 840 aa5.07□□□□□ -1.6
PAN1YIR006C CRG1P38892 291 aaRIP-Chip data5.07□□□□□ -1.6not detected
PAN1YIR006C CIN4P39110 191 aa5.07□□□□□ -1.6
PAN1YIR006C FAR11P53917 953 aa5.07□□□□□ -1.6
PAN1YIR006C GTR1Q00582 310 aa5.07□□□□□ -1.6
PAN1YIR006C PSF3Q12146 194 aa5.07□□□□□ -1.6
PAN1YIR006C TRS85P46944 698 aa5.07□□□□□ -1.6
PAN1YIR006C NAF1P53919 492 aaKnown RBP5.07□□□□□ -1.6
PAN1YIR006C COG4Q06096 861 aa5.07□□□□□ -1.6
PAN1YIR006C ACE2P21192 770 aa5.07□□□□□ -1.6
PAN1YIR006C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
PAN1YIR006C TIF5P38431 405 aaKnown RBP5.07□□□□□ -1.6
PAN1YIR006C YGR237CP50089 785 aa5.07□□□□□ -1.6
PAN1YIR006C UME1Q03010 460 aa5.07□□□□□ -1.6
PAN1YIR006C FCP1Q03254 732 aa5.07□□□□□ -1.6
PAN1YIR006C CLF1Q12309 687 aaPredicted RBP5.07□□□□□ -1.6
PAN1YIR006C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6 RIP-Chip
PAN1YIR006C SEC18P18759 758 aaKnown RBP5.07□□□□□ -1.6
PAN1YIR006C VPS35P34110 944 aa5.07□□□□□ -1.6
PAN1YIR006C RPC25P35718 212 aa5.07□□□□□ -1.6
PAN1YIR006C DAS1P47005 663 aa5.07□□□□□ -1.6
PAN1YIR006C TY4A-JP47023 414 aa5.07□□□□□ -1.6
PAN1YIR006C ALD2P47771 506 aa5.07□□□□□ -1.6
PAN1YIR006C CAF130P53280 1122 aaPredicted RBP5.07□□□□□ -1.6
PAN1YIR006C ALD3P54114 506 aa5.07□□□□□ -1.6
PAN1YIR006C SSL2Q00578 843 aa5.07□□□□□ -1.6
PAN1YIR006C TSR1Q07381 788 aaKnown RBP5.07□□□□□ -1.6
PAN1YIR006C BDF2Q07442 638 aa5.07□□□□□ -1.6
PAN1YIR006C MPC54Q08550 464 aa5.07□□□□□ -1.6
PAN1YIR006C YKL068W-AQ3E826 78 aa5.07□□□□□ -1.6
PAN1YIR006C ELM1P32801 640 aa5.06□□□□□ -1.6
PAN1YIR006C PCH2P38126 564 aa5.06□□□□□ -1.6
PAN1YIR006C RGD2P43556 714 aa5.06□□□□□ -1.6
PAN1YIR006C IOC3P43596 787 aa5.06□□□□□ -1.6
PAN1YIR006C NNF2P53253 936 aa5.06□□□□□ -1.6
PAN1YIR006C PTA1Q01329 785 aaPredicted RBP5.06□□□□□ -1.6
PAN1YIR006C TRS120Q04183 1289 aa5.06□□□□□ -1.6
PAN1YIR006C MATALPHA2P0CY08 210 aa5.06□□□□□ -1.6
PAN1YIR006C HMLALPHA2P0CY09 210 aa5.06□□□□□ -1.6
PAN1YIR006C PSE1P32337 1089 aaKnown RBP5.06□□□□□ -1.6
PAN1YIR006C ATG3P40344 310 aa5.06□□□□□ -1.6
PAN1YIR006C FYV10P40492 516 aa5.06□□□□□ -1.6
PAN1YIR006C TPO2P53283 614 aa5.06□□□□□ -1.6
PAN1YIR006C CNM67P53865 581 aaKnown RBP5.06□□□□□ -1.6
PAN1YIR006C GET3Q12154 354 aaKnown RBP5.06□□□□□ -1.6
PAN1YIR006C BEM4P39011 633 aa5.05□□□□□ -1.6
PAN1YIR006C TOS3P43637 560 aa5.05□□□□□ -1.6
PAN1YIR006C UBA2P52488 636 aa5.05□□□□□ -1.6
PAN1YIR006C VPS4P52917 437 aa5.05□□□□□ -1.6
PAN1YIR006C TBF1Q02457 562 aa5.05□□□□□ -1.6
PAN1YIR006C HFD1Q04458 532 aa5.05□□□□□ -1.6
PAN1YIR006C YPL225WQ08971 146 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C GLE1Q12315 538 aa5.05□□□□□ -1.6
PAN1YIR006C COBP00163 385 aa5.05□□□□□ -1.6
PAN1YIR006C PTK1P36002 662 aaPredicted RBP5.05□□□□□ -1.6
PAN1YIR006C RIO2P40160 425 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C MSN5P52918 1224 aa5.05□□□□□ -1.6
PAN1YIR006C ESF2P53743 316 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C YLR271WQ06152 274 aa5.05□□□□□ -1.6
PAN1YIR006C THI3Q07471 609 aa5.05□□□□□ -1.6
PAN1YIR006C INP54Q08227 384 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C RPA190P10964 1664 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C RPB2P08518 1224 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C PWP1P21304 576 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C SMY1P32364 656 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C ECM2P38241 364 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C CCT2P39076 527 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C ENV9Q08651 330 aa5.05□□□□□ -1.6
PAN1YIR006C BCK1Q01389 1478 aa5.05□□□□□ -1.6
PAN1YIR006C MAK11P20484 414 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C PEX5P35056 612 aa5.05□□□□□ -1.6
PAN1YIR006C SPC42P36094 363 aa5.05□□□□□ -1.6
PAN1YIR006C PPS1P38148 807 aa5.05□□□□□ -1.6
PAN1YIR006C FZO1P38297 855 aa5.05□□□□□ -1.6
PAN1YIR006C UTP6Q02354 440 aaKnown RBP5.05□□□□□ -1.6
PAN1YIR006C MMR1Q06324 491 aa5.05□□□□□ -1.6
PAN1YIR006C KEL3Q08979 651 aaPredicted RBP5.05□□□□□ -1.6
PAN1YIR006C RAD53P22216 821 aa5.04□□□□□ -1.6
PAN1YIR006C CLB4P24871 460 aa5.04□□□□□ -1.6
PAN1YIR006C SNT1P25357 1226 aa5.04□□□□□ -1.6
PAN1YIR006C YEL1P34225 687 aa5.04□□□□□ -1.6
PAN1YIR006C YIL055CP40523 627 aaKnown RBP5.04□□□□□ -1.6
PAN1YIR006C SAP185P40856 1058 aa5.04□□□□□ -1.6
PAN1YIR006C SML1Q04964 104 aa5.04□□□□□ -1.6
PAN1YIR006C PEX15Q08215 383 aa5.04□□□□□ -1.6
PAN1YIR006C PHM7Q12252 991 aa5.04□□□□□ -1.6
PAN1YIR006C ILV1P00927 576 aaKnown RBP5.04□□□□□ -1.6
PAN1YIR006C FRD1P32614 470 aaKnown RBP5.04□□□□□ -1.6
PAN1YIR006C YET1P35723 206 aa5.04□□□□□ -1.6
PAN1YIR006C UBP13P38187 747 aa5.04□□□□□ -1.6
PAN1YIR006C SSP1P38871 571 aa5.04□□□□□ -1.6
PAN1YIR006C RTS1P38903 757 aa5.04□□□□□ -1.6
PAN1YIR006C INA22P40576 216 aa5.04□□□□□ -1.6
PAN1YIR006C RPT6Q01939 405 aaKnown RBP5.04□□□□□ -1.6
PAN1YIR006C CHS2P14180 963 aa5.04□□□□□ -1.6
PAN1YIR006C SIC1P38634 284 aa5.04□□□□□ -1.6
PAN1YIR006C TAF1P46677 1066 aa5.04□□□□□ -1.6
PAN1YIR006C RPS15Q01855 142 aaKnown RBP5.04□□□□□ -1.6
PAN1YIR006C CWC21Q03375 135 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms