RNA–Protein interactions for RNA: YIL013C

PDR11, Transcript of ATP-binding cassette (ABC) transporter, yeast

Gene PDR11, Length 4,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR11	YIL013C	TUB2	P02557	457 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	SLD5	Q03406	294 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	TLG2	Q08144	397 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	OXP1	P28273	1286 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	BBC1	P47068	1157 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	LIF1	P53150	421 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	HIF1	Q12373	385 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	SMC6	Q12749	1114 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	RGP1	P16664	663 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	RNR3	P21672	869 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	RPC53	P25441	422 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	EBP2	P36049	427 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	RGD1	P38339	666 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	RSM25	P40496	264 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	VID28	P40547	921 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	OYE2	Q03558	400 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	TFC6	Q06339	672 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	UTP4	Q06679	776 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	TUF1	P02992	437 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	NUC1	P08466	329 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	RAD18	P10862	487 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	SNF3	P10870	884 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	SDH2	P21801	266 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	AAP1	P37898	856 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	ISW1	P38144	1129 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	KEL1	P38853	1164 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	PNT1	P38969	423 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	CCT3	P39077	534 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	CWC21	Q03375	135 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	HCR1	Q05775	265 aa	Known RBP	2.7	□□□□□ -1.98
PDR11	YIL013C	HFI1	Q12060	488 aa		2.7	□□□□□ -1.98
PDR11	YIL013C	TFC4	P33339	1025 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	PGM1	P33401	570 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	RXT2	P38255	430 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	GUA1	P38625	525 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	GLO3	P38682	493 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	MSC7	P38694	644 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	RPN10	P38886	268 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	AKR1	P39010	764 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	COS5	P47187	383 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	MTC3	P53077	123 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	YOR296W	Q08748	1289 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	ILV1	P00927	576 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	SAM2	P19358	384 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	MRF1	P30775	413 aa	Predicted RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	IXR1	P33417	597 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	MNR2	P35724	969 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	RFC5	P38251	354 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	GIR2	Q03768	265 aa	Predicted RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	ELG1	Q12050	791 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	PGA3	Q12746	312 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	PDC1	P06169	563 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	SKG6	P32900	734 aa	Predicted RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	FMS1	P50264	508 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	MDM1	Q01846	1127 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	MFM1	Q02783	413 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	FMP30	Q02883	468 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	BUL2	Q03758	920 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	EIS1	Q05050	843 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	FBP1	P09201	348 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	KRS1	P15180	591 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	OM45	P16547	393 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	SPB4	P25808	606 aa	Predicted RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	FBP26	P32604	452 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	UBP13	P38187	747 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	HXT13	P39924	564 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	ALD5	P40047	520 aa	Known RBP	2.69	□□□□□ -1.98
PDR11	YIL013C	EPS1	P40557	701 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
PDR11	YIL013C	VPS62	P53285	467 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	GIS4	Q04233	774 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	KAR5	Q04746	504 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	GPI13	Q07830	1017 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	OXR1	Q08952	273 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	YOR111W	Q99210	232 aa		2.69	□□□□□ -1.98
PDR11	YIL013C	PGK1	P00560	416 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	HEM1	P09950	548 aa	Predicted RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	PGI1	P12709	554 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	DBP5	P20449	482 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
PDR11	YIL013C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
PDR11	YIL013C	UTR4	P32626	227 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	MNN4	P36044	1178 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	SUL1	P38359	859 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	ILV3	P39522	585 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	CIR1	P42940	261 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	EPL1	P43572	832 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	EAR1	Q03212	550 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	CRD1	Q07560	283 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	PPM2	Q08282	695 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	SLK19	Q08581	821 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	CHS3	P29465	1165 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	PRX1	P34227	261 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	YKT6	P36015	200 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	PHO88	P38264	188 aa	Predicted RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	YJL007C	P47080	104 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	CTF18	P49956	741 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	TAF13	P11747	167 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	WHI3	P34761	661 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	SAP190	P36123	1033 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms