RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W RAD2P07276 1031 aa5.57□□□□□ -1.52
NMD3YHR170W RAD4P14736 754 aa5.57□□□□□ -1.52
NMD3YHR170W YKR075CP36155 307 aa5.57□□□□□ -1.52
NMD3YHR170W YIR007WP40566 764 aa5.57□□□□□ -1.52
NMD3YHR170W SPR3P41901 512 aa5.57□□□□□ -1.52
NMD3YHR170W RGD2P43556 714 aa5.57□□□□□ -1.52
NMD3YHR170W SKP1P52286 194 aa5.57□□□□□ -1.52
NMD3YHR170W CUS1Q02554 436 aaPredicted RBP5.57□□□□□ -1.52
NMD3YHR170W NSE3Q05541 303 aa5.57□□□□□ -1.52
NMD3YHR170W PPX1P38698 397 aa5.56□□□□□ -1.52
NMD3YHR170W RPN11P43588 306 aaKnown RBP5.56□□□□□ -1.52
NMD3YHR170W YBP2P53169 641 aa5.56□□□□□ -1.52
NMD3YHR170W YNR040WP53736 256 aa5.56□□□□□ -1.52
NMD3YHR170W EDE1P34216 1381 aa5.55□□□□□ -1.52
NMD3YHR170W POL32P47110 350 aa5.55□□□□□ -1.52
NMD3YHR170W CAF120P53836 1060 aa5.55□□□□□ -1.52
NMD3YHR170W YOR296WQ08748 1289 aa5.55□□□□□ -1.52
NMD3YHR170W YDL176WQ12027 708 aa5.55□□□□□ -1.52
NMD3YHR170W STB3Q12427 513 aa5.55□□□□□ -1.52
NMD3YHR170W GAR1P28007 205 aaKnown RBP5.55□□□□□ -1.52
NMD3YHR170W SEC20P28791 383 aa5.55□□□□□ -1.52
NMD3YHR170W CUZ1P53899 274 aa5.55□□□□□ -1.52
NMD3YHR170W UFD2P54860 961 aa5.55□□□□□ -1.52
NMD3YHR170W CSI1Q04368 295 aa5.55□□□□□ -1.52
NMD3YHR170W DIT1P21623 536 aa5.54□□□□□ -1.52
NMD3YHR170W MET4P32389 672 aa5.54□□□□□ -1.52
NMD3YHR170W RAD24P32641 659 aa5.54□□□□□ -1.52
NMD3YHR170W SPC42P36094 363 aa5.54□□□□□ -1.52
NMD3YHR170W GIP1P38229 639 aa5.54□□□□□ -1.52
NMD3YHR170W NTA1P40354 457 aa5.54□□□□□ -1.52
NMD3YHR170W ITC1P53125 1264 aa5.54□□□□□ -1.52
NMD3YHR170W RMT2Q03305 412 aa5.54□□□□□ -1.52
NMD3YHR170W YOL057WQ08225 711 aa5.54□□□□□ -1.52
NMD3YHR170W LYS2P07702 1392 aa5.53□□□□□ -1.52
NMD3YHR170W UTP10P42945 1769 aaKnown RBP5.53□□□□□ -1.52
NMD3YHR170W SWC3P31376 625 aa5.53□□□□□ -1.52
NMD3YHR170W SMC1P32908 1225 aa5.53□□□□□ -1.52
NMD3YHR170W APL2P36000 726 aaPredicted RBP5.53□□□□□ -1.52
NMD3YHR170W ISW1P38144 1129 aa5.53□□□□□ -1.52
NMD3YHR170W NPR2P39923 615 aa5.53□□□□□ -1.52
NMD3YHR170W BUD27P43573 796 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
NMD3YHR170W RSC4Q02206 625 aa5.53□□□□□ -1.52
NMD3YHR170W VPS64Q03944 604 aa5.53□□□□□ -1.52
NMD3YHR170W YMR074CQ04773 145 aa5.53□□□□□ -1.52
NMD3YHR170W TIF6Q12522 245 aaKnown RBP5.53□□□□□ -1.52
NMD3YHR170W MRP7P12687 371 aa5.52□□□□□ -1.53
NMD3YHR170W FPR3P38911 411 aaKnown RBP5.52□□□□□ -1.53
NMD3YHR170W RAD55P38953 406 aa5.52□□□□□ -1.53
NMD3YHR170W EMG1Q06287 252 aaKnown RBP5.52□□□□□ -1.53
NMD3YHR170W RRP15Q06511 250 aaPredicted RBP5.52□□□□□ -1.53
NMD3YHR170W ATE1P16639 503 aa5.51□□□□□ -1.53
NMD3YHR170W MSC7P38694 644 aa5.51□□□□□ -1.53
NMD3YHR170W APM2P38700 605 aa5.51□□□□□ -1.53
NMD3YHR170W YNL011CP53980 444 aa5.51□□□□□ -1.53
NMD3YHR170W YMR265CQ03508 461 aaKnown RBP5.51□□□□□ -1.53
NMD3YHR170W YDR306CQ06640 478 aa5.51□□□□□ -1.53
NMD3YHR170W SWI1P09547 1314 aa5.51□□□□□ -1.53
NMD3YHR170W GRX1P25373 110 aaKnown RBP5.5□□□□□ -1.53
NMD3YHR170W PRP40P33203 583 aaKnown RBP5.5□□□□□ -1.53
NMD3YHR170W NUP133P36161 1157 aa5.5□□□□□ -1.53
NMD3YHR170W FIR1P40020 876 aa5.5□□□□□ -1.53
NMD3YHR170W PSY2P40164 858 aa5.5□□□□□ -1.53
NMD3YHR170W YJL181WP46987 611 aa5.5□□□□□ -1.53
NMD3YHR170W SPO1P53541 631 aa5.5□□□□□ -1.53
NMD3YHR170W KRE33P53914 1056 aaKnown RBP5.5□□□□□ -1.53
NMD3YHR170W FAR11P53917 953 aa5.5□□□□□ -1.53
NMD3YHR170W RGA2Q06407 1009 aa5.5□□□□□ -1.53
NMD3YHR170W IRS4P36115 615 aaKnown RBP5.5□□□□□ -1.53
NMD3YHR170W OCA5P38738 679 aa5.5□□□□□ -1.53
NMD3YHR170W YNG2P38806 282 aaKnown RBP5.5□□□□□ -1.53
NMD3YHR170W YIL165CP40446 119 aa5.5□□□□□ -1.53
NMD3YHR170W LYS4P49367 693 aaPredicted RBP5.5□□□□□ -1.53
NMD3YHR170W CDC55Q00362 526 aa5.5□□□□□ -1.53
NMD3YHR170W PHO4P07270 312 aaKnown RBP5.49□□□□□ -1.53
NMD3YHR170W ADE12P80210 433 aaKnown RBP5.49□□□□□ -1.53
NMD3YHR170W CTR9P89105 1077 aa5.49□□□□□ -1.53
NMD3YHR170W SYT1Q06836 1226 aa5.49□□□□□ -1.53
NMD3YHR170W YDR461C-AQ2V2P7 80 aa5.49□□□□□ -1.53
NMD3YHR170W RPS19AP07280 144 aaKnown RBP5.48□□□□□ -1.53
NMD3YHR170W RPS19BP07281 144 aaPredicted RBP5.48□□□□□ -1.53
NMD3YHR170W NUG1P40010 520 aaKnown RBP5.48□□□□□ -1.53
NMD3YHR170W YGL082WP53155 381 aa5.48□□□□□ -1.53
NMD3YHR170W RTS3P53289 263 aa5.48□□□□□ -1.53
NMD3YHR170W DNM1P54861 757 aa5.48□□□□□ -1.53
NMD3YHR170W FCP1Q03254 732 aa5.48□□□□□ -1.53
NMD3YHR170W SER1P33330 395 aaKnown RBP5.47□□□□□ -1.53
NMD3YHR170W NCL1P38205 684 aaKnown RBP5.47□□□□□ -1.53
NMD3YHR170W AIM46P38885 310 aa5.47□□□□□ -1.53
NMD3YHR170W BOI2P39969 1040 aa5.47□□□□□ -1.53
NMD3YHR170W ATG36P46983 293 aa5.47□□□□□ -1.53
NMD3YHR170W DOS2P54858 310 aa5.47□□□□□ -1.53
NMD3YHR170W SSP2Q08646 371 aa5.47□□□□□ -1.53
NMD3YHR170W LPD1P09624 499 aaKnown RBP5.46□□□□□ -1.53
NMD3YHR170W IDI1P15496 288 aa5.46□□□□□ -1.53
NMD3YHR170W TY1A-DR2Q03964 440 aaKnown RBP5.46□□□□□ -1.53
NMD3YHR170W PHM7Q12252 991 aa5.46□□□□□ -1.53
NMD3YHR170W MRP10O75012 95 aa5.46□□□□□ -1.54
NMD3YHR170W FPS1P23900 669 aa5.46□□□□□ -1.54
NMD3YHR170W ASF1P32447 279 aa5.46□□□□□ -1.54
NMD3YHR170W DUR3P33413 735 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms