RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	KAR2	P16474	682 aa	Known RBP	5.13	□□□□□ -1.59
XKS1	YGR194C	YGL081W	P53156	320 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	ALD3	P54114	506 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	MNL2	Q12205	849 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	SLP1	Q12232	587 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	GRS1	P38088	690 aa	Known RBP	5.13	□□□□□ -1.59
XKS1	YGR194C	LSB3	P43603	459 aa	Known RBP	5.13	□□□□□ -1.59
XKS1	YGR194C	CCT8	P47079	568 aa	Known RBP	5.13	□□□□□ -1.59
XKS1	YGR194C	BIO5	P53744	561 aa	Known RBP	5.13	□□□□□ -1.59
XKS1	YGR194C	MDG1	P53885	366 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	RSC4	Q02206	625 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	TRS120	Q04183	1289 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	ESC2	Q06340	456 aa		5.13	□□□□□ -1.59
XKS1	YGR194C	MLP1	Q02455	1875 aa	Known RBP	5.13	□□□□□ -1.59
XKS1	YGR194C	IML1	P47170	1584 aa		5.12	□□□□□ -1.59
XKS1	YGR194C	FUS1	P11710	512 aa		5.12	□□□□□ -1.59
XKS1	YGR194C	PRD1	P25375	712 aa		5.12	□□□□□ -1.59
XKS1	YGR194C	TFA2	P36145	328 aa		5.12	□□□□□ -1.59
XKS1	YGR194C	TPM2	P40414	161 aa		5.12	□□□□□ -1.59
XKS1	YGR194C	BUD9	P53226	547 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	SOK2	P53438	785 aa	Predicted RBP	5.11	□□□□□ -1.59
XKS1	YGR194C	SOG2	Q08817	791 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	HAP1	P0CE41	1502 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	NUP192	P47054	1683 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	PYC2	P32327	1180 aa	Known RBP	5.11	□□□□□ -1.59
XKS1	YGR194C	GIP2	P40036	548 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	PRY1	P47032	299 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	HEF3	P53978	1044 aa	Known RBP	5.11	□□□□□ -1.59
XKS1	YGR194C	ECM16	Q04217	1267 aa	Known RBP	5.11	□□□□□ -1.59
XKS1	YGR194C	RTT109	Q07794	436 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	FRT1	Q99332	602 aa		5.11	□□□□□ -1.59
XKS1	YGR194C	TY4B-P	A0A0B7P3V8	1104 aa		5.1	□□□□□ -1.59
XKS1	YGR194C	MIC60	P36112	540 aa		5.1	□□□□□ -1.59
XKS1	YGR194C	SSF1	P38789	453 aa	Predicted RBP	5.1	□□□□□ -1.59
XKS1	YGR194C	TED1	P40533	473 aa		5.1	□□□□□ -1.59
XKS1	YGR194C	TY4A-H	Q6Q5P6	413 aa		5.1	□□□□□ -1.59
XKS1	YGR194C	RAD9	P14737	1309 aa		5.1	□□□□□ -1.59
XKS1	YGR194C	MCM2	P29469	868 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	AMN1	P38285	549 aa	Predicted RBP	5.09	□□□□□ -1.59
XKS1	YGR194C	RRM3	P38766	723 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	RAD26	P40352	1085 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	GUP1	P53154	560 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	PIL1	P53252	339 aa	Known RBP	5.09	□□□□□ -1.59
XKS1	YGR194C	YNL011C	P53980	444 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	NUT2	Q06213	157 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	YML133C	Q03099	1374 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	YLL067C	Q07888	1374 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	YLL066C	Q99208	1374 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	RAD50	P12753	1312 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	NUP145	P49687	1317 aa		5.09	□□□□□ -1.59
XKS1	YGR194C	COB	P00163	385 aa		5.09	□□□□□ -1.6
XKS1	YGR194C	HVG1	P0CE11	249 aa		5.09	□□□□□ -1.6
XKS1	YGR194C	RNA1	P11745	407 aa	Known RBP	5.09	□□□□□ -1.6
XKS1	YGR194C	NKP2	Q06162	153 aa		5.09	□□□□□ -1.6
XKS1	YGR194C	GPI13	Q07830	1017 aa		5.09	□□□□□ -1.6
XKS1	YGR194C	GAS5	Q08193	484 aa		5.09	□□□□□ -1.6
XKS1	YGR194C	GLO4	Q12320	285 aa		5.09	□□□□□ -1.6
XKS1	YGR194C	RKM3	P38222	552 aa		5.08	□□□□□ -1.6
XKS1	YGR194C	CDC55	Q00362	526 aa		5.08	□□□□□ -1.6
XKS1	YGR194C	MCA1	Q08601	432 aa		5.08	□□□□□ -1.6
XKS1	YGR194C	SIR4	P11978	1358 aa		5.08	□□□□□ -1.6
XKS1	YGR194C	MET5	P47169	1442 aa		5.08	□□□□□ -1.6
XKS1	YGR194C	AI3	P03877	415 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	TAT1	P38085	619 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	RVS167	P39743	482 aa	Known RBP	5.07	□□□□□ -1.6
XKS1	YGR194C	LEM3	P42838	414 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	SMC3	P47037	1230 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	YNR065C	P53751	1116 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	HOS3	Q02959	697 aa	Known RBP	5.07	□□□□□ -1.6
XKS1	YGR194C	RPN12	P32496	274 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	RFC1	P38630	861 aa	Known RBP	5.07	□□□□□ -1.6
XKS1	YGR194C	PAN5	P38787	379 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	BDH2	P39713	417 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	NPA3	P47122	385 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	YJR124C	P47159	448 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	URN1	Q06525	465 aa	Known RBP	5.07	□□□□□ -1.6
XKS1	YGR194C	HIM1	Q06674	414 aa		5.07	□□□□□ -1.6
XKS1	YGR194C	DUR3	P33413	735 aa		5.06	□□□□□ -1.6
XKS1	YGR194C	TYS1	P36421	394 aa	Known RBP	5.06	□□□□□ -1.6
XKS1	YGR194C	YHL050C	P38721	697 aa		5.06	□□□□□ -1.6
XKS1	YGR194C	YHR219W	P38900	624 aa		5.06	□□□□□ -1.6
XKS1	YGR194C	VPS20	Q04272	221 aa		5.06	□□□□□ -1.6
XKS1	YGR194C	BSC2	Q05611	235 aa		5.06	□□□□□ -1.6
XKS1	YGR194C	NUP188	P52593	1655 aa	Known RBP	5.05	□□□□□ -1.6
XKS1	YGR194C	BIK1	P11709	440 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	SFA1	P32771	386 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	TCD1	P38756	429 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	RRT14	P40470	206 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	RSM25	P40496	264 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	CIR1	P42940	261 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	LSB6	P42951	607 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	SEC7	P11075	2009 aa	Known RBP	5.05	□□□□□ -1.6
XKS1	YGR194C	YRF1-4	O13559	1382 aa		5.05	□□□□□ -1.6
XKS1	YGR194C	ROM2	P51862	1356 aa	Known RBP	5.05	□□□□□ -1.6
XKS1	YGR194C	CYC8	P14922	966 aa		5.04	□□□□□ -1.6
XKS1	YGR194C	SAC7	P17121	654 aa		5.04	□□□□□ -1.6
XKS1	YGR194C	MFT1	P33441	392 aa	Known RBP	5.04	□□□□□ -1.6
XKS1	YGR194C	BRN1	P38170	754 aa		5.04	□□□□□ -1.6
XKS1	YGR194C	NMD2	P38798	1089 aa	Known RBP	5.04	□□□□□ -1.6
XKS1	YGR194C	YNG2	P38806	282 aa	Known RBP	5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms