RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W YKR075CP36155 307 aa12.61□□□□□ -0.39
RTF1YGL244W VFA1P40080 203 aa12.61□□□□□ -0.39
RTF1YGL244W ALG2P43636 503 aa12.61□□□□□ -0.39
RTF1YGL244W NOP6Q07623 225 aaKnown RBP12.61□□□□□ -0.39
RTF1YGL244W TIP41Q12199 356 aa12.61□□□□□ -0.39
RTF1YGL244W MYO3P36006 1272 aa12.6□□□□□ -0.39
RTF1YGL244W TIF4632P39936 914 aaKnown RBP12.6□□□□□ -0.39
RTF1YGL244W DAK2P43550 591 aa12.6□□□□□ -0.39
RTF1YGL244W HFM1P51979 1187 aa12.6□□□□□ -0.39
RTF1YGL244W FOX2Q02207 900 aaKnown RBP12.6□□□□□ -0.39
RTF1YGL244W UME1Q03010 460 aa12.6□□□□□ -0.39
RTF1YGL244W NGL3Q03210 505 aa12.6□□□□□ -0.39
RTF1YGL244W YPL225WQ08971 146 aaKnown RBP12.6□□□□□ -0.39
RTF1YGL244W YOR223WQ12015 292 aa12.6□□□□□ -0.39
RTF1YGL244W RAD1P06777 1100 aa12.59□□□□□ -0.39
RTF1YGL244W CKI1P20485 582 aa12.59□□□□□ -0.39
RTF1YGL244W SWE1P32944 819 aa12.59□□□□□ -0.39
RTF1YGL244W VPS8P39702 1274 aa12.59□□□□□ -0.39
RTF1YGL244W YAP5P40574 245 aa12.59□□□□□ -0.39
RTF1YGL244W RMP1Q12530 201 aa12.59□□□□□ -0.39
RTF1YGL244W TOP1P04786 769 aa12.58□□□□□ -0.4
RTF1YGL244W MAK31P23059 88 aa12.58□□□□□ -0.4
RTF1YGL244W MGM1P32266 881 aa12.58□□□□□ -0.4
RTF1YGL244W DOT5P40553 215 aa12.58□□□□□ -0.4
RTF1YGL244W YJR079WP47126 109 aa12.58□□□□□ -0.4
RTF1YGL244W MRD1Q06106 887 aaKnown RBP12.58□□□□□ -0.4
RTF1YGL244W MET6P05694 767 aaKnown RBP12.57□□□□□ -0.4
RTF1YGL244W CSM2P40465 213 aa12.57□□□□□ -0.4
RTF1YGL244W CDC8P00572 216 aa12.57□□□□□ -0.4
RTF1YGL244W IMH1Q06704 911 aaKnown RBP12.57□□□□□ -0.4
RTF1YGL244W RAD53P22216 821 aa12.56□□□□□ -0.4
RTF1YGL244W PAP1P29468 568 aaKnown RBP12.56□□□□□ -0.4
RTF1YGL244W AVT3P36062 692 aa12.56□□□□□ -0.4
RTF1YGL244W BOI1P38041 980 aaKnown RBP12.56□□□□□ -0.4
RTF1YGL244W PTC4P38089 393 aa12.56□□□□□ -0.4
RTF1YGL244W RTS1P38903 757 aa12.56□□□□□ -0.4
RTF1YGL244W YAP7Q08182 245 aa12.56□□□□□ -0.4
RTF1YGL244W TOM70P07213 617 aaKnown RBP12.55□□□□□ -0.4
RTF1YGL244W PDC6P26263 563 aaKnown RBP12.55□□□□□ -0.4
RTF1YGL244W RPC25P35718 212 aa12.55□□□□□ -0.4
RTF1YGL244W YGL138CP53122 345 aa12.55□□□□□ -0.4
RTF1YGL244W GIS4Q04233 774 aa12.55□□□□□ -0.4
RTF1YGL244W YDR341CQ05506 607 aaKnown RBP12.55□□□□□ -0.4
RTF1YGL244W YLR001CQ07895 862 aa12.55□□□□□ -0.4
RTF1YGL244W PPR1P07272 904 aaPredicted RBP12.54□□□□□ -0.4
RTF1YGL244W CWC2Q12046 339 aaPredicted RBP12.54□□□□□ -0.4
RTF1YGL244W GRE2Q12068 342 aaKnown RBP12.54□□□□□ -0.4
RTF1YGL244W DPH6Q12429 685 aa12.54□□□□□ -0.4
RTF1YGL244W RIT1P23796 513 aa12.54□□□□□ -0.4
RTF1YGL244W YHL050CP38721 697 aa12.54□□□□□ -0.4
RTF1YGL244W SOV1Q04748 898 aa12.54□□□□□ -0.4
RTF1YGL244W YOL075CQ08234 1294 aa12.54□□□□□ -0.4
RTF1YGL244W MAD1P40957 749 aa12.53□□□□□ -0.4
RTF1YGL244W IES1P43579 692 aa12.53□□□□□ -0.4
RTF1YGL244W APP1P53933 587 aa12.53□□□□□ -0.4
RTF1YGL244W YNL035CP53962 389 aaKnown RBP12.53□□□□□ -0.4
RTF1YGL244W MYO5Q04439 1219 aaKnown RBP12.53□□□□□ -0.4
RTF1YGL244W POB3Q04636 552 aaKnown RBP12.53□□□□□ -0.4
RTF1YGL244W STE23Q06010 1027 aa12.53□□□□□ -0.4
RTF1YGL244W OPY2Q06810 360 aa12.53□□□□□ -0.4
RTF1YGL244W PSE1P32337 1089 aaKnown RBP12.52□□□□□ -0.4
RTF1YGL244W ERG7P38604 731 aa12.52□□□□□ -0.4
RTF1YGL244W YMR124WP39523 943 aaKnown RBP12.52□□□□□ -0.4
RTF1YGL244W VTC2P43585 828 aa12.52□□□□□ -0.4
RTF1YGL244W TOS4Q06266 489 aa12.52□□□□□ -0.4
RTF1YGL244W HXT1P32465 570 aa12.51□□□□□ -0.41
RTF1YGL244W ICP55P40051 511 aa12.51□□□□□ -0.41
RTF1YGL244W TRS85P46944 698 aa12.51□□□□□ -0.41
RTF1YGL244W UBA2P52488 636 aa12.51□□□□□ -0.41
RTF1YGL244W LAM6Q08001 693 aa12.51□□□□□ -0.41
RTF1YGL244W PRP40P33203 583 aaKnown RBP12.51□□□□□ -0.41
RTF1YGL244W PTK1P36002 662 aaPredicted RBP12.51□□□□□ -0.41
RTF1YGL244W SMC2P38989 1170 aaKnown RBP12.51□□□□□ -0.41
RTF1YGL244W PXA1P41909 870 aa12.51□□□□□ -0.41
RTF1YGL244W RAT1Q02792 1006 aaKnown RBP12.51□□□□□ -0.41
RTF1YGL244W TRS120Q04183 1289 aa12.51□□□□□ -0.41
RTF1YGL244W SPO75Q07798 868 aa12.51□□□□□ -0.41
RTF1YGL244W SDH5Q08230 162 aa12.51□□□□□ -0.41
RTF1YGL244W PLP2Q12017 286 aa12.51□□□□□ -0.41
RTF1YGL244W CIT1P00890 479 aa12.5□□□□□ -0.41
RTF1YGL244W STI1P15705 589 aaKnown RBP RIP-Chip data12.5□□□□□ -0.41not detected
RTF1YGL244W THR4P16120 514 aaKnown RBP12.5□□□□□ -0.41
RTF1YGL244W UGA2P38067 497 aa12.5□□□□□ -0.41
RTF1YGL244W STT3P39007 718 aaKnown RBP12.5□□□□□ -0.41
RTF1YGL244W VTI1Q04338 217 aa12.5□□□□□ -0.41
RTF1YGL244W OM45P16547 393 aa12.49□□□□□ -0.41
RTF1YGL244W DAL7P21826 554 aa12.49□□□□□ -0.41
RTF1YGL244W TDA3P38758 523 aa12.49□□□□□ -0.41
RTF1YGL244W CWC22P53333 577 aaKnown RBP12.49□□□□□ -0.41
RTF1YGL244W TUF1P02992 437 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W RPG1P38249 964 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W THI6P41835 540 aa12.48□□□□□ -0.41
RTF1YGL244W YGR153WP48238 217 aa12.48□□□□□ -0.41
RTF1YGL244W PRP42Q03776 544 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W YMR114CQ04471 368 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W DAS2Q12084 232 aa12.48□□□□□ -0.41
RTF1YGL244W FOB1O13329 566 aa12.48□□□□□ -0.41
RTF1YGL244W PRP16P15938 1071 aaPredicted RBP12.48□□□□□ -0.41
RTF1YGL244W YKL091CP33324 310 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W SWH1P35845 1188 aa12.48□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms