RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W PEP12P32854 288 aa7.01□□□□□ -1.29
RPT3YDR394W TTI1P36097 1038 aa7.01□□□□□ -1.29
RPT3YDR394W UTP7P40055 554 aaKnown RBP7.01□□□□□ -1.29
RPT3YDR394W RSM25P40496 264 aa7.01□□□□□ -1.29
RPT3YDR394W CIR1P42940 261 aa7.01□□□□□ -1.29
RPT3YDR394W NAM8Q00539 523 aaKnown RBP7.01□□□□□ -1.29
RPT3YDR394W ADR1P07248 1323 aa7.01□□□□□ -1.29
RPT3YDR394W PIF1P07271 859 aa7□□□□□ -1.29
RPT3YDR394W SLA1P32790 1244 aa7□□□□□ -1.29
RPT3YDR394W PBY1P38254 753 aa7□□□□□ -1.29
RPT3YDR394W MSN5P52918 1224 aa7□□□□□ -1.29
RPT3YDR394W UBP16Q02863 499 aa7□□□□□ -1.29
RPT3YDR394W PSK2Q08217 1101 aa7□□□□□ -1.29
RPT3YDR394W TY1A-DR3Q12441 440 aa7□□□□□ -1.29
RPT3YDR394W ELM1P32801 640 aa6.99□□□□□ -1.29
RPT3YDR394W RPN11P43588 306 aaKnown RBP6.99□□□□□ -1.29
RPT3YDR394W PEX14P53112 341 aa6.99□□□□□ -1.29
RPT3YDR394W PIB2P53191 635 aa6.99□□□□□ -1.29
RPT3YDR394W KRE33P53914 1056 aaKnown RBP6.99□□□□□ -1.29
RPT3YDR394W RPN7Q06103 429 aaKnown RBP6.99□□□□□ -1.29
RPT3YDR394W ETT1Q08421 412 aaKnown RBP6.99□□□□□ -1.29
RPT3YDR394W POM152P39685 1337 aa6.99□□□□□ -1.29
RPT3YDR394W RPN12P32496 274 aa6.98□□□□□ -1.29
RPT3YDR394W RVS167P39743 482 aaKnown RBP6.98□□□□□ -1.29
RPT3YDR394W SUM1P46676 1062 aa6.98□□□□□ -1.29
RPT3YDR394W YNL193WP53870 558 aa6.98□□□□□ -1.29
RPT3YDR394W RAT1Q02792 1006 aaKnown RBP6.98□□□□□ -1.29
RPT3YDR394W LCD1Q04377 747 aa6.98□□□□□ -1.29
RPT3YDR394W DIB1Q06819 143 aaPredicted RBP6.98□□□□□ -1.29
RPT3YDR394W PEX19Q07418 342 aa6.98□□□□□ -1.29
RPT3YDR394W PRX1P34227 261 aaKnown RBP6.97□□□□□ -1.29
RPT3YDR394W RKM3P38222 552 aa6.97□□□□□ -1.29
RPT3YDR394W YHL017WP38745 532 aa6.97□□□□□ -1.29
RPT3YDR394W UTP22P53254 1237 aaPredicted RBP6.97□□□□□ -1.29
RPT3YDR394W HPF1Q05164 967 aa6.97□□□□□ -1.29
RPT3YDR394W BUG1Q12191 341 aa6.97□□□□□ -1.29
RPT3YDR394W SWI5P08153 709 aa6.96□□□□□ -1.3
RPT3YDR394W MATALPHA2P0CY08 210 aa6.96□□□□□ -1.3
RPT3YDR394W HMLALPHA2P0CY09 210 aa6.96□□□□□ -1.3
RPT3YDR394W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
RPT3YDR394W GEF1P37020 779 aa6.96□□□□□ -1.3
RPT3YDR394W NPR2P39923 615 aa6.96□□□□□ -1.3
RPT3YDR394W NUG1P40010 520 aaKnown RBP6.96□□□□□ -1.3
RPT3YDR394W ENP2P48234 707 aaKnown RBP6.96□□□□□ -1.3
RPT3YDR394W CWH41P53008 833 aa6.96□□□□□ -1.3
RPT3YDR394W YGL081WP53156 320 aa6.96□□□□□ -1.3
RPT3YDR394W YGR035CP53222 116 aa6.96□□□□□ -1.3
RPT3YDR394W RSC1P53236 928 aa6.96□□□□□ -1.3
RPT3YDR394W ELG1Q12050 791 aa6.96□□□□□ -1.3
RPT3YDR394W YPL150WQ12152 901 aa6.96□□□□□ -1.3
RPT3YDR394W SSF2Q12153 453 aaPredicted RBP6.96□□□□□ -1.3
RPT3YDR394W RRI2Q12348 645 aa6.96□□□□□ -1.3
RPT3YDR394W TAF13P11747 167 aa6.95□□□□□ -1.3
RPT3YDR394W PEP3P27801 918 aa6.95□□□□□ -1.3
RPT3YDR394W SIS2P36024 562 aa6.95□□□□□ -1.3
RPT3YDR394W MET1P36150 593 aa6.95□□□□□ -1.3
RPT3YDR394W CIC1P38779 376 aaKnown RBP6.95□□□□□ -1.3
RPT3YDR394W CCT5P40413 562 aaKnown RBP6.95□□□□□ -1.3
RPT3YDR394W CTF18P49956 741 aa6.95□□□□□ -1.3
RPT3YDR394W YKE2P52553 114 aa6.95□□□□□ -1.3
RPT3YDR394W ARP5P53946 755 aa6.95□□□□□ -1.3
RPT3YDR394W YMR074CQ04773 145 aa6.95□□□□□ -1.3
RPT3YDR394W UBP1P25037 809 aa6.94□□□□□ -1.3
RPT3YDR394W AHP1P38013 176 aaKnown RBP6.94□□□□□ -1.3
RPT3YDR394W YFL034WP43564 1073 aa6.94□□□□□ -1.3
RPT3YDR394W UBP15P50101 1230 aa6.94□□□□□ -1.3
RPT3YDR394W ECM23Q02710 187 aa6.94□□□□□ -1.3
RPT3YDR394W YPQ2Q06328 317 aa6.94□□□□□ -1.3
RPT3YDR394W APC11Q12157 165 aa6.94□□□□□ -1.3
RPT3YDR394W TAH18Q12181 623 aa6.94□□□□□ -1.3
RPT3YDR394W LAM4P38800 1345 aa6.94□□□□□ -1.3
RPT3YDR394W CPA2P03965 1118 aaKnown RBP6.93□□□□□ -1.3
RPT3YDR394W RPS6AP0CX37 236 aaKnown RBP6.93□□□□□ -1.3
RPT3YDR394W RPS6BP0CX38 236 aaPredicted RBP6.93□□□□□ -1.3
RPT3YDR394W GLO3P38682 493 aaKnown RBP6.93□□□□□ -1.3
RPT3YDR394W CRG1P38892 291 aaRIP-Chip data6.93□□□□□ -1.3not detected
RPT3YDR394W YMR147WP40218 223 aaKnown RBP6.93□□□□□ -1.3
RPT3YDR394W KTR7P40504 517 aa6.93□□□□□ -1.3
RPT3YDR394W VID28P40547 921 aa6.93□□□□□ -1.3
RPT3YDR394W IOC3P43596 787 aa6.93□□□□□ -1.3
RPT3YDR394W JJJ2P46997 583 aa6.93□□□□□ -1.3
RPT3YDR394W KAR5Q04746 504 aa6.93□□□□□ -1.3
RPT3YDR394W DPH6Q12429 685 aa6.93□□□□□ -1.3
RPT3YDR394W TSC13Q99190 310 aa6.93□□□□□ -1.3
RPT3YDR394W RIM15P43565 1770 aa6.92□□□□□ -1.3
RPT3YDR394W CYB2P00175 591 aa6.92□□□□□ -1.3
RPT3YDR394W NGR1P32831 672 aaKnown RBP6.92□□□□□ -1.3
RPT3YDR394W SHM1P37292 490 aaPredicted RBP6.92□□□□□ -1.3
RPT3YDR394W ALA1P40825 983 aaKnown RBP6.92□□□□□ -1.3
RPT3YDR394W BUD6P41697 788 aa6.92□□□□□ -1.3
RPT3YDR394W SYF1Q04048 859 aaPredicted RBP6.92□□□□□ -1.3
RPT3YDR394W YLR407WQ06070 228 aa6.92□□□□□ -1.3
RPT3YDR394W ESF1Q06344 628 aaKnown RBP6.92□□□□□ -1.3
RPT3YDR394W THI3Q07471 609 aa6.92□□□□□ -1.3
RPT3YDR394W MBR1P23493 339 aa6.91□□□□□ -1.3
RPT3YDR394W IMP2'P32351 346 aa6.91□□□□□ -1.3
RPT3YDR394W EBP2P36049 427 aaKnown RBP6.91□□□□□ -1.3
RPT3YDR394W IRC8P47046 822 aa6.91□□□□□ -1.3
RPT3YDR394W CUZ1P53899 274 aa6.91□□□□□ -1.3
RPT3YDR394W SPN1Q06505 410 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms