RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C TFC6Q06339 672 aa6.99□□□□□ -1.29
VPS61YDR136C PDC1P06169 563 aaKnown RBP6.98□□□□□ -1.29
VPS61YDR136C MSH1P25846 959 aa6.98□□□□□ -1.29
VPS61YDR136C GRX7P38068 203 aa6.98□□□□□ -1.29
VPS61YDR136C RRP8P38961 392 aaKnown RBP6.98□□□□□ -1.29
VPS61YDR136C CCC2P38995 1004 aa6.98□□□□□ -1.29
VPS61YDR136C CAJ1P39101 391 aa6.98□□□□□ -1.29
VPS61YDR136C CAF130P53280 1122 aaPredicted RBP6.98□□□□□ -1.29
VPS61YDR136C UFD2P54860 961 aa6.98□□□□□ -1.29
VPS61YDR136C GIN4Q12263 1142 aa6.98□□□□□ -1.29
VPS61YDR136C YKL068W-AQ3E826 78 aa6.98□□□□□ -1.29
VPS61YDR136C HKR1P41809 1802 aa6.98□□□□□ -1.29
VPS61YDR136C CYB2P00175 591 aa6.97□□□□□ -1.29
VPS61YDR136C SEC23P15303 768 aaKnown RBP6.97□□□□□ -1.29
VPS61YDR136C VPS1P21576 704 aaKnown RBP6.97□□□□□ -1.29
VPS61YDR136C SAC6P32599 642 aaKnown RBP6.97□□□□□ -1.29
VPS61YDR136C NGR1P32831 672 aaKnown RBP6.97□□□□□ -1.29
VPS61YDR136C RRP1P35178 278 aaPredicted RBP6.97□□□□□ -1.29
VPS61YDR136C ALD2P47771 506 aa6.97□□□□□ -1.29
VPS61YDR136C GDE1Q02979 1223 aa6.97□□□□□ -1.29
VPS61YDR136C SML1Q04964 104 aa6.97□□□□□ -1.29
VPS61YDR136C VPS38Q05919 439 aa6.97□□□□□ -1.29
VPS61YDR136C AFT2Q08957 416 aa6.97□□□□□ -1.29
VPS61YDR136C CHO2P05374 869 aaKnown RBP6.96□□□□□ -1.3
VPS61YDR136C SSA2P10592 639 aaKnown RBP6.96□□□□□ -1.3
VPS61YDR136C PDR1P12383 1068 aa6.96□□□□□ -1.3
VPS61YDR136C NUD1P32336 851 aa6.96□□□□□ -1.3
VPS61YDR136C YEL043WP32618 956 aa6.96□□□□□ -1.3
VPS61YDR136C SAP190P36123 1033 aa6.96□□□□□ -1.3
VPS61YDR136C RXT2P38255 430 aa6.96□□□□□ -1.3
VPS61YDR136C RTT107P38850 1070 aa6.96□□□□□ -1.3
VPS61YDR136C NUG1P40010 520 aaKnown RBP6.96□□□□□ -1.3
VPS61YDR136C APP1P53933 587 aa6.96□□□□□ -1.3
VPS61YDR136C NIS1P53939 407 aa6.96□□□□□ -1.3
VPS61YDR136C RPS15Q01855 142 aaKnown RBP6.96□□□□□ -1.3
VPS61YDR136C RNT1Q02555 471 aa6.96□□□□□ -1.3
VPS61YDR136C RRB1Q04225 511 aaKnown RBP6.96□□□□□ -1.3
VPS61YDR136C THI3Q07471 609 aa6.96□□□□□ -1.3
VPS61YDR136C PTC5Q12511 572 aa6.96□□□□□ -1.3
VPS61YDR136C RPO26P20435 155 aa6.95□□□□□ -1.3
VPS61YDR136C RRP43P25359 394 aaPredicted RBP6.95□□□□□ -1.3
VPS61YDR136C DEP1P31385 405 aa6.95□□□□□ -1.3
VPS61YDR136C BCD1P38772 366 aa6.95□□□□□ -1.3
VPS61YDR136C VPS41P38959 992 aa6.95□□□□□ -1.3
VPS61YDR136C BUD16P39988 312 aa6.95□□□□□ -1.3
VPS61YDR136C SEC9P40357 651 aa6.95□□□□□ -1.3
VPS61YDR136C NDC80P40460 691 aa6.95□□□□□ -1.3
VPS61YDR136C NAF1P53919 492 aaKnown RBP6.95□□□□□ -1.3
VPS61YDR136C HDA1P53973 706 aa6.95□□□□□ -1.3
VPS61YDR136C RBA50Q04418 439 aa6.95□□□□□ -1.3
VPS61YDR136C YML082WQ04533 649 aaKnown RBP6.95□□□□□ -1.3
VPS61YDR136C INM2Q05533 292 aa6.95□□□□□ -1.3
VPS61YDR136C MMR1Q06324 491 aa6.95□□□□□ -1.3
VPS61YDR136C TLG2Q08144 397 aa6.95□□□□□ -1.3
VPS61YDR136C HMI1Q12039 706 aa6.95□□□□□ -1.3
VPS61YDR136C MYO1P08964 1928 aa6.95□□□□□ -1.3
VPS61YDR136C FLO1P32768 1537 aa6.95□□□□□ -1.3
VPS61YDR136C HIS4P00815 799 aaKnown RBP6.94□□□□□ -1.3
VPS61YDR136C ALG1P16661 449 aa6.94□□□□□ -1.3
VPS61YDR136C RNR3P21672 869 aaKnown RBP6.94□□□□□ -1.3
VPS61YDR136C SPO11P23179 398 aa6.94□□□□□ -1.3
VPS61YDR136C CLB1P24868 471 aa6.94□□□□□ -1.3
VPS61YDR136C MSH3P25336 1018 aa6.94□□□□□ -1.3
VPS61YDR136C SEC65P29478 273 aa6.94□□□□□ -1.3
VPS61YDR136C ANP1P32629 500 aa6.94□□□□□ -1.3
VPS61YDR136C STO1P34160 861 aaKnown RBP6.94□□□□□ -1.3
VPS61YDR136C YET1P35723 206 aa6.94□□□□□ -1.3
VPS61YDR136C MYO3P36006 1272 aa6.94□□□□□ -1.3
VPS61YDR136C SHM1P37292 490 aaPredicted RBP6.94□□□□□ -1.3
VPS61YDR136C REI1P38344 393 aaPredicted RBP6.94□□□□□ -1.3
VPS61YDR136C EFM2P38347 419 aa6.94□□□□□ -1.3
VPS61YDR136C CCT4P39078 528 aaKnown RBP6.94□□□□□ -1.3
VPS61YDR136C YIR042CP40586 236 aa6.94□□□□□ -1.3
VPS61YDR136C ERG5P54781 538 aa6.94□□□□□ -1.3
VPS61YDR136C RAT1Q02792 1006 aaKnown RBP6.94□□□□□ -1.3
VPS61YDR136C ATG23Q06671 453 aa6.94□□□□□ -1.3
VPS61YDR136C LAM6Q08001 693 aa6.94□□□□□ -1.3
VPS61YDR136C DPH6Q12429 685 aa6.94□□□□□ -1.3
VPS61YDR136C CEX1Q12453 761 aa6.94□□□□□ -1.3
VPS61YDR136C YOL098CQ12496 1037 aa6.94□□□□□ -1.3
VPS61YDR136C NBL1Q3E7Y6 73 aa6.94□□□□□ -1.3
VPS61YDR136C YOR111WQ99210 232 aa6.94□□□□□ -1.3
VPS61YDR136C YOL087CQ99247 1116 aa6.94□□□□□ -1.3
VPS61YDR136C PMD1P32634 1753 aa6.93□□□□□ -1.3
VPS61YDR136C SIT4P20604 311 aa6.93□□□□□ -1.3
VPS61YDR136C MGM1P32266 881 aa6.93□□□□□ -1.3
VPS61YDR136C HIR1P32479 840 aa6.93□□□□□ -1.3
VPS61YDR136C MAL31P38156 614 aa6.93□□□□□ -1.3
VPS61YDR136C MCX1P38323 520 aaPredicted RBP6.93□□□□□ -1.3
VPS61YDR136C YHL050CP38721 697 aa6.93□□□□□ -1.3
VPS61YDR136C PCI8P40512 444 aa6.93□□□□□ -1.3
VPS61YDR136C PTK2P47116 818 aaKnown RBP6.93□□□□□ -1.3
VPS61YDR136C CSN12P47130 423 aa6.93□□□□□ -1.3
VPS61YDR136C FPK1P53739 893 aa6.93□□□□□ -1.3
VPS61YDR136C BOP3P53958 396 aa6.93□□□□□ -1.3
VPS61YDR136C ATG9Q12142 997 aa6.93□□□□□ -1.3
VPS61YDR136C CDC37P06101 506 aaKnown RBP6.92□□□□□ -1.3
VPS61YDR136C RAM1P22007 431 aa6.92□□□□□ -1.3
VPS61YDR136C PRP40P33203 583 aaKnown RBP6.92□□□□□ -1.3
VPS61YDR136C CTM1P38818 585 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms