RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W PUS5Q06244 254 aa7.07□□□□□ -1.28
SLX5YDL013W FRT1Q99332 602 aa7.07□□□□□ -1.28
SLX5YDL013W OCA1P50946 238 aaPredicted RBP7.07□□□□□ -1.28
SLX5YDL013W ATG26Q06321 1198 aa7.07□□□□□ -1.28
SLX5YDL013W MDM38Q08179 573 aa7.07□□□□□ -1.28
SLX5YDL013W LSO1Q3E827 93 aa7.07□□□□□ -1.28
SLX5YDL013W BRR1Q99177 341 aaPredicted RBP7.07□□□□□ -1.28
SLX5YDL013W SWI5P08153 709 aa7.06□□□□□ -1.28
SLX5YDL013W SEC23P15303 768 aaKnown RBP7.06□□□□□ -1.28
SLX5YDL013W NGR1P32831 672 aaKnown RBP7.06□□□□□ -1.28
SLX5YDL013W MET1P36150 593 aa7.06□□□□□ -1.28
SLX5YDL013W ITC1P53125 1264 aa7.06□□□□□ -1.28
SLX5YDL013W PXR1P53335 271 aaPredicted RBP7.06□□□□□ -1.28
SLX5YDL013W ISU1Q03020 165 aa7.06□□□□□ -1.28
SLX5YDL013W CLP1Q08685 445 aaPredicted RBP7.06□□□□□ -1.28
SLX5YDL013W DNF3Q12674 1656 aa7.06□□□□□ -1.28
SLX5YDL013W CYB2P00175 591 aa7.05□□□□□ -1.28
SLX5YDL013W ECM1P39715 212 aa7.05□□□□□ -1.28
SLX5YDL013W CHZ1P40019 153 aaPredicted RBP7.05□□□□□ -1.28
SLX5YDL013W YJL171CP46992 396 aa7.05□□□□□ -1.28
SLX5YDL013W DNM1P54861 757 aa7.05□□□□□ -1.28
SLX5YDL013W REX2P54964 269 aaKnown RBP7.05□□□□□ -1.28
SLX5YDL013W PHM6Q05637 104 aa7.05□□□□□ -1.28
SLX5YDL013W PUP2P32379 260 aa7.04□□□□□ -1.28
SLX5YDL013W EFM2P38347 419 aa7.04□□□□□ -1.28
SLX5YDL013W BTN2P53286 410 aa7.04□□□□□ -1.28
SLX5YDL013W YML119WQ03208 357 aa7.04□□□□□ -1.28
SLX5YDL013W TCB1Q12466 1186 aa7.04□□□□□ -1.28
SLX5YDL013W UTR2P32623 467 aa7.04□□□□□ -1.28
SLX5YDL013W BEM4P39011 633 aa7.04□□□□□ -1.28
SLX5YDL013W MRD1Q06106 887 aaKnown RBP7.04□□□□□ -1.28
SLX5YDL013W NKP1Q12493 238 aa7.04□□□□□ -1.28
SLX5YDL013W UGA3P26370 528 aa7.03□□□□□ -1.28
SLX5YDL013W FBP26P32604 452 aa7.03□□□□□ -1.28
SLX5YDL013W BOI1P38041 980 aaKnown RBP7.03□□□□□ -1.28
SLX5YDL013W UBP12P39538 1254 aa7.03□□□□□ -1.28
SLX5YDL013W DSL1P53847 754 aa7.03□□□□□ -1.28
SLX5YDL013W YOL057WQ08225 711 aa7.03□□□□□ -1.28
SLX5YDL013W RKM4Q12504 494 aa7.03□□□□□ -1.28
SLX5YDL013W EXO84P38261 753 aa7.02□□□□□ -1.28
SLX5YDL013W YBR197CP38306 217 aa7.02□□□□□ -1.28
SLX5YDL013W YDR338CQ05497 695 aa7.02□□□□□ -1.28
SLX5YDL013W HMI1Q12039 706 aa7.02□□□□□ -1.28
SLX5YDL013W VMR1P38735 1592 aa7.02□□□□□ -1.29
SLX5YDL013W HMG1P12683 1054 aa7.02□□□□□ -1.29
SLX5YDL013W DAT1P13483 248 aaKnown RBP7.02□□□□□ -1.29
SLX5YDL013W MET4P32389 672 aa7.02□□□□□ -1.29
SLX5YDL013W SEC8P32855 1065 aa7.02□□□□□ -1.29
SLX5YDL013W MKS1P34072 584 aa7.02□□□□□ -1.29
SLX5YDL013W COY1P34237 679 aa7.02□□□□□ -1.29
SLX5YDL013W SDS3P40505 327 aa7.02□□□□□ -1.29
SLX5YDL013W HEH2Q03281 663 aa7.02□□□□□ -1.29
SLX5YDL013W VTI1Q04338 217 aa7.02□□□□□ -1.29
SLX5YDL013W TSR4P25040 408 aa7.01□□□□□ -1.29
SLX5YDL013W NIP100P33420 868 aa7.01□□□□□ -1.29
SLX5YDL013W ESL2P36168 1195 aa7.01□□□□□ -1.29
SLX5YDL013W YAP3P38749 330 aa7.01□□□□□ -1.29
SLX5YDL013W BUD27P43573 796 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
SLX5YDL013W OYE2Q03558 400 aaKnown RBP7.01□□□□□ -1.29
SLX5YDL013W SPO71Q03868 1245 aa7.01□□□□□ -1.29
SLX5YDL013W KAR1P11927 433 aa7□□□□□ -1.29
SLX5YDL013W ISC10P32645 267 aa7□□□□□ -1.29
SLX5YDL013W TBS1P38114 1094 aa7□□□□□ -1.29
SLX5YDL013W MGE1P38523 228 aa7□□□□□ -1.29
SLX5YDL013W YLF2P38746 405 aa7□□□□□ -1.29
SLX5YDL013W ETP1P38748 585 aaKnown RBP7□□□□□ -1.29
SLX5YDL013W IAH1P41734 238 aa7□□□□□ -1.29
SLX5YDL013W SPR3P41901 512 aa7□□□□□ -1.29
SLX5YDL013W FRK1Q03002 865 aaPredicted RBP7□□□□□ -1.29
SLX5YDL013W DBP10Q12389 995 aaKnown RBP7□□□□□ -1.29
SLX5YDL013W STB3Q12427 513 aa7□□□□□ -1.29
SLX5YDL013W NUP188P52593 1655 aaKnown RBP7□□□□□ -1.29
SLX5YDL013W SDH2P21801 266 aa7□□□□□ -1.29
SLX5YDL013W BUD14P27637 709 aa7□□□□□ -1.29
SLX5YDL013W RPN12P32496 274 aa7□□□□□ -1.29
SLX5YDL013W TFC3P34111 1160 aa7□□□□□ -1.29
SLX5YDL013W YTA6P40328 754 aa7□□□□□ -1.29
SLX5YDL013W FOX2Q02207 900 aaKnown RBP7□□□□□ -1.29
SLX5YDL013W TRS120Q04183 1289 aa7□□□□□ -1.29
SLX5YDL013W CAB1Q04430 367 aa7□□□□□ -1.29
SLX5YDL013W SMD2Q06217 110 aaKnown RBP7□□□□□ -1.29
SLX5YDL013W FAR1P21268 830 aa6.99□□□□□ -1.29
SLX5YDL013W TIF3P34167 436 aaKnown RBP6.99□□□□□ -1.29
SLX5YDL013W SAS3P34218 831 aa6.99□□□□□ -1.29
SLX5YDL013W ATG19P35193 415 aa6.99□□□□□ -1.29
SLX5YDL013W PMT7Q06644 662 aa6.99□□□□□ -1.29
SLX5YDL013W RAD3P06839 778 aa6.98□□□□□ -1.29
SLX5YDL013W PHO84P25297 587 aaKnown RBP6.98□□□□□ -1.29
SLX5YDL013W HIR2P32480 875 aa6.98□□□□□ -1.29
SLX5YDL013W MAM1P40065 302 aa6.98□□□□□ -1.29
SLX5YDL013W CST6P40535 587 aa6.98□□□□□ -1.29
SLX5YDL013W YNL050CP53952 270 aa6.98□□□□□ -1.29
SLX5YDL013W PNG1Q02890 363 aa6.98□□□□□ -1.29
SLX5YDL013W STE6P12866 1290 aa6.98□□□□□ -1.29
SLX5YDL013W APN1P22936 367 aa6.98□□□□□ -1.29
SLX5YDL013W ARB1P40024 610 aaKnown RBP6.98□□□□□ -1.29
SLX5YDL013W RAD17P48581 401 aa6.98□□□□□ -1.29
SLX5YDL013W SVF1Q05515 481 aa6.98□□□□□ -1.29
SLX5YDL013W PRS1P32895 427 aaKnown RBP6.97□□□□□ -1.29
SLX5YDL013W MRT4P33201 236 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 96.6 ms