RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	VPS30	Q02948	557 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	GYL1	Q04322	720 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	FLO1	P32768	1537 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	RDS1	P25611	832 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	MAL33	P38157	468 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	RFC5	P38251	354 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	RTS1	P38903	757 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	PIP2	P52960	996 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	DPL1	Q05567	589 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	YCG1	Q06680	1035 aa		5.72	□□□□□ -1.49
PDI1	YCL043C	ANP1	P32629	500 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	MYO3	P36006	1272 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	PAM1	P37304	830 aa	Known RBP	5.71	□□□□□ -1.5
PDI1	YCL043C	BUD6	P41697	788 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	CTK3	P46963	296 aa	Predicted RBP	5.71	□□□□□ -1.5
PDI1	YCL043C	PUS6	P53294	404 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	MAL13	P53338	473 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	MRD1	Q06106	887 aa	Known RBP	5.71	□□□□□ -1.5
PDI1	YCL043C	TFC6	Q06339	672 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	OMS1	Q06668	471 aa		5.71	□□□□□ -1.5
PDI1	YCL043C	COX6	P00427	148 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	MPH3	P0CE00	602 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
PDI1	YCL043C	RPS7A	P26786	190 aa	Known RBP	5.7	□□□□□ -1.5
PDI1	YCL043C	DPB3	P27344	201 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	MUD2	P36084	527 aa	Known RBP	5.7	□□□□□ -1.5
PDI1	YCL043C	BCH2	P36122	765 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	AKR1	P39010	764 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	TIF4632	P39936	914 aa	Known RBP	5.7	□□□□□ -1.5
PDI1	YCL043C	YER156C	P40093	338 aa	Known RBP	5.7	□□□□□ -1.5
PDI1	YCL043C	APL6	P46682	809 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	RPL34A	P87262	121 aa	Predicted RBP	5.7	□□□□□ -1.5
PDI1	YCL043C	RBA50	Q04418	439 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	YPL225W	Q08971	146 aa	Known RBP	5.7	□□□□□ -1.5
PDI1	YCL043C	FLO11	P08640	1367 aa		5.7	□□□□□ -1.5
PDI1	YCL043C	HCA4	P20448	770 aa	Known RBP	5.69	□□□□□ -1.5
PDI1	YCL043C	PRO3	P32263	286 aa	Known RBP	5.69	□□□□□ -1.5
PDI1	YCL043C	YEL043W	P32618	956 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	RRN6	P32786	894 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	YGL015C	P33199	130 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	CCT4	P39078	528 aa	Known RBP	5.69	□□□□□ -1.5
PDI1	YCL043C	VID27	P40157	782 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	MDM38	Q08179	573 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	YPL260W	Q08977	551 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	ATG9	Q12142	997 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	RRG1	Q12167	365 aa	Predicted RBP	5.69	□□□□□ -1.5
PDI1	YCL043C	RAD61	Q99359	647 aa		5.69	□□□□□ -1.5
PDI1	YCL043C	TOP1	P04786	769 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	GPA1	P08539	472 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	CBP3	P21560	335 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	MAK31	P23059	88 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	RIT1	P23796	513 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	SWI4	P25302	1093 aa	Known RBP	5.68	□□□□□ -1.5
PDI1	YCL043C	RAD51	P25454	400 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	AFG2	P32794	780 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	RPN10	P38886	268 aa	Known RBP	5.68	□□□□□ -1.5
PDI1	YCL043C	YPT11	P48559	417 aa		5.68	□□□□□ -1.5
PDI1	YCL043C	ACK1	Q07622	623 aa	Predicted RBP	5.68	□□□□□ -1.5
PDI1	YCL043C	PGI1	P12709	554 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	RPO26	P20435	155 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	UBC1	P21734	215 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	SPT5	P27692	1063 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	BMH2	P34730	273 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	RGD1	P38339	666 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	SHC1	P39000	512 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	CAJ1	P39101	391 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	VPS8	P39702	1274 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	YER130C	P39959	443 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	NDC80	P40460	691 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	CSM2	P40465	213 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	APT1	P49435	187 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	YNL035C	P53962	389 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	WAR1	Q03631	944 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	KEL3	Q08979	651 aa	Predicted RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	DCS2	Q12123	353 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	ERG12	P07277	443 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	CDC6	P09119	513 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	VPS1	P21576	704 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	SEC14	P24280	304 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	GSY2	P27472	705 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	NFU1	P32860	256 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	MAL31	P38156	614 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	REI1	P38344	393 aa	Predicted RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	SPT8	P38915	602 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	RPL34B	P40525	121 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	OSW7	P43611	510 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	YJL171C	P46992	396 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	CSN12	P47130	423 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	VPS75	P53853	264 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	ALF1	P53904	254 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	RRB1	Q04225	511 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	MYO5	Q04439	1219 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	RUD3	Q12234	484 aa	Known RBP	5.67	□□□□□ -1.5
PDI1	YCL043C	MCM16	Q12262	181 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	YOR111W	Q99210	232 aa		5.67	□□□□□ -1.5
PDI1	YCL043C	TIF1	P10081	395 aa	Known RBP	5.66	□□□□□ -1.5
PDI1	YCL043C	RNR3	P21672	869 aa	Known RBP	5.66	□□□□□ -1.5
PDI1	YCL043C	HEM3	P28789	327 aa		5.66	□□□□□ -1.5
PDI1	YCL043C	CDC3	P32457	520 aa	Known RBP	5.66	□□□□□ -1.5
PDI1	YCL043C	RFT1	P38206	574 aa	Predicted RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms