RNA–Protein interactions for RNA: ENST00000513398.1

ACTN3-203, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN3, Length 2,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-203ENST00000513398 EYA1Q99502 592 aa22.42■■□□□ 1.18
ACTN3-203ENST00000513398 TRAK2O60296 914 aa22.42■■□□□ 1.18
ACTN3-203ENST00000513398 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
ACTN3-203ENST00000513398 ZKSCAN2Q63HK3 967 aa22.41■■□□□ 1.18
ACTN3-203ENST00000513398 TRIM35Q9UPQ4 493 aa22.41■■□□□ 1.18
ACTN3-203ENST00000513398 PIK3C2AO00443 1686 aa22.41■■□□□ 1.18
ACTN3-203ENST00000513398 PIP4K2BP78356 416 aa22.41■■□□□ 1.18
ACTN3-203ENST00000513398 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
ACTN3-203ENST00000513398 AATKQ6ZMQ8 1374 aa22.4■■□□□ 1.18
ACTN3-203ENST00000513398 FCHSD2O94868 740 aa22.4■■□□□ 1.18
ACTN3-203ENST00000513398 DZIP1LQ8IYY4 767 aaKnown RBP22.4■■□□□ 1.18
ACTN3-203ENST00000513398 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
ACTN3-203ENST00000513398 NAP1L5Q96NT1 182 aaPredicted RBP22.4■■□□□ 1.18
ACTN3-203ENST00000513398 LRRC7Q96NW7 1537 aa22.39■■□□□ 1.18
ACTN3-203ENST00000513398 NRKQ7Z2Y5 1582 aa22.39■■□□□ 1.18
ACTN3-203ENST00000513398 CCDC27Q2M243 656 aa22.39■■□□□ 1.18
ACTN3-203ENST00000513398 NWD1Q149M9 1564 aa22.39■■□□□ 1.17
ACTN3-203ENST00000513398 ANKRD26Q9UPS8 1709 aa22.39■■□□□ 1.17
ACTN3-203ENST00000513398 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
ACTN3-203ENST00000513398 MCM10Q7L590 875 aa22.38■■□□□ 1.17
ACTN3-203ENST00000513398 HSCBQ8IWL3 235 aa22.38■■□□□ 1.17
ACTN3-203ENST00000513398 USP31Q70CQ4 1352 aa22.37■■□□□ 1.17
ACTN3-203ENST00000513398 MIS18AQ9NYP9 233 aa22.37■■□□□ 1.17
ACTN3-203ENST00000513398 MRE11P49959 708 aa22.36■■□□□ 1.17
ACTN3-203ENST00000513398 CLCN1P35523 988 aa22.35■■□□□ 1.17
ACTN3-203ENST00000513398 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
ACTN3-203ENST00000513398 FLT4P35916 1363 aa22.35■■□□□ 1.17
ACTN3-203ENST00000513398 NBPF6Q5VWK0 638 aa22.34■■□□□ 1.17
ACTN3-203ENST00000513398 NBPF4Q96M43 638 aa22.34■■□□□ 1.17
ACTN3-203ENST00000513398 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
ACTN3-203ENST00000513398 NPHP3Q7Z494 1330 aa22.34■■□□□ 1.17
ACTN3-203ENST00000513398 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
ACTN3-203ENST00000513398 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.17
ACTN3-203ENST00000513398 SBNO1A3KN83 1393 aa22.33■■□□□ 1.16
ACTN3-203ENST00000513398 ITPRIPQ8IWB1 547 aa22.33■■□□□ 1.16
ACTN3-203ENST00000513398 HDAC1Q13547 482 aaPredicted RBP22.31■■□□□ 1.16
ACTN3-203ENST00000513398 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
ACTN3-203ENST00000513398 NFE2L2Q16236 605 aa22.31■■□□□ 1.16
ACTN3-203ENST00000513398 TRIM27P14373 513 aa22.3■■□□□ 1.16
ACTN3-203ENST00000513398 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
ACTN3-203ENST00000513398 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
ACTN3-203ENST00000513398 GRPEL1Q9HAV7 217 aa22.3■■□□□ 1.16
ACTN3-203ENST00000513398 DDX19BQ9UMR2 479 aa22.3■■□□□ 1.16
ACTN3-203ENST00000513398 CSB-PGBD3P0DP91 1061 aa22.29■■□□□ 1.16
ACTN3-203ENST00000513398 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
ACTN3-203ENST00000513398 KRT24Q2M2I5 525 aa22.29■■□□□ 1.16
ACTN3-203ENST00000513398 KCNH5Q8NCM2 988 aa22.29■■□□□ 1.16
ACTN3-203ENST00000513398 ARHGEF25Q86VW2 580 aa22.28■■□□□ 1.16
ACTN3-203ENST00000513398 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
ACTN3-203ENST00000513398 IP6K1Q92551 441 aa22.28■■□□□ 1.16
ACTN3-203ENST00000513398 NLRP2Q9NX02 1062 aa22.27■■□□□ 1.16
ACTN3-203ENST00000513398 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.15
ACTN3-203ENST00000513398 SMC5Q8IY18 1101 aa22.27■■□□□ 1.15
ACTN3-203ENST00000513398 SSH1Q8WYL5 1049 aa22.27■■□□□ 1.15
ACTN3-203ENST00000513398 XIRP1Q702N8 1843 aaKnown RBP22.26■■□□□ 1.15
ACTN3-203ENST00000513398 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
ACTN3-203ENST00000513398 STRN4Q9NRL3 753 aa22.24■■□□□ 1.15
ACTN3-203ENST00000513398 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
ACTN3-203ENST00000513398 SPATA31A3Q5VYP0 1347 aa22.24■■□□□ 1.15
ACTN3-203ENST00000513398 NCOA3Q9Y6Q9 1424 aa22.24■■□□□ 1.15
ACTN3-203ENST00000513398 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
ACTN3-203ENST00000513398 HSP90AB1P08238 724 aaKnown RBP22.23■■□□□ 1.15
ACTN3-203ENST00000513398 NOB1Q9ULX3 412 aaKnown RBP22.23■■□□□ 1.15
ACTN3-203ENST00000513398 HSP90AA1P07900 732 aaKnown RBP22.23■■□□□ 1.15
ACTN3-203ENST00000513398 TMEM57Q8N5G2 664 aa22.23■■□□□ 1.15
ACTN3-203ENST00000513398 KIAA0232Q92628 1395 aa22.22■■□□□ 1.15
ACTN3-203ENST00000513398 ESPNB1AK53 854 aa22.22■■□□□ 1.15
ACTN3-203ENST00000513398 TNPO1Q92973 898 aaKnown RBP22.22■■□□□ 1.15
ACTN3-203ENST00000513398 PRDM11Q9NQV5 511 aa22.22■■□□□ 1.15
ACTN3-203ENST00000513398 DDIT3P35638 169 aa22.22■■□□□ 1.15
ACTN3-203ENST00000513398 RBM25P49756 843 aaKnown RBP22.22■■□□□ 1.15
ACTN3-203ENST00000513398 SNX21Q969T3 373 aa22.21■■□□□ 1.15
ACTN3-203ENST00000513398 GLIPR1L2Q4G1C9 344 aa22.21■■□□□ 1.15
ACTN3-203ENST00000513398 LNPKQ9C0E8 428 aa22.21■■□□□ 1.15
ACTN3-203ENST00000513398 IGSF1Q8N6C5 1336 aa22.21■■□□□ 1.15
ACTN3-203ENST00000513398 GBP4Q96PP9 640 aa22.2■■□□□ 1.15
ACTN3-203ENST00000513398 TRIM44Q96DX7 344 aaPredicted RBP22.2■■□□□ 1.14
ACTN3-203ENST00000513398 MBIPQ9NS73 344 aa22.2■■□□□ 1.14
ACTN3-203ENST00000513398 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
ACTN3-203ENST00000513398 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
ACTN3-203ENST00000513398 NUTM2BA6NNL0 878 aaPredicted RBP22.19■■□□□ 1.14
ACTN3-203ENST00000513398 NUTM2EB1AL46 878 aaPredicted RBP22.19■■□□□ 1.14
ACTN3-203ENST00000513398 NUTM2AQ8IVF1 878 aaPredicted RBP22.19■■□□□ 1.14
ACTN3-203ENST00000513398 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
ACTN3-203ENST00000513398 CIZ1Q9ULV3 898 aaPredicted RBP22.19■■□□□ 1.14
ACTN3-203ENST00000513398 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
ACTN3-203ENST00000513398 ERBB4Q15303 1308 aa22.18■■□□□ 1.14
ACTN3-203ENST00000513398 DCCP43146 1447 aa22.18■■□□□ 1.14
ACTN3-203ENST00000513398 NUCB1Q02818 461 aa22.18■■□□□ 1.14
ACTN3-203ENST00000513398 ADAMTS2O95450 1211 aa22.17■■□□□ 1.14
ACTN3-203ENST00000513398 HSP90AA2PQ14568 343 aaPredicted RBP22.17■■□□□ 1.14
ACTN3-203ENST00000513398 MPRIPQ6WCQ1 1025 aa22.17■■□□□ 1.14
ACTN3-203ENST00000513398 GAS2L3Q86XJ1 694 aa22.17■■□□□ 1.14
ACTN3-203ENST00000513398 TNS3Q68CZ2 1445 aa22.16■■□□□ 1.14
ACTN3-203ENST00000513398 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
ACTN3-203ENST00000513398 KIF16BQ96L93 1317 aa22.16■■□□□ 1.14
ACTN3-203ENST00000513398 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
ACTN3-203ENST00000513398 C8orf58Q8NAV2 365 aa22.15■■□□□ 1.14
ACTN3-203ENST00000513398 FOXD4L1Q9NU39 408 aa22.15■■□□□ 1.14
ACTN3-203ENST00000513398 NFAT5O94916 1531 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms