RNA–Protein interactions for RNA: ENST00000513398.1

ACTN3-203, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN3, Length 2,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-203ENST00000513398 NISCHQ9Y2I1 1504 aa38.23■■■■□ 3.71
ACTN3-203ENST00000513398 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
ACTN3-203ENST00000513398 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
ACTN3-203ENST00000513398 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
ACTN3-203ENST00000513398 ABCC9O60706 1549 aa32.12■■■□□ 2.73
ACTN3-203ENST00000513398 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
ACTN3-203ENST00000513398 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
ACTN3-203ENST00000513398 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
ACTN3-203ENST00000513398 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
ACTN3-203ENST00000513398 NACADO15069 1562 aa30.81■■■□□ 2.52
ACTN3-203ENST00000513398 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
ACTN3-203ENST00000513398 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
ACTN3-203ENST00000513398 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
ACTN3-203ENST00000513398 CECR2Q9BXF3 1484 aa30.11■■■□□ 2.41
ACTN3-203ENST00000513398 UNC13AQ9UPW8 1703 aa30.11■■■□□ 2.41
ACTN3-203ENST00000513398 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
ACTN3-203ENST00000513398 RSF1Q96T23 1441 aaPredicted RBP29.84■■■□□ 2.37
ACTN3-203ENST00000513398 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
ACTN3-203ENST00000513398 HRCP23327 699 aa29.64■■■□□ 2.33
ACTN3-203ENST00000513398 WIZO95785 1651 aa29.53■■■□□ 2.32
ACTN3-203ENST00000513398 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
ACTN3-203ENST00000513398 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
ACTN3-203ENST00000513398 SMARCA4P51532 1647 aa29.35■■■□□ 2.29
ACTN3-203ENST00000513398 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.27
ACTN3-203ENST00000513398 EIF4G1Q04637 1599 aaKnown RBP29.04■■■□□ 2.24
ACTN3-203ENST00000513398 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
ACTN3-203ENST00000513398 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
ACTN3-203ENST00000513398 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
ACTN3-203ENST00000513398 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
ACTN3-203ENST00000513398 BAZ1BQ9UIG0 1483 aaKnown RBP28.9■■■□□ 2.22
ACTN3-203ENST00000513398 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
ACTN3-203ENST00000513398 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
ACTN3-203ENST00000513398 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
ACTN3-203ENST00000513398 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
ACTN3-203ENST00000513398 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
ACTN3-203ENST00000513398 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
ACTN3-203ENST00000513398 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
ACTN3-203ENST00000513398 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
ACTN3-203ENST00000513398 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
ACTN3-203ENST00000513398 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
ACTN3-203ENST00000513398 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
ACTN3-203ENST00000513398 HMGXB3Q12766 1538 aa28.38■■■□□ 2.13
ACTN3-203ENST00000513398 NESP48681 1621 aa28.17■■■□□ 2.1
ACTN3-203ENST00000513398 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
ACTN3-203ENST00000513398 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
ACTN3-203ENST00000513398 CADPSQ9ULU8 1353 aa28.07■■■□□ 2.08
ACTN3-203ENST00000513398 CFTRP13569 1480 aa28.03■■■□□ 2.08
ACTN3-203ENST00000513398 SOGA1O94964 1423 aa28.01■■■□□ 2.07
ACTN3-203ENST00000513398 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
ACTN3-203ENST00000513398 SYNJ1O43426 1573 aa27.96■■■□□ 2.07
ACTN3-203ENST00000513398 PELP1Q8IZL8 1130 aaKnown RBP27.86■■■□□ 2.05
ACTN3-203ENST00000513398 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
ACTN3-203ENST00000513398 RANGAP1P46060 587 aaPredicted RBP27.8■■■□□ 2.04
ACTN3-203ENST00000513398 CUX1P39880 1505 aa27.76■■■□□ 2.03
ACTN3-203ENST00000513398 SCAF1Q9H7N4 1312 aaKnown RBP27.72■■■□□ 2.03
ACTN3-203ENST00000513398 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
ACTN3-203ENST00000513398 UBTFP17480 764 aaKnown RBP27.69■■■□□ 2.02
ACTN3-203ENST00000513398 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
ACTN3-203ENST00000513398 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
ACTN3-203ENST00000513398 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
ACTN3-203ENST00000513398 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
ACTN3-203ENST00000513398 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
ACTN3-203ENST00000513398 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
ACTN3-203ENST00000513398 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
ACTN3-203ENST00000513398 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
ACTN3-203ENST00000513398 PRDM2Q13029 1718 aa27.45■■□□□ 1.98
ACTN3-203ENST00000513398 CUX2O14529 1486 aa27.45■■□□□ 1.98
ACTN3-203ENST00000513398 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
ACTN3-203ENST00000513398 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
ACTN3-203ENST00000513398 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
ACTN3-203ENST00000513398 ERCC6Q03468 1493 aa27.42■■□□□ 1.98
ACTN3-203ENST00000513398 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
ACTN3-203ENST00000513398 POLA1P09884 1462 aaPredicted RBP27.36■■□□□ 1.97
ACTN3-203ENST00000513398 RAPGEF2Q9Y4G8 1499 aa27.33■■□□□ 1.97
ACTN3-203ENST00000513398 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
ACTN3-203ENST00000513398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
ACTN3-203ENST00000513398 EEA1Q15075 1411 aa27.3■■□□□ 1.96
ACTN3-203ENST00000513398 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
ACTN3-203ENST00000513398 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
ACTN3-203ENST00000513398 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
ACTN3-203ENST00000513398 IGF1RP08069 1367 aa27.21■■□□□ 1.95
ACTN3-203ENST00000513398 GOLGA3Q08378 1498 aa27.2■■□□□ 1.95
ACTN3-203ENST00000513398 CEP162Q5TB80 1403 aa27.16■■□□□ 1.94
ACTN3-203ENST00000513398 NEUROD1Q13562 356 aa27.16■■□□□ 1.94
ACTN3-203ENST00000513398 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
ACTN3-203ENST00000513398 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
ACTN3-203ENST00000513398 TNIKQ9UKE5 1360 aa27.11■■□□□ 1.93
ACTN3-203ENST00000513398 CARMIL1Q5VZK9 1371 aa27.1■■□□□ 1.93
ACTN3-203ENST00000513398 P3H3Q8IVL6 736 aa27.07■■□□□ 1.92
ACTN3-203ENST00000513398 DIEXFQ68CQ4 756 aaKnown RBP27.05■■□□□ 1.92
ACTN3-203ENST00000513398 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
ACTN3-203ENST00000513398 PRXQ9BXM0 1461 aa27.04■■□□□ 1.92
ACTN3-203ENST00000513398 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
ACTN3-203ENST00000513398 CENPBP07199 599 aaPredicted RBP27.02■■□□□ 1.92
ACTN3-203ENST00000513398 FBLN2P98095 1184 aa27.02■■□□□ 1.92
ACTN3-203ENST00000513398 GAPVD1Q14C86 1478 aa26.97■■□□□ 1.91
ACTN3-203ENST00000513398 KIF21BO75037 1637 aa26.97■■□□□ 1.91
ACTN3-203ENST00000513398 GTF3C3Q9Y5Q9 886 aa26.97■■□□□ 1.91
ACTN3-203ENST00000513398 CLIP1P30622 1438 aa26.96■■□□□ 1.91
ACTN3-203ENST00000513398 WDR62O43379 1518 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms