RNA–Protein interactions for RNA: ENST00000492595.5

SEC22A-210, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 972 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-210ENST00000492595 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
SEC22A-210ENST00000492595 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
SEC22A-210ENST00000492595 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
SEC22A-210ENST00000492595 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
SEC22A-210ENST00000492595 CARD10Q9BWT7 1032 aa13.25□□□□□ -0.29
SEC22A-210ENST00000492595 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
SEC22A-210ENST00000492595 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
SEC22A-210ENST00000492595 NLRP6P59044 892 aa13.24□□□□□ -0.29
SEC22A-210ENST00000492595 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
SEC22A-210ENST00000492595 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
SEC22A-210ENST00000492595 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
SEC22A-210ENST00000492595 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
SEC22A-210ENST00000492595 ZNF827Q17R98 1081 aa13.22□□□□□ -0.29
SEC22A-210ENST00000492595 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
SEC22A-210ENST00000492595 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
SEC22A-210ENST00000492595 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
SEC22A-210ENST00000492595 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.29
SEC22A-210ENST00000492595 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
SEC22A-210ENST00000492595 ACSBG1Q96GR2 724 aa13.21□□□□□ -0.29
SEC22A-210ENST00000492595 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
SEC22A-210ENST00000492595 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
SEC22A-210ENST00000492595 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
SEC22A-210ENST00000492595 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
SEC22A-210ENST00000492595 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
SEC22A-210ENST00000492595 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
SEC22A-210ENST00000492595 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
SEC22A-210ENST00000492595 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
SEC22A-210ENST00000492595 APLP1P51693 650 aa13.18□□□□□ -0.3
SEC22A-210ENST00000492595 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
SEC22A-210ENST00000492595 USP6P35125 1406 aa13.18□□□□□ -0.3
SEC22A-210ENST00000492595 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
SEC22A-210ENST00000492595 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
SEC22A-210ENST00000492595 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
SEC22A-210ENST00000492595 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
SEC22A-210ENST00000492595 TIE1P35590 1138 aa13.16□□□□□ -0.3
SEC22A-210ENST00000492595 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
SEC22A-210ENST00000492595 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
SEC22A-210ENST00000492595 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
SEC22A-210ENST00000492595 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
SEC22A-210ENST00000492595 CPSF1Q10570 1443 aaKnown RBP13.15□□□□□ -0.3
SEC22A-210ENST00000492595 AKAP12Q02952 1782 aa13.15□□□□□ -0.31
SEC22A-210ENST00000492595 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
SEC22A-210ENST00000492595 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
SEC22A-210ENST00000492595 SLIT3O75094 1523 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
SEC22A-210ENST00000492595 IL2RBP14784 551 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
SEC22A-210ENST00000492595 CABP1Q9NZU7 370 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
SEC22A-210ENST00000492595 SOX12O15370 315 aa13.12□□□□□ -0.31
SEC22A-210ENST00000492595 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
SEC22A-210ENST00000492595 ADCY9O60503 1353 aa13.11□□□□□ -0.31
SEC22A-210ENST00000492595 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
SEC22A-210ENST00000492595 NLRP2Q9NX02 1062 aa13.11□□□□□ -0.31
SEC22A-210ENST00000492595 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
SEC22A-210ENST00000492595 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
SEC22A-210ENST00000492595 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
SEC22A-210ENST00000492595 ABCC6O95255 1503 aa13.09□□□□□ -0.31
SEC22A-210ENST00000492595 TTLL13PA6NNM8 815 aa13.09□□□□□ -0.31
SEC22A-210ENST00000492595 KIF3CO14782 793 aa13.09□□□□□ -0.31
SEC22A-210ENST00000492595 COL18A1P39060 1754 aa13.08□□□□□ -0.32
SEC22A-210ENST00000492595 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
SEC22A-210ENST00000492595 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
SEC22A-210ENST00000492595 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
SEC22A-210ENST00000492595 TOMM70O94826 608 aa13.07□□□□□ -0.32
SEC22A-210ENST00000492595 PRELPP51888 382 aa13.07□□□□□ -0.32
SEC22A-210ENST00000492595 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
SEC22A-210ENST00000492595 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
SEC22A-210ENST00000492595 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
SEC22A-210ENST00000492595 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
SEC22A-210ENST00000492595 KCNQ4P56696 695 aa13.06□□□□□ -0.32
SEC22A-210ENST00000492595 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
SEC22A-210ENST00000492595 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
SEC22A-210ENST00000492595 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
SEC22A-210ENST00000492595 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
SEC22A-210ENST00000492595 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
SEC22A-210ENST00000492595 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
SEC22A-210ENST00000492595 ERBB3P21860 1342 aa13.06□□□□□ -0.32
SEC22A-210ENST00000492595 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
SEC22A-210ENST00000492595 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
SEC22A-210ENST00000492595 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
SEC22A-210ENST00000492595 COL24A1Q17RW2 1714 aa13.04□□□□□ -0.32
SEC22A-210ENST00000492595 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
SEC22A-210ENST00000492595 BTAF1O14981 1849 aa13.04□□□□□ -0.32
SEC22A-210ENST00000492595 EVC2Q86UK5 1308 aa13.03□□□□□ -0.32
SEC22A-210ENST00000492595 ANKRD24Q8TF21 1146 aa13.02□□□□□ -0.33
SEC22A-210ENST00000492595 KLRG1Q96E93 195 aa13.02□□□□□ -0.33
SEC22A-210ENST00000492595 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
SEC22A-210ENST00000492595 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.33
SEC22A-210ENST00000492595 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
SEC22A-210ENST00000492595 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
SEC22A-210ENST00000492595 NBPF1Q3BBV0 1214 aa13.01□□□□□ -0.33
SEC22A-210ENST00000492595 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
SEC22A-210ENST00000492595 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
SEC22A-210ENST00000492595 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
SEC22A-210ENST00000492595 USP47Q96K76 1375 aa13□□□□□ -0.33
SEC22A-210ENST00000492595 PSEN1P49768 467 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms