RNA–Protein interactions for RNA: ENST00000492595.5

SEC22A-210, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 972 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-210ENST00000492595 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
SEC22A-210ENST00000492595 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
SEC22A-210ENST00000492595 NISCHQ9Y2I1 1504 aa23.1■■□□□ 1.29
SEC22A-210ENST00000492595 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
SEC22A-210ENST00000492595 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
SEC22A-210ENST00000492595 ABCC9O60706 1549 aa21.56■■□□□ 1.04
SEC22A-210ENST00000492595 FOXD1Q16676 465 aa21.11■□□□□ 0.97
SEC22A-210ENST00000492595 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
SEC22A-210ENST00000492595 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
SEC22A-210ENST00000492595 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
SEC22A-210ENST00000492595 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.84
SEC22A-210ENST00000492595 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
SEC22A-210ENST00000492595 ADRA2BP18089 450 aa20.09■□□□□ 0.81
SEC22A-210ENST00000492595 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
SEC22A-210ENST00000492595 NACADO15069 1562 aa20■□□□□ 0.79
SEC22A-210ENST00000492595 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
SEC22A-210ENST00000492595 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
SEC22A-210ENST00000492595 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
SEC22A-210ENST00000492595 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
SEC22A-210ENST00000492595 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
SEC22A-210ENST00000492595 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
SEC22A-210ENST00000492595 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
SEC22A-210ENST00000492595 MSH5O43196 834 aa19.51■□□□□ 0.71
SEC22A-210ENST00000492595 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
SEC22A-210ENST00000492595 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
SEC22A-210ENST00000492595 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
SEC22A-210ENST00000492595 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
SEC22A-210ENST00000492595 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
SEC22A-210ENST00000492595 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
SEC22A-210ENST00000492595 CUX2O14529 1486 aa18.87■□□□□ 0.61
SEC22A-210ENST00000492595 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
SEC22A-210ENST00000492595 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
SEC22A-210ENST00000492595 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
SEC22A-210ENST00000492595 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
SEC22A-210ENST00000492595 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
SEC22A-210ENST00000492595 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
SEC22A-210ENST00000492595 NESP48681 1621 aa18.31■□□□□ 0.52
SEC22A-210ENST00000492595 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
SEC22A-210ENST00000492595 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
SEC22A-210ENST00000492595 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
SEC22A-210ENST00000492595 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
SEC22A-210ENST00000492595 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
SEC22A-210ENST00000492595 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
SEC22A-210ENST00000492595 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
SEC22A-210ENST00000492595 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
SEC22A-210ENST00000492595 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
SEC22A-210ENST00000492595 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
SEC22A-210ENST00000492595 OSCARQ8IYS5 282 aa18■□□□□ 0.47
SEC22A-210ENST00000492595 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
SEC22A-210ENST00000492595 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
SEC22A-210ENST00000492595 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
SEC22A-210ENST00000492595 CNKSR2Q8WXI2 1034 aa17.95■□□□□ 0.46
SEC22A-210ENST00000492595 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
SEC22A-210ENST00000492595 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
SEC22A-210ENST00000492595 WDR62O43379 1518 aa17.88■□□□□ 0.45
SEC22A-210ENST00000492595 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
SEC22A-210ENST00000492595 KCNA4P22459 653 aa17.78■□□□□ 0.44
SEC22A-210ENST00000492595 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
SEC22A-210ENST00000492595 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
SEC22A-210ENST00000492595 HOXD11P31277 338 aaPredicted RBP17.7■□□□□ 0.42
SEC22A-210ENST00000492595 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
SEC22A-210ENST00000492595 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
SEC22A-210ENST00000492595 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
SEC22A-210ENST00000492595 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
SEC22A-210ENST00000492595 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
SEC22A-210ENST00000492595 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
SEC22A-210ENST00000492595 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
SEC22A-210ENST00000492595 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
SEC22A-210ENST00000492595 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
SEC22A-210ENST00000492595 CFTRP13569 1480 aa17.57■□□□□ 0.4
SEC22A-210ENST00000492595 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
SEC22A-210ENST00000492595 WIZO95785 1651 aa17.47■□□□□ 0.39
SEC22A-210ENST00000492595 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
SEC22A-210ENST00000492595 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
SEC22A-210ENST00000492595 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
SEC22A-210ENST00000492595 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
SEC22A-210ENST00000492595 FBLN2P98095 1184 aa17.33■□□□□ 0.36
SEC22A-210ENST00000492595 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
SEC22A-210ENST00000492595 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
SEC22A-210ENST00000492595 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
SEC22A-210ENST00000492595 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
SEC22A-210ENST00000492595 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEC22A-210ENST00000492595 CHD1O14646 1710 aa17.17■□□□□ 0.34
SEC22A-210ENST00000492595 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
SEC22A-210ENST00000492595 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
SEC22A-210ENST00000492595 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
SEC22A-210ENST00000492595 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
SEC22A-210ENST00000492595 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
SEC22A-210ENST00000492595 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
SEC22A-210ENST00000492595 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
SEC22A-210ENST00000492595 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
SEC22A-210ENST00000492595 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
SEC22A-210ENST00000492595 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
SEC22A-210ENST00000492595 SOGA1O94964 1423 aa17.03■□□□□ 0.32
SEC22A-210ENST00000492595 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
SEC22A-210ENST00000492595 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
SEC22A-210ENST00000492595 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
SEC22A-210ENST00000492595 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
SEC22A-210ENST00000492595 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
SEC22A-210ENST00000492595 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms