RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 SMTNL1A8MU46 457 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 IGBP1P78318 339 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 TPD52L2O43399 206 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 U2AF2P26368 475 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEB-209ENST00000427231 AK7Q96M32 723 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 SLC26A8Q96RN1 970 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 UTP14AQ9BVJ6 771 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 LCMT1Q9UIC8 334 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 TOM1O60784 492 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 AKAP17AQ02040 695 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 NEUROD2Q15784 382 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 IMMTQ16891 758 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 ZKSCAN2Q63HK3 967 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 PPP2R5AQ15172 486 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 CALCOCO1Q9P1Z2 691 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 FOXP2O15409 715 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 MAP9Q49MG5 647 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 PLVAPQ9BX97 442 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 RAB34Q9BZG1 259 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 ERLIN2O94905 339 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 KDM2AQ9Y2K7 1162 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 VPS8Q8N3P4 1428 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 PLEKHH1Q9ULM0 1364 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 PPFIA3O75145 1194 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 MAP2K2P36507 400 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 IFT57Q9NWB7 429 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 CCDC39Q9UFE4 941 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 ENOX2Q16206 610 aaKnown RBP2.98□□□□□ -1.93
NEB-209ENST00000427231 FILIP1LQ4L180 1135 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 LRRC45Q96CN5 670 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 GSDMDP57764 484 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 UVSSAQ2YD98 709 aa2.98□□□□□ -1.93
NEB-209ENST00000427231 PIP4K2BP78356 416 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 IFI16Q16666 785 aaKnown RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 CLCN1P35523 988 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 GYS2P54840 703 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 ZNF397Q8NF99 534 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 LUZP1Q86V48 1076 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 SLF2Q8IX21 1173 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 BMP2KQ9NSY1 1161 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 MORC2Q9Y6X9 1032 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 SP100P23497 879 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 SF3A1Q15459 793 aaKnown RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 CLASRPQ8N2M8 674 aaKnown RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 DYNC1I1O14576 645 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 VTI1AQ96AJ9 217 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 HOXB7P09629 217 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 HDAC9Q9UKV0 1011 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 PSME1Q06323 249 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 NAA25Q14CX7 972 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 RABEP2Q9H5N1 569 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 BECN2A8MW95 431 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 TMCO4Q5TGY1 634 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 INTS4Q96HW7 963 aaKnown RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 FERMT1Q9BQL6 677 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 KRBA2Q6ZNG9 492 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 NACAP1Q9BZK3 213 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 OFD1O75665 1012 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 HOMER1Q86YM7 354 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 CCT4P50991 539 aaKnown RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 RANBP1P43487 201 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 NBPF1Q3BBV0 1214 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 SASS6Q6UVJ0 657 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 CCDC91Q7Z6B0 441 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 FAM81BQ96LP2 452 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 NPC1L1Q9UHC9 1359 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 ATF7IPQ6VMQ6 1270 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 MTA3Q9BTC8 594 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 PDZRN3Q9UPQ7 1066 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 ZNF500O60304 480 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 CEP57Q86XR8 500 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 PPM1EQ8WY54 764 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 SUDS3Q9H7L9 328 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 FEZ2Q9UHY8 353 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 ANKRD65E5RJM6 399 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 CBFA2T2O43439 604 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 NAP1L4Q99733 375 aaKnown RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 RNF216Q9NWF9 866 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 CCDC144AA2RUR9 1427 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 TXLNAP40222 546 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 STIM1Q13586 685 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 KIRREL3Q8IZU9 778 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 EDEM3Q9BZQ6 932 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 CETN1Q12798 172 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 MORC1Q86VD1 984 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 ZSCAN16Q9H4T2 348 aaPredicted RBP2.97□□□□□ -1.93
NEB-209ENST00000427231 TMOD4Q9NZQ9 345 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 PAXBP1Q9Y5B6 917 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.97□□□□□ -1.93
NEB-209ENST00000427231 NUTM1Q86Y26 1132 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 GOPCQ9HD26 462 aa2.97□□□□□ -1.93
NEB-209ENST00000427231 TTC31Q49AM3 519 aaPredicted RBP2.96□□□□□ -1.93
NEB-209ENST00000427231 ZSCAN30Q86W11 494 aa2.96□□□□□ -1.93
NEB-209ENST00000427231 KDM4AO75164 1064 aa2.96□□□□□ -1.93
NEB-209ENST00000427231 CETN2P41208 172 aa2.96□□□□□ -1.93
NEB-209ENST00000427231 BRPF1P55201 1214 aaPredicted RBP2.96□□□□□ -1.93
NEB-209ENST00000427231 TRIML1Q8N9V2 468 aa2.96□□□□□ -1.93
NEB-209ENST00000427231 MKL1Q969V6 931 aa2.96□□□□□ -1.94
NEB-209ENST00000427231 CCDC30Q5VVM6 783 aa2.96□□□□□ -1.94
NEB-209ENST00000427231 GABPB2Q8TAK5 448 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms