RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 PELP1Q8IZL8 1130 aaKnown RBP4.23□□□□□ -1.73
NEB-209ENST00000427231 MYT1Q01538 1121 aa4.19□□□□□ -1.74
NEB-209ENST00000427231 DCAF8L2P0C7V8 631 aa4.16□□□□□ -1.74
NEB-209ENST00000427231 TTBK1Q5TCY1 1321 aaPredicted RBP4.03□□□□□ -1.76
NEB-209ENST00000427231 FAM9AQ8IZU1 332 aaPredicted RBP4.03□□□□□ -1.76
NEB-209ENST00000427231 PPARGC1BQ86YN6 1023 aaKnown RBP3.99□□□□□ -1.77
NEB-209ENST00000427231 ERICH6Q7L0X2 663 aa3.98□□□□□ -1.77
NEB-209ENST00000427231 ZEB1P37275 1124 aaPredicted RBP3.95□□□□□ -1.78
NEB-209ENST00000427231 ACIN1Q9UKV3 1341 aaKnown RBP3.94□□□□□ -1.78
NEB-209ENST00000427231 PCGF6Q9BYE7 350 aa3.94□□□□□ -1.78
NEB-209ENST00000427231 YTHDC1Q96MU7 727 aaKnown RBP3.92□□□□□ -1.78
NEB-209ENST00000427231 RANGAP1P46060 587 aaPredicted RBP3.91□□□□□ -1.78
NEB-209ENST00000427231 BCL11AQ9H165 835 aa3.91□□□□□ -1.78
NEB-209ENST00000427231 EIF5BO60841 1220 aaKnown RBP3.89□□□□□ -1.79
NEB-209ENST00000427231 SLC24A1O60721 1099 aa3.89□□□□□ -1.79
NEB-209ENST00000427231 CCER1Q8TC90 406 aaPredicted RBP3.88□□□□□ -1.79
NEB-209ENST00000427231 CENPBP07199 599 aaPredicted RBP3.87□□□□□ -1.79
NEB-209ENST00000427231 PRKCSHP14314 528 aaPredicted RBP3.86□□□□□ -1.79
NEB-209ENST00000427231 GTF3C3Q9Y5Q9 886 aa3.86□□□□□ -1.79
NEB-209ENST00000427231 APLP2Q06481 763 aa3.84□□□□□ -1.79
NEB-209ENST00000427231 SCAF1Q9H7N4 1312 aaKnown RBP3.82□□□□□ -1.8
NEB-209ENST00000427231 EHMT2Q96KQ7 1210 aa3.8□□□□□ -1.8
NEB-209ENST00000427231 HRCP23327 699 aa3.8□□□□□ -1.8
NEB-209ENST00000427231 CCDC136Q96JN2 1154 aa3.8□□□□□ -1.8
NEB-209ENST00000427231 CLSPNQ9HAW4 1339 aa3.76□□□□□ -1.81
NEB-209ENST00000427231 PLEKHG5O94827 1062 aa3.76□□□□□ -1.81
NEB-209ENST00000427231 RTN4Q9NQC3 1192 aaKnown RBP3.76□□□□□ -1.81
NEB-209ENST00000427231 ANO8Q9HCE9 1232 aaPredicted RBP3.75□□□□□ -1.81
NEB-209ENST00000427231 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.74□□□□□ -1.81
NEB-209ENST00000427231 BCANQ96GW7 911 aa3.73□□□□□ -1.81
NEB-209ENST00000427231 MYT1LQ9UL68 1186 aa3.7□□□□□ -1.82
NEB-209ENST00000427231 AMER1Q5JTC6 1135 aaPredicted RBP3.7□□□□□ -1.82
NEB-209ENST00000427231 CSRNP3Q8WYN3 585 aa3.7□□□□□ -1.82
NEB-209ENST00000427231 A0A0U1RQG5 324 aaPredicted RBP3.7□□□□□ -1.82
NEB-209ENST00000427231 PODXL2Q9NZ53 605 aa3.69□□□□□ -1.82
NEB-209ENST00000427231 NEUROD1Q13562 356 aa3.68□□□□□ -1.82
NEB-209ENST00000427231 ANP32EQ9BTT0 268 aa3.67□□□□□ -1.82
NEB-209ENST00000427231 NBR1Q14596 966 aa3.67□□□□□ -1.82
NEB-209ENST00000427231 NISCHQ9Y2I1 1504 aa3.66□□□□□ -1.82
NEB-209ENST00000427231 ARID4BQ4LE39 1312 aaPredicted RBP3.65□□□□□ -1.83
NEB-209ENST00000427231 DAXXQ9UER7 740 aaPredicted RBP3.64□□□□□ -1.83
NEB-209ENST00000427231 SUPT5HO00267 1087 aaKnown RBP3.64□□□□□ -1.83
NEB-209ENST00000427231 DEKP35659 375 aaKnown RBP3.63□□□□□ -1.83
NEB-209ENST00000427231 SALL2Q9Y467 1007 aaPredicted RBP3.61□□□□□ -1.83
NEB-209ENST00000427231 AEBP2Q6ZN18 517 aaPredicted RBP3.61□□□□□ -1.83
NEB-209ENST00000427231 TIMELESSQ9UNS1 1208 aa3.61□□□□□ -1.83
NEB-209ENST00000427231 DIEXFQ68CQ4 756 aaKnown RBP3.6□□□□□ -1.83
NEB-209ENST00000427231 VSIG10Q8N0Z9 540 aa3.6□□□□□ -1.83
NEB-209ENST00000427231 NEFMP07197 916 aa3.59□□□□□ -1.83
NEB-209ENST00000427231 SHROOM4Q9ULL8 1493 aa3.59□□□□□ -1.83
NEB-209ENST00000427231 ITGAEP38570 1179 aa3.59□□□□□ -1.83
NEB-209ENST00000427231 GLIPR1L2Q4G1C9 344 aa3.59□□□□□ -1.83
NEB-209ENST00000427231 NEFLP07196 543 aa3.58□□□□□ -1.84
NEB-209ENST00000427231 RTL5Q5HYW3 569 aaPredicted RBP3.57□□□□□ -1.84
NEB-209ENST00000427231 PKNOX2Q96KN3 472 aa3.56□□□□□ -1.84
NEB-209ENST00000427231 PDE4CQ08493 712 aa3.56□□□□□ -1.84
NEB-209ENST00000427231 TRIM26Q12899 539 aaPredicted RBP3.55□□□□□ -1.84
NEB-209ENST00000427231 HAP1P54257 671 aaPredicted RBP3.55□□□□□ -1.84
NEB-209ENST00000427231 CFAP44Q96MT7 982 aa3.55□□□□□ -1.84
NEB-209ENST00000427231 LOC105371045A0A1W2PR82 267 aa3.54□□□□□ -1.84
NEB-209ENST00000427231 CHMP4AQ9BY43 222 aa3.54□□□□□ -1.84
NEB-209ENST00000427231 POLR3GLQ9BT43 218 aa3.54□□□□□ -1.84
NEB-209ENST00000427231 CNGB1Q14028 1251 aaPredicted RBP3.54□□□□□ -1.84
NEB-209ENST00000427231 STAC3Q96MF2 364 aa3.54□□□□□ -1.84
NEB-209ENST00000427231 ARXQ96QS3 562 aa3.53□□□□□ -1.84
NEB-209ENST00000427231 IL27Q8NEV9 243 aa3.53□□□□□ -1.84
NEB-209ENST00000427231 CDK11AQ9UQ88 783 aaPredicted RBP3.52□□□□□ -1.85
NEB-209ENST00000427231 ERICH6BQ5W0A0 696 aa3.51□□□□□ -1.85
NEB-209ENST00000427231 IRX6P78412 446 aaPredicted RBP3.51□□□□□ -1.85
NEB-209ENST00000427231 FKBP8Q14318 412 aa3.51□□□□□ -1.85
NEB-209ENST00000427231 NPM2Q86SE8 214 aaKnown RBP3.51□□□□□ -1.85
NEB-209ENST00000427231 TRIM41Q8WV44 630 aa3.51□□□□□ -1.85
NEB-209ENST00000427231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.5□□□□□ -1.85
NEB-209ENST00000427231 HMGB2P26583 209 aaKnown RBP3.5□□□□□ -1.85
NEB-209ENST00000427231 NAP1L5Q96NT1 182 aaPredicted RBP3.5□□□□□ -1.85
NEB-209ENST00000427231 PAXIP1Q6ZW49 1069 aaPredicted RBP3.5□□□□□ -1.85
NEB-209ENST00000427231 DHX37Q8IY37 1157 aaKnown RBP3.49□□□□□ -1.85
NEB-209ENST00000427231 ARID3AQ99856 593 aa3.49□□□□□ -1.85
NEB-209ENST00000427231 BCL11BQ9C0K0 894 aaPredicted RBP3.48□□□□□ -1.85
NEB-209ENST00000427231 ZNF316A6NFI3 1004 aaPredicted RBP3.48□□□□□ -1.85
NEB-209ENST00000427231 MAPK8IP2Q13387 824 aaPredicted RBP3.48□□□□□ -1.85
NEB-209ENST00000427231 USP35Q9P2H5 1018 aa3.48□□□□□ -1.85
NEB-209ENST00000427231 PABPN1Q86U42 306 aaKnown RBP eCLIP3.48□□□□□ -1.85
NEB-209ENST00000427231 CHMP4BQ9H444 224 aaKnown RBP3.47□□□□□ -1.85
NEB-209ENST00000427231 RSPH4AQ5TD94 716 aa3.47□□□□□ -1.85
NEB-209ENST00000427231 ZNF526Q8TF50 670 aaPredicted RBP3.47□□□□□ -1.85
NEB-209ENST00000427231 NGEFQ8N5V2 710 aa3.46□□□□□ -1.86
NEB-209ENST00000427231 ZBTB47Q9UFB7 747 aaPredicted RBP3.46□□□□□ -1.86
NEB-209ENST00000427231 ATP1B4Q9UN42 357 aaPredicted RBP3.46□□□□□ -1.86
NEB-209ENST00000427231 MIER1Q8N108 512 aa3.46□□□□□ -1.86
NEB-209ENST00000427231 PLPPR3Q6T4P5 718 aa3.45□□□□□ -1.86
NEB-209ENST00000427231 UBE2Q2Q8WVN8 375 aa3.45□□□□□ -1.86
NEB-209ENST00000427231 RBM19Q9Y4C8 960 aaKnown RBP3.45□□□□□ -1.86
NEB-209ENST00000427231 TSHZ2Q9NRE2 1034 aa3.45□□□□□ -1.86
NEB-209ENST00000427231 ZMYND15Q9H091 742 aa3.45□□□□□ -1.86
NEB-209ENST00000427231 HMGB3O15347 200 aaKnown RBP3.45□□□□□ -1.86
NEB-209ENST00000427231 CDCA8Q53HL2 280 aa3.44□□□□□ -1.86
NEB-209ENST00000427231 PDIA4P13667 645 aaKnown RBP3.44□□□□□ -1.86
NEB-209ENST00000427231 RBM10P98175 930 aaKnown RBP3.44□□□□□ -1.86
NEB-209ENST00000427231 KLHL34Q8N239 644 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms