RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 LRRCC1Q9C099 1032 aa14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 DIAPH3Q9NSV4 1193 aa14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 SMARCA5O60264 1052 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 EIF2S2P20042 333 aaKnown RBP14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
UBE2D3-209ENST00000394804 C8orf58Q8NAV2 365 aa14.17□□□□□ -0.14
UBE2D3-209ENST00000394804 RUFY2Q8WXA3 655 aa14.17□□□□□ -0.14
UBE2D3-209ENST00000394804 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
UBE2D3-209ENST00000394804 PTPRCP08575 1304 aa14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 BAG4O95429 457 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 ZC3H13Q5T200 1668 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 TEFQ10587 303 aa14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 ZRSR1Q15695 479 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 THEMISQ8N1K5 641 aaPredicted RBP14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 PLEKHF1Q96S99 279 aa14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 ANTXR1Q9H6X2 564 aa14.16□□□□□ -0.14
UBE2D3-209ENST00000394804 TPM2P07951 284 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 CLCN1P35523 988 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 NLRP6P59044 892 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 RNF214Q8ND24 703 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 KLHL40Q2TBA0 621 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 ANKRD44Q8N8A2 993 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 EXOC6BQ9Y2D4 811 aa14.15□□□□□ -0.14
UBE2D3-209ENST00000394804 SURF6O75683 361 aaKnown RBP14.14□□□□□ -0.15
UBE2D3-209ENST00000394804 DRC7Q8IY82 874 aa14.14□□□□□ -0.15
UBE2D3-209ENST00000394804 SRCIN1Q9C0H9 1055 aa14.14□□□□□ -0.15
UBE2D3-209ENST00000394804 ZSCAN30Q86W11 494 aa14.14□□□□□ -0.15
UBE2D3-209ENST00000394804 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
UBE2D3-209ENST00000394804 SMC3Q9UQE7 1217 aa14.14□□□□□ -0.15
UBE2D3-209ENST00000394804 DCTPP1Q9H773 170 aa14.13□□□□□ -0.15
UBE2D3-209ENST00000394804 MIS18AQ9NYP9 233 aa14.13□□□□□ -0.15
UBE2D3-209ENST00000394804 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
UBE2D3-209ENST00000394804 C9orf78Q9NZ63 289 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-209ENST00000394804 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
UBE2D3-209ENST00000394804 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
UBE2D3-209ENST00000394804 ZKSCAN1P17029 563 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 NAP1L2Q9ULW6 460 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 GOLGA6L6A8MZA4 724 aa14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 SDSP20132 328 aa14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 CNTROBQ8N137 903 aa14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 PLEKHM2Q8IWE5 1019 aa14.12□□□□□ -0.15
UBE2D3-209ENST00000394804 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 F6X3S4 739 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 IFIT2P09913 472 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 HDGFL1Q5TGJ6 251 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 RRAGDQ9NQL2 400 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 ZRANB1Q9UGI0 708 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 R3HCC1Q9Y3T6 440 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 MEIS3Q99687 375 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 TSPY26PQ9H489 355 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 MROH2AA6NES4 1674 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 MX1P20591 662 aa14.11□□□□□ -0.15
UBE2D3-209ENST00000394804 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 WDR33Q9C0J8 1336 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 NUTM2GQ5VZR2 741 aa14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 ANKLE2Q86XL3 938 aa14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 SPATA31D1Q6ZQQ2 1576 aa14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 C1orf141Q5JVX7 400 aa14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 ARID3AQ99856 593 aa14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 SETD1BQ9UPS6 1966 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-209ENST00000394804 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 LTKP29376 864 aa14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 IL13P35225 146 aa14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 RIMS2Q9UQ26 1411 aa14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 AEBP1Q8IUX7 1158 aa14.09□□□□□ -0.15
UBE2D3-209ENST00000394804 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.15
UBE2D3-209ENST00000394804 CLASRPQ8N2M8 674 aaKnown RBP14.08□□□□□ -0.15
UBE2D3-209ENST00000394804 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.15
UBE2D3-209ENST00000394804 ADGRB3O60242 1522 aa14.08□□□□□ -0.16
UBE2D3-209ENST00000394804 VPS37CA5D8V6 355 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-209ENST00000394804 CEP85Q6P2H3 762 aa14.08□□□□□ -0.16
UBE2D3-209ENST00000394804 IL1RAPL2Q9NP60 686 aa14.08□□□□□ -0.16
UBE2D3-209ENST00000394804 NLRP1Q9C000 1473 aa14.08□□□□□ -0.16
UBE2D3-209ENST00000394804 EDC4Q6P2E9 1401 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 SYCE3A1L190 88 aa14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 RRP9O43818 475 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 ABCC4O15439 1325 aa14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-209ENST00000394804 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 BRPF1P55201 1214 aaPredicted RBP14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 PIK3C2BO00750 1634 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 KRT24Q2M2I5 525 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 ABTB2Q8N961 1025 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 PDE1AP54750 535 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 FLIIQ13045 1269 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms