RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 TTLL5Q6EMB2 1281 aa17.72■□□□□ 0.43
CDH23-202ENST00000299366 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
CDH23-202ENST00000299366 CCDC173Q0VFZ6 552 aa17.72■□□□□ 0.43
CDH23-202ENST00000299366 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
CDH23-202ENST00000299366 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDH23-202ENST00000299366 ADGRL1O94910 1474 aa17.71■□□□□ 0.43
CDH23-202ENST00000299366 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.43
CDH23-202ENST00000299366 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
CDH23-202ENST00000299366 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.42
CDH23-202ENST00000299366 GUCY1B3Q02153 619 aa17.71■□□□□ 0.42
CDH23-202ENST00000299366 TFIP11Q9UBB9 837 aaKnown RBP17.71■□□□□ 0.42
CDH23-202ENST00000299366 TRAPPC8Q9Y2L5 1435 aa17.7■□□□□ 0.42
CDH23-202ENST00000299366 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
CDH23-202ENST00000299366 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
CDH23-202ENST00000299366 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
CDH23-202ENST00000299366 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
CDH23-202ENST00000299366 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
CDH23-202ENST00000299366 SDSP20132 328 aa17.7■□□□□ 0.42
CDH23-202ENST00000299366 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
CDH23-202ENST00000299366 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
CDH23-202ENST00000299366 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
CDH23-202ENST00000299366 CCDC39Q9UFE4 941 aa17.69■□□□□ 0.42
CDH23-202ENST00000299366 KIF14Q15058 1648 aa17.69■□□□□ 0.42
CDH23-202ENST00000299366 BAG4O95429 457 aaKnown RBP17.69■□□□□ 0.42
CDH23-202ENST00000299366 GCC2Q8IWJ2 1684 aa17.69■□□□□ 0.42
CDH23-202ENST00000299366 FLIIQ13045 1269 aa17.69■□□□□ 0.42
CDH23-202ENST00000299366 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
CDH23-202ENST00000299366 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
CDH23-202ENST00000299366 USP19O94966 1318 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 CD109Q6YHK3 1445 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 TRIM29Q14134 588 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 ALDH1L2Q3SY69 923 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 BMP2KLQ5H9B9 411 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
CDH23-202ENST00000299366 ZGPATQ8N5A5 531 aaKnown RBP17.68■□□□□ 0.42
CDH23-202ENST00000299366 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
CDH23-202ENST00000299366 CKAP2LQ8IYA6 745 aa17.67■□□□□ 0.42
CDH23-202ENST00000299366 PDILTQ8N807 584 aa17.67■□□□□ 0.42
CDH23-202ENST00000299366 ZNF830Q96NB3 372 aaPredicted RBP17.67■□□□□ 0.42
CDH23-202ENST00000299366 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
CDH23-202ENST00000299366 ATF3P18847 181 aa17.67■□□□□ 0.42
CDH23-202ENST00000299366 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
CDH23-202ENST00000299366 ME1P48163 572 aa17.67■□□□□ 0.42
CDH23-202ENST00000299366 CWC22Q9HCG8 908 aaKnown RBP17.67■□□□□ 0.42
CDH23-202ENST00000299366 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
CDH23-202ENST00000299366 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
CDH23-202ENST00000299366 UHRF1BP1Q6BDS2 1440 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 RAB11FIP4Q86YS3 637 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 KDM5CP41229 1560 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 UQCRHP07919 91 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 NUCB1Q02818 461 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
CDH23-202ENST00000299366 SMC2O95347 1197 aa17.65■□□□□ 0.42
CDH23-202ENST00000299366 MCM2P49736 904 aa17.65■□□□□ 0.42
CDH23-202ENST00000299366 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
CDH23-202ENST00000299366 PRDM10Q9NQV6 1147 aa17.65■□□□□ 0.42
CDH23-202ENST00000299366 KINO60870 393 aaKnown RBP17.65■□□□□ 0.42
CDH23-202ENST00000299366 ZMYM4Q5VZL5 1548 aa17.65■□□□□ 0.42
CDH23-202ENST00000299366 PSMA5P28066 241 aa17.65■□□□□ 0.42
CDH23-202ENST00000299366 TNMDQ9H2S6 317 aa17.65■□□□□ 0.42
CDH23-202ENST00000299366 CFAP65Q6ZU64 1925 aaKnown RBP17.65■□□□□ 0.42
CDH23-202ENST00000299366 MARCH6O60337 910 aa17.64■□□□□ 0.42
CDH23-202ENST00000299366 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.42
CDH23-202ENST00000299366 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.42
CDH23-202ENST00000299366 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
CDH23-202ENST00000299366 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
CDH23-202ENST00000299366 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
CDH23-202ENST00000299366 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.41
CDH23-202ENST00000299366 DNMT1P26358 1616 aaKnown RBP17.63■□□□□ 0.41
CDH23-202ENST00000299366 PPP1R42Q7Z4L9 355 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 ZSCAN30Q86W11 494 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 CHAMP1Q96JM3 812 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 WDR62O43379 1518 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 FAM135AQ9P2D6 1515 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 VAMP4O75379 141 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 TPM2P07951 284 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 FANCAO15360 1455 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 RAB11FIP3O75154 756 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 KRT85P78386 507 aa17.63■□□□□ 0.41
CDH23-202ENST00000299366 ACEP12821 1306 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 CCDC34Q96HJ3 373 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 LRRC2Q9BYS8 371 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 STK38Q15208 465 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 ANTXR1Q9H6X2 564 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
CDH23-202ENST00000299366 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
CDH23-202ENST00000299366 TPM3P06753 285 aa17.61■□□□□ 0.41
CDH23-202ENST00000299366 CPA1P15085 419 aa17.61■□□□□ 0.41
CDH23-202ENST00000299366 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
CDH23-202ENST00000299366 GAS2L3Q86XJ1 694 aa17.61■□□□□ 0.41
CDH23-202ENST00000299366 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms