RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 JMYQ8N9B5 988 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 GOPCQ9HD26 462 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 CFAP70Q5T0N1 1121 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 FERMT3Q86UX7 667 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 CEP57L1Q8IYX8 460 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 ANKRD1Q15327 319 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 SULT6B1Q6IMI4 303 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 SPDYE4A6NLX3 237 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 BCCIPQ9P287 314 aaKnown RBP eCLIP18.94■□□□□ 0.62
SSRP1-202ENST00000293880 MCM4P33991 863 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 MVPQ14764 893 aaKnown RBP18.93■□□□□ 0.62
SSRP1-202ENST00000293880 BBXQ8WY36 941 aaPredicted RBP18.93■□□□□ 0.62
SSRP1-202ENST00000293880 ESPNB1AK53 854 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 EPB41L2O43491 1005 aaKnown RBP18.93■□□□□ 0.62
SSRP1-202ENST00000293880 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
SSRP1-202ENST00000293880 DHX8Q14562 1220 aaKnown RBP18.93■□□□□ 0.62
SSRP1-202ENST00000293880 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 GAS2L2Q8NHY3 880 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 GUCY1B3Q02153 619 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 SOGA3Q5TF21 947 aa18.93■□□□□ 0.62
SSRP1-202ENST00000293880 AAMPQ13685 434 aa18.92■□□□□ 0.62
SSRP1-202ENST00000293880 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
SSRP1-202ENST00000293880 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
SSRP1-202ENST00000293880 TDO2P48775 406 aa18.91■□□□□ 0.62
SSRP1-202ENST00000293880 PLCD3Q8N3E9 789 aa18.91■□□□□ 0.62
SSRP1-202ENST00000293880 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
SSRP1-202ENST00000293880 CABP4P57796 275 aa18.91■□□□□ 0.62
SSRP1-202ENST00000293880 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
SSRP1-202ENST00000293880 KLHL10Q6JEL2 608 aa18.91■□□□□ 0.62
SSRP1-202ENST00000293880 BLOC1S2Q6QNY1 142 aa18.91■□□□□ 0.62
SSRP1-202ENST00000293880 PLEKHO1Q53GL0 409 aaPredicted RBP18.91■□□□□ 0.62
SSRP1-202ENST00000293880 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
SSRP1-202ENST00000293880 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
SSRP1-202ENST00000293880 GTF2F1P35269 517 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSRP1-202ENST00000293880 BICDL1Q6ZP65 573 aa18.9■□□□□ 0.62
SSRP1-202ENST00000293880 CCDC148Q8NFR7 591 aa18.9■□□□□ 0.62
SSRP1-202ENST00000293880 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
SSRP1-202ENST00000293880 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
SSRP1-202ENST00000293880 CCDC178Q5BJE1 867 aa18.9■□□□□ 0.62
SSRP1-202ENST00000293880 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
SSRP1-202ENST00000293880 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
SSRP1-202ENST00000293880 SRGAP3O43295 1099 aa18.89■□□□□ 0.62
SSRP1-202ENST00000293880 ARHGAP5Q13017 1502 aa18.89■□□□□ 0.62
SSRP1-202ENST00000293880 RNF187Q5TA31 235 aaPredicted RBP18.89■□□□□ 0.61
SSRP1-202ENST00000293880 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
SSRP1-202ENST00000293880 ZBTB9Q96C00 473 aa18.89■□□□□ 0.61
SSRP1-202ENST00000293880 TMCO3Q6UWJ1 677 aa18.89■□□□□ 0.61
SSRP1-202ENST00000293880 GNL3LQ9NVN8 582 aaKnown RBP18.89■□□□□ 0.61
SSRP1-202ENST00000293880 MPHOSPH10O00566 681 aaKnown RBP18.89■□□□□ 0.61
SSRP1-202ENST00000293880 CFAP45Q9UL16 551 aa18.89■□□□□ 0.61
SSRP1-202ENST00000293880 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
SSRP1-202ENST00000293880 MAP3K11Q16584 847 aa18.89■□□□□ 0.61
SSRP1-202ENST00000293880 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
SSRP1-202ENST00000293880 IQCEQ6IPM2 695 aa18.88■□□□□ 0.61
SSRP1-202ENST00000293880 TAF4BQ92750 862 aa18.88■□□□□ 0.61
SSRP1-202ENST00000293880 PROSER2Q86WR7 435 aaPredicted RBP18.88■□□□□ 0.61
SSRP1-202ENST00000293880 LUC7LQ9NQ29 371 aaKnown RBP18.88■□□□□ 0.61
SSRP1-202ENST00000293880 ZNF76P36508 570 aa18.88■□□□□ 0.61
SSRP1-202ENST00000293880 ARHGAP29Q52LW3 1261 aa18.88■□□□□ 0.61
SSRP1-202ENST00000293880 CPLX3Q8WVH0 158 aa18.88■□□□□ 0.61
SSRP1-202ENST00000293880 NACAP1Q9BZK3 213 aa18.88■□□□□ 0.61
SSRP1-202ENST00000293880 NUTM2BA6NNL0 878 aaPredicted RBP18.87■□□□□ 0.61
SSRP1-202ENST00000293880 NUTM2EB1AL46 878 aaPredicted RBP18.87■□□□□ 0.61
SSRP1-202ENST00000293880 PIP4K2BP78356 416 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 NUTM2AQ8IVF1 878 aaPredicted RBP18.87■□□□□ 0.61
SSRP1-202ENST00000293880 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 NEBLO76041 1014 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 SRCIN1Q9C0H9 1055 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 CCDC57Q2TAC2 916 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
SSRP1-202ENST00000293880 UBXN4Q92575 508 aa18.87■□□□□ 0.61
SSRP1-202ENST00000293880 PDE3AQ14432 1141 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 TMEM57Q8N5G2 664 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 CUX1P39880 1505 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 SMTNL1A8MU46 457 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 JAKMIP3Q5VZ66 844 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 UBAC1Q9BSL1 405 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 ZSCAN29Q8IWY8 852 aaPredicted RBP18.86■□□□□ 0.61
SSRP1-202ENST00000293880 MYOM3Q5VTT5 1437 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 URI1O94763 535 aaPredicted RBP18.86■□□□□ 0.61
SSRP1-202ENST00000293880 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
SSRP1-202ENST00000293880 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
SSRP1-202ENST00000293880 SSFA2P28290 1259 aa18.85■□□□□ 0.61
SSRP1-202ENST00000293880 PTPN14Q15678 1187 aa18.85■□□□□ 0.61
SSRP1-202ENST00000293880 CKAP2LQ8IYA6 745 aa18.85■□□□□ 0.61
SSRP1-202ENST00000293880 CCDC97Q96F63 343 aaPredicted RBP18.85■□□□□ 0.61
SSRP1-202ENST00000293880 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
SSRP1-202ENST00000293880 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
SSRP1-202ENST00000293880 PPFIA3O75145 1194 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 RBM27Q9P2N5 1060 aaKnown RBP18.84■□□□□ 0.61
SSRP1-202ENST00000293880 IDH1O75874 414 aaKnown RBP18.84■□□□□ 0.61
SSRP1-202ENST00000293880 UBE4AQ14139 1066 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 UBE2Q2Q8WVN8 375 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms