RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SSFA2P28290 1259 aa17.95■□□□□ 0.46
SFSWAP-201ENST00000261674 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-201ENST00000261674 FSD2A1L4K1 749 aa17.94■□□□□ 0.46
SFSWAP-201ENST00000261674 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-201ENST00000261674 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
SFSWAP-201ENST00000261674 SMARCA5O60264 1052 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 CHMP4BQ9H444 224 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 C19orf44Q9H6X5 657 aa17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 K7ELQ4 463 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 GAS2L3Q86XJ1 694 aa17.93■□□□□ 0.46
SFSWAP-201ENST00000261674 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 ZC3H6P61129 1189 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 OTUD7AQ8TE49 926 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 KIF2CQ99661 725 aa17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-201ENST00000261674 ATP7BP35670 1465 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 SLC4A10Q6U841 1118 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 SNX21Q969T3 373 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 TECPR2O15040 1411 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 CDC45O75419 566 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 CPS1P31327 1500 aa17.91■□□□□ 0.46
SFSWAP-201ENST00000261674 GOLGA6L22H0YM25 854 aa17.9■□□□□ 0.46
SFSWAP-201ENST00000261674 MCM10Q7L590 875 aa17.9■□□□□ 0.46
SFSWAP-201ENST00000261674 API5Q9BZZ5 524 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-201ENST00000261674 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
SFSWAP-201ENST00000261674 AMPHP49418 695 aa17.9■□□□□ 0.46
SFSWAP-201ENST00000261674 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
SFSWAP-201ENST00000261674 PLEKHG3A1L390 1219 aa17.89■□□□□ 0.46
SFSWAP-201ENST00000261674 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
SFSWAP-201ENST00000261674 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-201ENST00000261674 IL13P35225 146 aa17.89■□□□□ 0.45
SFSWAP-201ENST00000261674 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
SFSWAP-201ENST00000261674 CFAP44Q96MT7 982 aa17.89■□□□□ 0.45
SFSWAP-201ENST00000261674 RAB3GAP1Q15042 981 aa17.88■□□□□ 0.45
SFSWAP-201ENST00000261674 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
SFSWAP-201ENST00000261674 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
SFSWAP-201ENST00000261674 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
SFSWAP-201ENST00000261674 PLEKHM2Q8IWE5 1019 aa17.87■□□□□ 0.45
SFSWAP-201ENST00000261674 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-201ENST00000261674 ADGRB2O60241 1585 aa17.87■□□□□ 0.45
SFSWAP-201ENST00000261674 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
SFSWAP-201ENST00000261674 PNPLA6Q8IY17 1366 aa17.86■□□□□ 0.45
SFSWAP-201ENST00000261674 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-201ENST00000261674 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 CIZ1Q9ULV3 898 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 ESPNB1AK53 854 aa17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 NECTIN2Q92692 538 aa17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 TPRNQ4KMQ1 711 aa17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 PTCH1Q13635 1447 aa17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 DIP2AQ14689 1571 aa17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 RGPD8O14715 1765 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-201ENST00000261674 CHRNA2Q15822 529 aa17.84■□□□□ 0.45
SFSWAP-201ENST00000261674 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-201ENST00000261674 LRRC7Q96NW7 1537 aa17.84■□□□□ 0.45
SFSWAP-201ENST00000261674 TSHZ3Q63HK5 1081 aa17.83■□□□□ 0.45
SFSWAP-201ENST00000261674 ANP32BQ92688 251 aaKnown RBP17.83■□□□□ 0.45
SFSWAP-201ENST00000261674 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.45
SFSWAP-201ENST00000261674 MEIS3Q99687 375 aa17.83■□□□□ 0.45
SFSWAP-201ENST00000261674 F6X3S4 739 aa17.83■□□□□ 0.44
SFSWAP-201ENST00000261674 DDIT3P35638 169 aa17.83■□□□□ 0.44
SFSWAP-201ENST00000261674 PKP1Q13835 747 aa17.83■□□□□ 0.44
SFSWAP-201ENST00000261674 CPSF1Q10570 1443 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-201ENST00000261674 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
SFSWAP-201ENST00000261674 SKOR2Q2VWA4 1001 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-201ENST00000261674 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 PIK3R4Q99570 1358 aa17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 ABCC4O15439 1325 aa17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 FOXD4L6Q3SYB3 417 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 CAVIN1Q6NZI2 390 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 FOXD4L3Q6VB84 417 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 USP6P35125 1406 aa17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 MAP3K19Q56UN5 1328 aa17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-201ENST00000261674 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 CLCN1P35523 988 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 DCTPP1Q9H773 170 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 SDSP20132 328 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 EDC4Q6P2E9 1401 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 MSH6P52701 1360 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
SFSWAP-201ENST00000261674 CASC1Q6TDU7 716 aa17.8■□□□□ 0.44
SFSWAP-201ENST00000261674 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
SFSWAP-201ENST00000261674 NASPP49321 788 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-201ENST00000261674 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-201ENST00000261674 INTS3Q68E01 1043 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-201ENST00000261674 ZGPATQ8N5A5 531 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-201ENST00000261674 RABEP1Q15276 862 aa17.79■□□□□ 0.44
SFSWAP-201ENST00000261674 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-201ENST00000261674 ZNF142P52746 1687 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-201ENST00000261674 PRPF40AO75400 957 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms