RNA–Protein interactions for RNA: ENSMUST00000120363.1

Hoxa1-202, Transcript of Homeobox protein Hox-A1, mousemouse

TSL 1 (best) BASIC

Gene Hoxa1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-202ENSMUST00000120363 Gm21190A0A0G2JGJ6 266 aa22.46■■□□□ 1.19
Hoxa1-202ENSMUST00000120363 Gm10093D3YYI8 482 aa22.45■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Hdac1O09106 482 aaKnown RBP22.45■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Phf23Q8BSN5 401 aa22.45■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Eya1P97767 591 aa22.44■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 ScaperF8VQ70 1398 aaKnown RBP22.44■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 4933416C03RikQ3V063 378 aa22.43■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 HypkQ9CR41 129 aa22.43■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Anapc15-psA0A140T8L6 141 aa22.42■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Hoxa7P02830 229 aa22.42■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Sox12Q04890 314 aa22.42■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Kif2cQ922S8 721 aa22.42■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Gsdma3Q5Y4Y6 464 aa22.41■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Hoxc9P09633 260 aa22.4■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Fgd1P52734 960 aa22.4■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 Ecm2Q5FW85 670 aa22.4■■□□□ 1.18
Hoxa1-202ENSMUST00000120363 CenppQ9CZ92 286 aa22.39■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 C3P01027 1663 aa22.39■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Terf2O35144 541 aa22.38■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Sv2bQ8BG39 683 aa22.38■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Unc13bQ9Z1N9 1602 aa22.38■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Msh6P54276 1358 aaKnown RBP22.38■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Fam13aQ8BGI4 693 aa22.38■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Arfgef2A2A5R2 1792 aa22.37■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Tbc1d9Q3UYK3 1264 aa22.37■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Foxp4Q9DBY0 795 aaKnown RBP22.37■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Tmem94Q7TSH8 1360 aa22.37■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 1700019A02RikA0A087WPV9 146 aa22.36■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Triml2E9PW10 424 aa22.36■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Ggnbp2Q5SV77 696 aa22.36■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Plppr3Q7TPB0 716 aa22.36■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Gimap6Q8K349 305 aa22.36■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Kdm6aO70546 1401 aa22.35■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Prkar2bP31324 416 aa22.35■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Ncoa4Q5U4H9 625 aa22.35■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Ccne1Q61457 408 aa22.35■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Senp3Q9EP97 568 aaKnown RBP22.35■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Col14a1Q80X19 1797 aa22.35■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Robo1O89026 1612 aa22.34■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Aifm3Q3TY86 605 aa22.34■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Tmem2Q5FWI3 1383 aa22.34■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Myo5bP21271 1818 aa22.34■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 ArxO35085 564 aa22.33■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Nek4Q9Z1J2 792 aa22.33■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Ahnak2E9PYB0 1738 aaKnown RBP22.33■■□□□ 1.17
Hoxa1-202ENSMUST00000120363 Nckap5lQ6GQX2 1323 aa22.33■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Tns3Q5SSZ5 1440 aa22.33■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Prim1P20664 417 aa22.32■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Kdm4cQ8VCD7 1054 aa22.32■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Q3TQI7 289 aaKnown RBP22.31■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 1700010I14RikQ7TPG0 532 aa22.31■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Antxr1Q9CZ52 562 aa22.31■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Atf5O70191 283 aa22.31■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Thsd7aQ69ZU6 1645 aa22.3■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Catsper2A2ARP9 588 aa22.3■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Amotl1Q9D4H4 968 aa22.3■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Topaz1E5FYH1 1653 aa22.3■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Kcnh5Q920E3 988 aa22.3■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 4933402E13RikQ9D4D2 429 aa22.3■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Nfat5Q9WV30 1534 aa22.29■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Ccdc146E9Q9F7 977 aa22.29■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 FanclQ9CR14 375 aa22.29■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Alpk3Q924C5 1678 aa22.29■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Abcc12Q80WJ6 1366 aa22.29■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Pibf1E9Q6K3 756 aa22.28■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Gnai2P08752 355 aaKnown RBP22.28■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Stk36Q69ZM6 1316 aa22.28■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Nup153E9Q3G8 1462 aaKnown RBP22.28■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Aplp1Q03157 653 aa22.28■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Rsph3aQ3UFY4 516 aa22.28■■□□□ 1.16
Hoxa1-202ENSMUST00000120363 Irx3P81067 507 aa22.26■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 TimelessQ9R1X4 1197 aa22.25■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Cyp46a1Q9WVK8 500 aa22.25■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Sipa1l2Q80TE4 1722 aa22.25■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Elp1Q7TT37 1333 aaKnown RBP22.25■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Nid2O88322 1403 aa22.25■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Fyb1O35601 819 aa22.23■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Nucb1Q02819 459 aaKnown RBP22.23■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 TatQ8QZR1 454 aa22.23■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Ppip5k2Q6ZQB6 1129 aa22.23■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Ppp6r3Q922D4 844 aa22.23■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Atg4a-psA0A0G2JFS9 396 aa22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Cnksr1A2A9K7 700 aa22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Fam83gQ5SWY7 812 aa22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Slc35g1Q8BY79 368 aa22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Atg4aQ8C9S8 396 aa22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Rnf123Q5XPI3 1314 aa22.22■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Snap23O09044 210 aa22.21■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Nphp1Q9QY53 687 aa22.21■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Pnpla7A2AJ88 1352 aa22.21■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Pdia3P27773 505 aaKnown RBP22.21■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Tfip11Q9ERA6 838 aaKnown RBP22.21■■□□□ 1.15
Hoxa1-202ENSMUST00000120363 Fmnl2A2APV2 1086 aa22.2■■□□□ 1.14
Hoxa1-202ENSMUST00000120363 MyclP10166 368 aa22.2■■□□□ 1.14
Hoxa1-202ENSMUST00000120363 Wdr17E9Q271 1322 aa22.2■■□□□ 1.14
Hoxa1-202ENSMUST00000120363 Siglec1Q62230 1695 aa22.2■■□□□ 1.14
Hoxa1-202ENSMUST00000120363 Tmem132eQ6IEE6 982 aa22.19■■□□□ 1.14
Hoxa1-202ENSMUST00000120363 Zkscan2G3X952 960 aa22.19■■□□□ 1.14
Hoxa1-202ENSMUST00000120363 GorabQ8BRM2 368 aa22.19■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms