RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Nkx1-2P42580 305 aa20.16■□□□□ 0.82
Trim39-203ENSMUST00000113706 Ddx17Q501J6 650 aaKnown RBP20.15■□□□□ 0.82
Trim39-203ENSMUST00000113706 TnrQ8BYI9 1358 aa20.15■□□□□ 0.82
Trim39-203ENSMUST00000113706 1700019A02RikA0A087WPV9 146 aa20.15■□□□□ 0.82
Trim39-203ENSMUST00000113706 Amotl2Q8K371 772 aa20.15■□□□□ 0.82
Trim39-203ENSMUST00000113706 Armcx1Q9CX83 456 aa20.15■□□□□ 0.82
Trim39-203ENSMUST00000113706 Gli3Q61602 1583 aa20.15■□□□□ 0.82
Trim39-203ENSMUST00000113706 Pibf1E9Q6K3 756 aa20.14■□□□□ 0.81
Trim39-203ENSMUST00000113706 MarsQ68FL6 902 aaKnown RBP20.14■□□□□ 0.81
Trim39-203ENSMUST00000113706 Gsdma3Q5Y4Y6 464 aa20.13■□□□□ 0.81
Trim39-203ENSMUST00000113706 Dixdc1Q80Y83 711 aa20.12■□□□□ 0.81
Trim39-203ENSMUST00000113706 MvpQ9EQK5 861 aa20.1■□□□□ 0.81
Trim39-203ENSMUST00000113706 Nid2O88322 1403 aa20.1■□□□□ 0.81
Trim39-203ENSMUST00000113706 Myo5bP21271 1818 aa20.1■□□□□ 0.81
Trim39-203ENSMUST00000113706 Chl1P70232 1209 aa20.1■□□□□ 0.81
Trim39-203ENSMUST00000113706 Nup153E9Q3G8 1462 aaKnown RBP20.09■□□□□ 0.81
Trim39-203ENSMUST00000113706 Cluap1Q8R3P7 413 aa20.09■□□□□ 0.81
Trim39-203ENSMUST00000113706 Kif24Q6NWW5 1356 aa20.09■□□□□ 0.81
Trim39-203ENSMUST00000113706 Ankrd44B2RXR6 993 aa20.08■□□□□ 0.8
Trim39-203ENSMUST00000113706 Amotl1Q9D4H4 968 aa20.08■□□□□ 0.8
Trim39-203ENSMUST00000113706 AU019823E9PUQ3 292 aa20.07■□□□□ 0.8
Trim39-203ENSMUST00000113706 4930567H17RikQ3V0K5 233 aa20.07■□□□□ 0.8
Trim39-203ENSMUST00000113706 Ric3Q8BPM6 367 aa20.07■□□□□ 0.8
Trim39-203ENSMUST00000113706 Igsf1Q7TQA1 1317 aa20.07■□□□□ 0.8
Trim39-203ENSMUST00000113706 Msh6P54276 1358 aaKnown RBP20.06■□□□□ 0.8
Trim39-203ENSMUST00000113706 Trim30dE9PWL0 497 aa20.06■□□□□ 0.8
Trim39-203ENSMUST00000113706 Ppp1r37Q8BKR5 712 aa20.06■□□□□ 0.8
Trim39-203ENSMUST00000113706 Aifm3Q3TY86 605 aa20.06■□□□□ 0.8
Trim39-203ENSMUST00000113706 Ccdc183A2AJB1 534 aa20.05■□□□□ 0.8
Trim39-203ENSMUST00000113706 Ak7Q9D2H2 614 aa20.05■□□□□ 0.8
Trim39-203ENSMUST00000113706 Foxp4Q9DBY0 795 aaKnown RBP20.05■□□□□ 0.8
Trim39-203ENSMUST00000113706 Nol11Q8BJW5 723 aaKnown RBP20.04■□□□□ 0.8
Trim39-203ENSMUST00000113706 Atl3Q91YH5 541 aa20.04■□□□□ 0.8
Trim39-203ENSMUST00000113706 Abca15E9PWH4 1668 aa20.03■□□□□ 0.8
Trim39-203ENSMUST00000113706 CanxP35564 591 aaKnown RBP20.03■□□□□ 0.8
Trim39-203ENSMUST00000113706 Aplp1Q03157 653 aa20.03■□□□□ 0.8
Trim39-203ENSMUST00000113706 Hs1bp3Q3TC93 395 aa20.03■□□□□ 0.8
Trim39-203ENSMUST00000113706 Ccdc27Q3V036 639 aa20.03■□□□□ 0.8
Trim39-203ENSMUST00000113706 Gm21698A0A087WQP8 267 aa20.02■□□□□ 0.8
Trim39-203ENSMUST00000113706 Gm21671G3UY31 267 aa20.02■□□□□ 0.8
Trim39-203ENSMUST00000113706 Col15a1O35206 1367 aa20.02■□□□□ 0.8
Trim39-203ENSMUST00000113706 Ppp2r3aB2RXC8 1150 aa20.02■□□□□ 0.8
Trim39-203ENSMUST00000113706 DccP70211 1447 aa20.02■□□□□ 0.8
Trim39-203ENSMUST00000113706 Pnmal2G3X9N3 661 aa20.02■□□□□ 0.79
Trim39-203ENSMUST00000113706 Ipo8Q7TMY7 1010 aa20.02■□□□□ 0.79
Trim39-203ENSMUST00000113706 Simc1E9Q6E9 1354 aa20.01■□□□□ 0.79
Trim39-203ENSMUST00000113706 Brinp3Q499E0 766 aa20.01■□□□□ 0.79
Trim39-203ENSMUST00000113706 Q3TQI7 289 aaKnown RBP20■□□□□ 0.79
Trim39-203ENSMUST00000113706 Tmc1Q8R4P5 757 aa20■□□□□ 0.79
Trim39-203ENSMUST00000113706 Chmp4bQ9D8B3 224 aaKnown RBP20■□□□□ 0.79
Trim39-203ENSMUST00000113706 Dlg5E9Q9R9 1921 aa20■□□□□ 0.79
Trim39-203ENSMUST00000113706 Bcl9lQ67FY2 1494 aa19.99■□□□□ 0.79
Trim39-203ENSMUST00000113706 Abcc12Q80WJ6 1366 aa19.99■□□□□ 0.79
Trim39-203ENSMUST00000113706 Gm10471E9Q1C7 252 aa19.99■□□□□ 0.79
Trim39-203ENSMUST00000113706 Cyp2d12Q8BVD2 504 aa19.99■□□□□ 0.79
Trim39-203ENSMUST00000113706 OptnQ8K3K8 584 aa19.99■□□□□ 0.79
Trim39-203ENSMUST00000113706 Aox2Q5SGK3 1345 aa19.99■□□□□ 0.79
Trim39-203ENSMUST00000113706 Dnai1Q8C0M8 701 aa19.98■□□□□ 0.79
Trim39-203ENSMUST00000113706 Card10P58660 1021 aa19.98■□□□□ 0.79
Trim39-203ENSMUST00000113706 Sv2bQ8BG39 683 aa19.98■□□□□ 0.79
Trim39-203ENSMUST00000113706 Atf5O70191 283 aa19.97■□□□□ 0.79
Trim39-203ENSMUST00000113706 FocadA2AKG8 1798 aa19.97■□□□□ 0.79
Trim39-203ENSMUST00000113706 Chpf2Q3UU43 768 aa19.97■□□□□ 0.79
Trim39-203ENSMUST00000113706 TkfcQ8VC30 578 aa19.97■□□□□ 0.79
Trim39-203ENSMUST00000113706 CrklP47941 303 aa19.97■□□□□ 0.79
Trim39-203ENSMUST00000113706 Nkx2-3P97334 362 aa19.96■□□□□ 0.79
Trim39-203ENSMUST00000113706 Fam83gQ5SWY7 812 aa19.96■□□□□ 0.79
Trim39-203ENSMUST00000113706 Sart3Q9JLI8 962 aaKnown RBP19.96■□□□□ 0.79
Trim39-203ENSMUST00000113706 Ppm1gQ61074 542 aa19.95■□□□□ 0.78
Trim39-203ENSMUST00000113706 Eif2s2Q99L45 331 aaKnown RBP19.95■□□□□ 0.78
Trim39-203ENSMUST00000113706 Aldh1l2Q8K009 923 aa19.95■□□□□ 0.78
Trim39-203ENSMUST00000113706 Phf23Q8BSN5 401 aa19.94■□□□□ 0.78
Trim39-203ENSMUST00000113706 SkilQ60665 675 aa19.94■□□□□ 0.78
Trim39-203ENSMUST00000113706 Tnnt1O88346 262 aa19.93■□□□□ 0.78
Trim39-203ENSMUST00000113706 Phlpp2Q8BXA7 1320 aa19.93■□□□□ 0.78
Trim39-203ENSMUST00000113706 Hsp90ab1P11499 724 aaKnown RBP19.92■□□□□ 0.78
Trim39-203ENSMUST00000113706 Tnks1bp1P58871 1720 aa19.92■□□□□ 0.78
Trim39-203ENSMUST00000113706 Zfp142G5E869 1843 aa19.91■□□□□ 0.78
Trim39-203ENSMUST00000113706 Pnpla7A2AJ88 1352 aa19.91■□□□□ 0.78
Trim39-203ENSMUST00000113706 Atp10bB1AWN4 1474 aa19.91■□□□□ 0.78
Trim39-203ENSMUST00000113706 Eif4a1P60843 406 aaKnown RBP19.91■□□□□ 0.78
Trim39-203ENSMUST00000113706 Irx6Q9ER75 438 aa19.91■□□□□ 0.78
Trim39-203ENSMUST00000113706 Arhgef1Q61210 920 aaKnown RBP19.9■□□□□ 0.78
Trim39-203ENSMUST00000113706 ThemisQ8BGW0 636 aa19.9■□□□□ 0.78
Trim39-203ENSMUST00000113706 Slit1Q80TR4 1531 aa19.9■□□□□ 0.78
Trim39-203ENSMUST00000113706 Wwc1Q5SXA9 1104 aa19.89■□□□□ 0.78
Trim39-203ENSMUST00000113706 Trim27Q62158 513 aa19.89■□□□□ 0.78
Trim39-203ENSMUST00000113706 Btbd11Q6GQW0 1109 aa19.89■□□□□ 0.78
Trim39-203ENSMUST00000113706 Triml2E9PW10 424 aa19.89■□□□□ 0.77
Trim39-203ENSMUST00000113706 Zranb3Q6NZP1 1069 aa19.89■□□□□ 0.77
Trim39-203ENSMUST00000113706 Ppp1r9bQ6R891 817 aaKnown RBP19.89■□□□□ 0.77
Trim39-203ENSMUST00000113706 Col1a2Q01149 1372 aa19.88■□□□□ 0.77
Trim39-203ENSMUST00000113706 Cadps2Q8BYR5 1297 aa19.88■□□□□ 0.77
Trim39-203ENSMUST00000113706 Brd1E9PZ26 1189 aaKnown RBP19.87■□□□□ 0.77
Trim39-203ENSMUST00000113706 Tm6sf1P58749 370 aa19.87■□□□□ 0.77
Trim39-203ENSMUST00000113706 Pdzd9Q9D9M4 266 aa19.87■□□□□ 0.77
Trim39-203ENSMUST00000113706 Tns2Q8CGB6 1400 aa19.87■□□□□ 0.77
Trim39-203ENSMUST00000113706 RgmbQ7TQ33 436 aa19.87■□□□□ 0.77
Trim39-203ENSMUST00000113706 Prkar2bP31324 416 aa19.87■□□□□ 0.77
Trim39-203ENSMUST00000113706 Disp3A3KFU9 1347 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms