RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Tmco5bQ80X59 307 aa14.33□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Dnajc10Q9DC23 793 aa14.33□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Bcl9lQ67FY2 1494 aa14.33□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Abcc12Q80WJ6 1366 aa14.33□□□□□ -0.12
Vamp1-202ENSMUST00000063588 B4galnt3Q6L8S8 986 aa14.32□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Klhdc4Q921I2 584 aa14.32□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Foxp4Q9DBY0 795 aaKnown RBP14.32□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Ecm2Q5FW85 670 aa14.32□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Dzip1Q8BMD2 852 aa14.32□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Aldh1l2Q8K009 923 aa14.32□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Nectin2P32507 530 aa14.31□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Simc1E9Q6E9 1354 aa14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Msh6P54276 1358 aaKnown RBP14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Tnks1bp1P58871 1720 aa14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Ggnbp2Q5SV77 696 aa14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Nol11Q8BJW5 723 aaKnown RBP14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Znf330Q922H9 316 aa14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Dbr1Q923B1 550 aa14.3□□□□□ -0.12
Vamp1-202ENSMUST00000063588 GnpatP98192 678 aa14.29□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Wwc1Q5SXA9 1104 aa14.29□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Dixdc1Q80Y83 711 aa14.29□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Ric3Q8BPM6 367 aa14.29□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Ipo9Q91YE6 1041 aa14.29□□□□□ -0.12
Vamp1-202ENSMUST00000063588 BcorQ8CGN4 1759 aa14.29□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.28□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Prim1P20664 417 aa14.28□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Ppp1r37Q8BKR5 712 aa14.28□□□□□ -0.12
Vamp1-202ENSMUST00000063588 TkfcQ8VC30 578 aa14.28□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Kif24Q6NWW5 1356 aa14.28□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Amotl2Q8K371 772 aa14.27□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Tmc1Q8R4P5 757 aa14.27□□□□□ -0.12
Vamp1-202ENSMUST00000063588 Atf5O70191 283 aa14.26□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Card10P58660 1021 aa14.26□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Atp10bB1AWN4 1474 aa14.25□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Ppp2r3aB2RXC8 1150 aa14.25□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Amigo3Q8C2S7 508 aa14.25□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Marf1Q8BJ34 1730 aaKnown RBP14.25□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Zfp142G5E869 1843 aa14.25□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Col15a1O35206 1367 aa14.25□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Snap23O09044 210 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 SkilQ60665 675 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Nutm1Q8BHP2 1126 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Aox2Q5SGK3 1345 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 1700019A02RikA0A087WPV9 146 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Map7O88735 730 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Pip4k2bQ80XI4 416 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Sv2bQ8BG39 683 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Phf23Q8BSN5 401 aa14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 HnrnpuQ8VEK3 800 aaKnown RBP14.24□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Phlpp2Q8BXA7 1320 aa14.23□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Slit1Q80TR4 1531 aa14.23□□□□□ -0.13
Vamp1-202ENSMUST00000063588 AU019823E9PUQ3 292 aa14.23□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Q3TQI7 289 aaKnown RBP14.23□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Brinp3Q499E0 766 aa14.23□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Senp3Q9EP97 568 aaKnown RBP14.23□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Gm21698A0A087WQP8 267 aa14.22□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Gm21671G3UY31 267 aa14.22□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Rangap1P46061 589 aaKnown RBP14.22□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Cadps2Q8BYR5 1297 aa14.22□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Cetn4Q8K4K1 168 aa14.22□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Ubr2Q6WKZ8 1755 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Cnksr1A2A9K7 700 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Ccdc183A2AJB1 534 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 CrklP47941 303 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Ipo8Q7TMY7 1010 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 OptnQ8K3K8 584 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Cluap1Q8R3P7 413 aa14.21□□□□□ -0.13
Vamp1-202ENSMUST00000063588 Pibf1E9Q6K3 756 aa14.2□□□□□ -0.14
Vamp1-202ENSMUST00000063588 LifrP42703 1092 aa14.2□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Tm6sf1P58749 370 aa14.2□□□□□ -0.14
Vamp1-202ENSMUST00000063588 ZgpatQ8VDM1 511 aa14.2□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Armcx1Q9CX83 456 aa14.2□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Ccdc27Q3V036 639 aa14.19□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Pnpla7A2AJ88 1352 aa14.19□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Trim30dE9PWL0 497 aa14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Brd1E9PZ26 1189 aaKnown RBP14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Gm10471E9Q1C7 252 aa14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Eif4a1P60843 406 aaKnown RBP14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Aifm3Q3TY86 605 aa14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Cgnl1Q6AW69 1298 aa14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Tns2Q8CGB6 1400 aa14.18□□□□□ -0.14
Vamp1-202ENSMUST00000063588 HdgfP51859 237 aaKnown RBP14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Chpf2Q3UU43 768 aa14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Ddx17Q501J6 650 aaKnown RBP14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Trim27Q62158 513 aa14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 ThemisQ8BGW0 636 aa14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Cyp2d12Q8BVD2 504 aa14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Ak7Q9D2H2 614 aa14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 ScaperF8VQ70 1398 aaKnown RBP14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Col1a2Q01149 1372 aa14.17□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Ppm1gQ61074 542 aa14.16□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Aldh8a1Q8BH00 487 aa14.16□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Plekhd1B2RPU2 505 aa14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Btbd11Q6GQW0 1109 aa14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 KnstrnQ9D9Z1 312 aaKnown RBP14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Fgd1P52734 960 aa14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 CoilQ5SU73 570 aa14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Fam83gQ5SWY7 812 aa14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 PsapQ61207 557 aaKnown RBP14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Fbxo41Q6NS60 873 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms