RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Pard3Q99NH2 1333 aa15.28■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Dcaf11Q91VU6 549 aa15.27■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Cacna1sQ02789 1880 aa15.27■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Erich4Q3UNU4 136 aa15.27■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Ppp1r15aP17564 657 aa15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Nkx1-2P42580 305 aa15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Lrrc59Q922Q8 307 aaKnown RBP15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Sart3Q9JLI8 962 aaKnown RBP15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Kdm6aO70546 1401 aa15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 GnpatP98192 678 aa15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Pdlim2Q8R1G6 349 aa15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Pdia4P08003 638 aaKnown RBP15.26■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Cnga1P29974 684 aa15.25■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Card10P58660 1021 aa15.25■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Dixdc1Q80Y83 711 aa15.25■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Cdhr2E9Q7P9 1308 aa15.25■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Clcn1Q64347 994 aa15.25■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Cntnap1O54991 1385 aa15.24■□□□□ 0.03
Upk3b-201ENSMUST00000062606 1700017N19RikA0A087WPJ1 469 aa15.24■□□□□ 0.03
Upk3b-201ENSMUST00000062606 ErmnQ5EBJ4 281 aa15.24■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Bcl2l12Q9D3J3 255 aa15.24■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Tnrc6cQ3UHC0 1690 aaKnown RBP15.24■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Lrp6O88572 1613 aa15.24■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Rangap1P46061 589 aaKnown RBP15.23■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Ripk4Q9ERK0 786 aa15.23■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Parp14Q2EMV9 1817 aa15.21■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Mast2Q60592 1734 aa15.21■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Mre11Q61216 706 aa15.21■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Dzip1Q8BMD2 852 aa15.21■□□□□ 0.03
Upk3b-201ENSMUST00000062606 Uhrf1bp1lA2RSJ4 1457 aa15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Nup153E9Q3G8 1462 aaKnown RBP15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Mst1rQ62190 1378 aa15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Kiaa1107Q80TK0 1369 aa15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Qtrt2B8ZXI1 415 aa15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Arhgef1Q61210 920 aaKnown RBP15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Uhrf1bp1B2KF50 1429 aa15.2■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Simc1E9Q6E9 1354 aa15.19■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Fmnl2A2APV2 1086 aa15.19■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Ly75Q60767 1723 aa15.19■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Prkrip1Q9CWV6 186 aaKnown RBP15.19■□□□□ 0.02
Upk3b-201ENSMUST00000062606 HdgfP51859 237 aaKnown RBP15.18■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Slc5a4bQ91ZP4 660 aa15.18■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Bcl11bQ99PV8 884 aa15.18■□□□□ 0.02
Upk3b-201ENSMUST00000062606 P2rx7Q9Z1M0 595 aa15.17■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Ubr2Q6WKZ8 1755 aa15.17■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Hoxc9P09633 260 aa15.17■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Arhgap4B1AUY3 965 aa15.17■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Dnai1Q8C0M8 701 aa15.17■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Ahnak2E9PYB0 1738 aaKnown RBP15.16■□□□□ 0.02
Upk3b-201ENSMUST00000062606 E2f4Q8R0K9 410 aa15.16■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Fchsd2Q3USJ8 740 aa15.16■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Rad21Q61550 635 aaKnown RBP15.16■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Kank1E9Q238 1360 aa15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Fam114a1Q9D281 569 aa15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Map4k4P97820 1233 aaKnown RBP15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Ddx17Q501J6 650 aaKnown RBP15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Kiaa0753Q6A000 959 aa15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Nol11Q8BJW5 723 aaKnown RBP15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Rsph6aQ8CDR2 708 aa15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Emilin2Q8K482 1074 aa15.15■□□□□ 0.02
Upk3b-201ENSMUST00000062606 Erbb3Q61526 1339 aa15.14■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Gm21190A0A0G2JGJ6 266 aa15.14■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Spryd3E9Q9B3 442 aa15.13■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Amotl2Q8K371 772 aa15.13■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Akap11E9Q777 1895 aa15.13■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Lmod3E9QA62 571 aa15.13■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Tns2Q8CGB6 1400 aa15.12■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Ltbp1Q8CG19 1712 aa15.12■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Rab11fip3Q8CHD8 1047 aa15.12■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Ciz1Q8VEH2 845 aa15.12■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Nckap5lQ6GQX2 1323 aa15.11■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Col15a1O35206 1367 aa15.11■□□□□ 0.01
Upk3b-201ENSMUST00000062606 TnikP83510 1323 aa15.11■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Vps33bP59016 617 aa15.11■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Abca3Q8R420 1704 aa15.11■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Zeb2Q9R0G7 1215 aa15.1■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Cypt2Q6P924 180 aa15.1■□□□□ 0.01
Upk3b-201ENSMUST00000062606 TatQ8QZR1 454 aa15.1■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Rpgrip1lQ8CG73 1264 aa15.09■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Dnajc10Q9DC23 793 aa15.09■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Dmrt2Q8BG36 561 aa15.09■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Ppm1gQ61074 542 aa15.09■□□□□ 0.01
Upk3b-201ENSMUST00000062606 B4galnt3Q6L8S8 986 aa15.09■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Eif4a2P10630 407 aa15.08■□□□□ 0.01
Upk3b-201ENSMUST00000062606 Plekhd1B2RPU2 505 aa15.08■□□□□ 0
Upk3b-201ENSMUST00000062606 Zscan21Q07231 555 aa15.08■□□□□ 0
Upk3b-201ENSMUST00000062606 Arid3aQ62431 601 aa15.08■□□□□ 0
Upk3b-201ENSMUST00000062606 GsdmaQ9EST1 446 aa15.08■□□□□ 0
Upk3b-201ENSMUST00000062606 Cabp4Q8VHC5 271 aa15.08■□□□□ 0
Upk3b-201ENSMUST00000062606 Usp19Q3UJD6 1360 aa15.07■□□□□ 0
Upk3b-201ENSMUST00000062606 Erbb4Q61527 1308 aa15.07■□□□□ 0
Upk3b-201ENSMUST00000062606 Gm21698A0A087WQP8 267 aa15.06■□□□□ 0
Upk3b-201ENSMUST00000062606 Gm21671G3UY31 267 aa15.06■□□□□ 0
Upk3b-201ENSMUST00000062606 NudcO35685 332 aaKnown RBP15.06■□□□□ 0
Upk3b-201ENSMUST00000062606 TkfcQ8VC30 578 aa15.05■□□□□ 0
Upk3b-201ENSMUST00000062606 Sema6bO54951 886 aa15.05■□□□□ -0
Upk3b-201ENSMUST00000062606 Shank3Q4ACU6 1730 aa15.05■□□□□ -0
Upk3b-201ENSMUST00000062606 Casz1Q9CWL2 1761 aa15.05■□□□□ -0
Upk3b-201ENSMUST00000062606 InhbeO08717 350 aa15.04■□□□□ -0
Upk3b-201ENSMUST00000062606 Prdm4Q80V63 803 aa15.04■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms