RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	SAP155	P43612	1002 aa		4.97	□□□□□ -1.61
snR17a	snR17a	NUT1	P53114	1132 aa		4.97	□□□□□ -1.61
snR17a	snR17a	UTP22	P53254	1237 aa	Predicted RBP	4.97	□□□□□ -1.61
snR17a	snR17a	MEC3	Q02574	474 aa		4.97	□□□□□ -1.61
snR17a	snR17a	NOC3	Q07896	663 aa	Predicted RBP	4.97	□□□□□ -1.61
snR17a	snR17a	INP54	Q08227	384 aa	Known RBP	4.97	□□□□□ -1.61
snR17a	snR17a	NSI1	Q12457	570 aa		4.97	□□□□□ -1.61
snR17a	snR17a	CIC1	P38779	376 aa	Known RBP	4.96	□□□□□ -1.62
snR17a	snR17a	RVS167	P39743	482 aa	Known RBP	4.96	□□□□□ -1.62
snR17a	snR17a	DOT1	Q04089	582 aa	Known RBP	4.96	□□□□□ -1.62
snR17a	snR17a	MCM5	P29496	775 aa	Known RBP	4.95	□□□□□ -1.62
snR17a	snR17a	DUR3	P33413	735 aa		4.95	□□□□□ -1.62
snR17a	snR17a	SHU2	P38957	223 aa		4.95	□□□□□ -1.62
snR17a	snR17a	MMM1	P41800	426 aa		4.95	□□□□□ -1.62
snR17a	snR17a	RPS0B	P46654	252 aa	Known RBP	4.95	□□□□□ -1.62
snR17a	snR17a	YAF9	P53930	226 aa		4.95	□□□□□ -1.62
snR17a	snR17a	BRE4	Q07660	1125 aa		4.95	□□□□□ -1.62
snR17a	snR17a	YOR059C	Q08448	450 aa	Known RBP	4.95	□□□□□ -1.62
snR17a	snR17a	FRT1	Q99332	602 aa		4.95	□□□□□ -1.62
snR17a	snR17a	GPT2	P36148	743 aa		4.94	□□□□□ -1.62
snR17a	snR17a	ARL1	P38116	183 aa	Known RBP	4.94	□□□□□ -1.62
snR17a	snR17a	REI1	P38344	393 aa	Predicted RBP	4.94	□□□□□ -1.62
snR17a	snR17a	CIT3	P43635	486 aa		4.94	□□□□□ -1.62
snR17a	snR17a	YKL077W	P36081	392 aa		4.93	□□□□□ -1.62
snR17a	snR17a	YHL050C	P38721	697 aa		4.93	□□□□□ -1.62
snR17a	snR17a	YHR219W	P38900	624 aa		4.93	□□□□□ -1.62
snR17a	snR17a	YCS4	Q06156	1176 aa		4.93	□□□□□ -1.62
snR17a	snR17a	MAG2	Q06436	670 aa	Known RBP	4.93	□□□□□ -1.62
snR17a	snR17a	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
snR17a	snR17a	GCD6	P32501	712 aa	Known RBP	4.92	□□□□□ -1.62
snR17a	snR17a	STM1	P39015	273 aa	Known RBP	4.92	□□□□□ -1.62
snR17a	snR17a	CTH1	P47976	325 aa		4.92	□□□□□ -1.62
snR17a	snR17a	MON1	P53129	644 aa		4.92	□□□□□ -1.62
snR17a	snR17a	SSF1	P38789	453 aa	Predicted RBP	4.91	□□□□□ -1.62
snR17a	snR17a	IRC24	P40580	263 aa		4.91	□□□□□ -1.62
snR17a	snR17a	RCM1	P53972	490 aa		4.91	□□□□□ -1.62
snR17a	snR17a	AVO1	Q08236	1176 aa		4.91	□□□□□ -1.62
snR17a	snR17a	RPS4A	P0CX35	261 aa	Known RBP	4.9	□□□□□ -1.63
snR17a	snR17a	RPS4B	P0CX36	261 aa	Known RBP	4.9	□□□□□ -1.63
snR17a	snR17a	VPS35	P34110	944 aa		4.9	□□□□□ -1.63
snR17a	snR17a	WHI3	P34761	661 aa	Known RBP	4.9	□□□□□ -1.63
snR17a	snR17a	CAB3	P36076	571 aa		4.9	□□□□□ -1.63
snR17a	snR17a	ALG6	Q12001	544 aa	Known RBP	4.9	□□□□□ -1.63
snR17a	snR17a	KAR2	P16474	682 aa	Known RBP	4.89	□□□□□ -1.63
snR17a	snR17a	PPX1	P38698	397 aa		4.89	□□□□□ -1.63
snR17a	snR17a	MSH4	P40965	878 aa	Predicted RBP	4.89	□□□□□ -1.63
snR17a	snR17a	AVT1	P47082	602 aa		4.89	□□□□□ -1.63
snR17a	snR17a	NNK1	P36003	928 aa		4.88	□□□□□ -1.63
snR17a	snR17a	MNN4	P36044	1178 aa		4.88	□□□□□ -1.63
snR17a	snR17a	MTR4	P47047	1073 aa	Known RBP	4.88	□□□□□ -1.63
snR17a	snR17a	YGR045C	P53229	120 aa		4.88	□□□□□ -1.63
snR17a	snR17a	MSC6	Q08818	692 aa	Known RBP	4.88	□□□□□ -1.63
snR17a	snR17a	OXR1	Q08952	273 aa		4.88	□□□□□ -1.63
snR17a	snR17a	GCD1	P09032	578 aa	Predicted RBP	4.87	□□□□□ -1.63
snR17a	snR17a	NFS1	P25374	497 aa		4.87	□□□□□ -1.63
snR17a	snR17a	SMY2	P32909	740 aa	Known RBP	4.87	□□□□□ -1.63
snR17a	snR17a	ALT1	P52893	592 aa		4.87	□□□□□ -1.63
snR17a	snR17a	ELA1	P53861	379 aa	Predicted RBP	4.87	□□□□□ -1.63
snR17a	snR17a	MDG1	P53885	366 aa		4.87	□□□□□ -1.63
snR17a	snR17a	SDH1	Q00711	640 aa		4.87	□□□□□ -1.63
snR17a	snR17a	PHO4	P07270	312 aa	Known RBP	4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-DR6	P0CX70	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-ER1	P0CX71	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-LR2	P0CX72	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-PL	P0CX73	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-JR1	P0CX74	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-LR3	P0CX75	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-ML2	P0CX76	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	SEC20	P28791	383 aa		4.86	□□□□□ -1.63
snR17a	snR17a	PRP40	P33203	583 aa	Known RBP	4.86	□□□□□ -1.63
snR17a	snR17a	ATG14	P38270	344 aa		4.86	□□□□□ -1.63
snR17a	snR17a	EXO5	P38289	585 aa		4.86	□□□□□ -1.63
snR17a	snR17a	NOG1	Q02892	647 aa	Known RBP	4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-GR1	Q12085	440 aa		4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.86	□□□□□ -1.63
snR17a	snR17a	TY1A-OL	Q92392	440 aa	Known RBP	4.86	□□□□□ -1.63
snR17a	snR17a	HSE1	P38753	452 aa		4.85	□□□□□ -1.63
snR17a	snR17a	THI12	P42883	340 aa		4.85	□□□□□ -1.63
snR17a	snR17a	THI5	P43534	340 aa		4.85	□□□□□ -1.63
snR17a	snR17a	THI11	P47183	340 aa		4.85	□□□□□ -1.63
snR17a	snR17a	AOS1	Q06624	347 aa		4.85	□□□□□ -1.63
snR17a	snR17a	THI13	Q07748	340 aa		4.85	□□□□□ -1.63
snR17a	snR17a	ADP1	P25371	1049 aa		4.84	□□□□□ -1.63
snR17a	snR17a	SLD2	P34252	453 aa		4.84	□□□□□ -1.63
snR17a	snR17a	SQT1	P35184	431 aa		4.84	□□□□□ -1.63
snR17a	snR17a	YAR028W	P39548	234 aa		4.84	□□□□□ -1.63
snR17a	snR17a	OYE3	P41816	400 aa	Predicted RBP	4.84	□□□□□ -1.63
snR17a	snR17a	SLS1	P42900	643 aa		4.84	□□□□□ -1.63
snR17a	snR17a	RSM26	P47141	266 aa		4.84	□□□□□ -1.63
snR17a	snR17a	ECL1	P48235	211 aa		4.84	□□□□□ -1.63
snR17a	snR17a	PEX13	P80667	386 aa		4.84	□□□□□ -1.63
snR17a	snR17a	DAL4	Q04895	635 aa		4.84	□□□□□ -1.63
snR17a	snR17a	LAP2	Q10740	671 aa		4.84	□□□□□ -1.63
snR17a	snR17a	VMA4	P22203	233 aa	Known RBP	4.83	□□□□□ -1.64
snR17a	snR17a	MSH3	P25336	1018 aa		4.83	□□□□□ -1.64
snR17a	snR17a	MET4	P32389	672 aa		4.83	□□□□□ -1.64
snR17a	snR17a	ELM1	P32801	640 aa		4.83	□□□□□ -1.64
snR17a	snR17a	NEM1	P38757	446 aa		4.83	□□□□□ -1.64
snR17a	snR17a	TRE1	Q08919	783 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms